RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 FAM200AQ8TCP9 573 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 DDX12PQ92771 950 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 LPPQ93052 612 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.98□□□□□ -1.13
MSH6-209ENST00000538136 PHF20Q9BVI0 1012 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 IKZF4Q9H2S9 585 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 CACNG4Q9UBN1 327 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 PNMA2Q9UL42 364 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 KDM3BQ7LBC6 1761 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 AHCTF1Q8WYP5 2266 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 SCAMP3O14828 347 aaKnown RBP7.98□□□□□ -1.13
MSH6-209ENST00000538136 N4BP3O15049 544 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 SEPT4O43236 478 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 LPXNO60711 386 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 DKC1O60832 514 aaKnown RBP eCLIP7.98□□□□□ -1.13
MSH6-209ENST00000538136 BMP15O95972 392 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 AOPEPQ8N6M6 819 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 CLEC4DQ8WXI8 215 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 TIMM13Q9Y5L4 95 aaPredicted RBP7.98□□□□□ -1.13
MSH6-209ENST00000538136 MRPL42Q9Y6G3 142 aaKnown RBP7.98□□□□□ -1.13
MSH6-209ENST00000538136 CD52P31358 61 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 PSEN2P49810 448 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 ZNF165P49910 485 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 GRIK4Q16099 956 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 MAPK6Q16659 721 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 METTL7BQ6UX53 244 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 CATSPER3Q86XQ3 398 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 ZNF592Q92610 1267 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 NACA2Q9H009 215 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 RFX7Q2KHR2 1363 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 ZNF536O15090 1300 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 GOLGA6L3A6NEY3 463 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 MED24O75448 989 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 NPM3O75607 178 aaKnown RBP7.98□□□□□ -1.13
MSH6-209ENST00000538136 CCDC192P0DO97 292 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 LLGL1Q15334 1064 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 ODF2Q5BJF6 829 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 FAM26FQ5R3K3 315 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 TMED8Q6PL24 325 aaPredicted RBP7.98□□□□□ -1.13
MSH6-209ENST00000538136 LINC00301Q8NCQ3 95 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 GTF3C2Q8WUA4 911 aaPredicted RBP7.98□□□□□ -1.13
MSH6-209ENST00000538136 ZBTB9Q96C00 473 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 FAM213AQ9BRX8 229 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 JADE2Q9NQC1 790 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 PTPN22Q9Y2R2 807 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 PCDHA5Q9Y5H7 936 aa7.98□□□□□ -1.13
MSH6-209ENST00000538136 KNTC1P50748 2209 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 ATRNL1Q5VV63 1379 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 TMCO5BA8MYB1 307 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 PSMA7O14818 248 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 HIP1RO75146 1068 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 SNAI1O95863 264 aaPredicted RBP7.97□□□□□ -1.13
MSH6-209ENST00000538136 CTGFP29279 349 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 ACLYP53396 1101 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 YARSP54577 528 aaKnown RBP7.97□□□□□ -1.13
MSH6-209ENST00000538136 CUL4BQ13620 913 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 TSGA10IPQ3SY00 556 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 NOL9Q5SY16 702 aaKnown RBP7.97□□□□□ -1.13
MSH6-209ENST00000538136 ZNF697Q5TEC3 545 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 STXBP4Q6ZWJ1 553 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 MTRQ99707 1265 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 DEF6Q9H4E7 631 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 SYNCQ9H7C4 482 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.97□□□□□ -1.13
MSH6-209ENST00000538136 SBF2Q86WG5 1849 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 GOLGA6L6A8MZA4 724 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 CSF2RAP15509 400 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 RNASE9P60153 205 aaKnown RBP7.97□□□□□ -1.13
MSH6-209ENST00000538136 UBE2HP62256 183 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 ITGB3BPQ13352 177 aaPredicted RBP7.97□□□□□ -1.13
MSH6-209ENST00000538136 DRP2Q13474 957 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 UGCGQ16739 394 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 ANO6Q4KMQ2 910 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 NFRKBQ6P4R8 1299 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 ZNF354CQ86Y25 554 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 ARNTL2Q8WYA1 636 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 BHMTQ93088 406 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 MTG1Q9BT17 334 aaPredicted RBP7.97□□□□□ -1.13
MSH6-209ENST00000538136 HTATIP2Q9BUP3 242 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 IMPG2Q9BZV3 1241 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 I3L4J1 428 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 CLDN3O15551 220 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 TMEM191BP0C7N4 346 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 GCFC2P16383 781 aaKnown RBP7.97□□□□□ -1.13
MSH6-209ENST00000538136 TM4SF4P48230 202 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 RESTQ13127 1097 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 SLC39A14Q15043 492 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 LUZP1Q86V48 1076 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 ZNF579Q8NAF0 562 aaKnown RBP7.97□□□□□ -1.13
MSH6-209ENST00000538136 DBF4BQ8NFT6 615 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 NLRC4Q9NPP4 1024 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 GINM1Q9NU53 330 aa7.97□□□□□ -1.13
MSH6-209ENST00000538136 GRXCR1A8MXD5 290 aa7.96□□□□□ -1.13
MSH6-209ENST00000538136 TISP43B9A030 160 aa7.96□□□□□ -1.13
MSH6-209ENST00000538136 BRD1O95696 1058 aa7.96□□□□□ -1.13
MSH6-209ENST00000538136 MBD3O95983 291 aa7.96□□□□□ -1.13
MSH6-209ENST00000538136 TPM1P09493 284 aa7.96□□□□□ -1.13
MSH6-209ENST00000538136 SPATA31D3P0C874 917 aa7.96□□□□□ -1.13
MSH6-209ENST00000538136 PAK2Q13177 524 aa7.96□□□□□ -1.13
MSH6-209ENST00000538136 IER5Q5VY09 327 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms