RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 NHSQ6T4R5 1651 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 ENTPD3O75355 529 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 FECHP22830 423 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 KCTD16Q68DU8 428 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 IQCEQ6IPM2 695 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 ZNF746Q6NUN9 644 aaPredicted RBP9.53□□□□□ -0.88
UBE3B-208ENST00000538070 GBP6Q6ZN66 633 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.53□□□□□ -0.88
UBE3B-208ENST00000538070 GMCL1Q96IK5 515 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 FRMD4BQ9Y2L6 1034 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 SBF2Q86WG5 1849 aa9.53□□□□□ -0.88
UBE3B-208ENST00000538070 NPEPPSP55786 919 aa9.52□□□□□ -0.88
UBE3B-208ENST00000538070 SPIRE1Q08AE8 756 aa9.52□□□□□ -0.88
UBE3B-208ENST00000538070 TUBB2AQ13885 445 aa9.52□□□□□ -0.88
UBE3B-208ENST00000538070 ZCWPW2Q504Y3 356 aa9.52□□□□□ -0.88
UBE3B-208ENST00000538070 FAM102BQ5T8I3 360 aa9.52□□□□□ -0.88
UBE3B-208ENST00000538070 PLA2G4FQ68DD2 849 aa9.52□□□□□ -0.88
UBE3B-208ENST00000538070 ZNF772Q68DY9 489 aaPredicted RBP9.52□□□□□ -0.88
UBE3B-208ENST00000538070 ALKBH5Q6P6C2 394 aaKnown RBP9.52□□□□□ -0.88
UBE3B-208ENST00000538070 ZNF571Q7Z3V5 609 aaPredicted RBP9.52□□□□□ -0.88
UBE3B-208ENST00000538070 GLYCTKQ8IVS8 523 aa9.52□□□□□ -0.88
UBE3B-208ENST00000538070 SUPT20HQ8NEM7 779 aa9.52□□□□□ -0.88
UBE3B-208ENST00000538070 CEP63Q96MT8 703 aa9.52□□□□□ -0.88
UBE3B-208ENST00000538070 TUBB2BQ9BVA1 445 aa9.52□□□□□ -0.88
UBE3B-208ENST00000538070 TEKT3Q9BXF9 490 aa9.52□□□□□ -0.88
UBE3B-208ENST00000538070 ACBD3Q9H3P7 528 aa9.52□□□□□ -0.88
UBE3B-208ENST00000538070 AJAP1Q9UKB5 411 aaPredicted RBP9.52□□□□□ -0.88
UBE3B-208ENST00000538070 A0A1W2PQJ5 194 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 HIP1RO75146 1068 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 EYA4O95677 639 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 GNA14O95837 355 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 HOXD13P35453 343 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 PRELPP51888 382 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 CXCL9Q07325 125 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 SPP2Q13103 211 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 MAP9Q49MG5 647 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 PAPD7Q5XG87 772 aaKnown RBP9.52□□□□□ -0.89
UBE3B-208ENST00000538070 OTOP1Q7RTM1 612 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 FAM151AQ8WW52 585 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 VCPKMTQ9H867 229 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 FAM204AQ9H8W3 233 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 EPB41L5Q9HCM4 733 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 COL24A1Q17RW2 1714 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 MYH7BA7E2Y1 1941 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 PEX10O60683 326 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 PON1P27169 355 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 GGCXP38435 758 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 GCLMP48507 274 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 TRADDQ15628 312 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 HGSNATQ68CP4 663 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 DAAM2Q86T65 1068 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 CREG2Q8IUH2 290 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 GMCL1P1Q8NEA9 526 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 SELENOOQ9BVL4 669 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 TMX2Q9Y320 296 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 PCDHA2Q9Y5H9 948 aa9.52□□□□□ -0.89
UBE3B-208ENST00000538070 TAF1LQ8IZX4 1826 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 RNF40O75150 1001 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 HNRNPH2P55795 449 aaKnown RBP9.51□□□□□ -0.89
UBE3B-208ENST00000538070 TNIP1Q15025 636 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 MSANTD4Q8NCY6 345 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 BCCIPQ9P287 314 aaKnown RBP eCLIP9.51□□□□□ -0.89
UBE3B-208ENST00000538070 HERC5Q9UII4 1024 aaKnown RBP9.51□□□□□ -0.89
UBE3B-208ENST00000538070 VAV3Q9UKW4 847 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 NFU1Q9UMS0 254 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 WNT10BO00744 389 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 SLC16A4O15374 487 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 COPB2P35606 906 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 PEX3P56589 373 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 MTMR2Q13614 643 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 RPS6KA1Q15418 735 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 XKR9Q5GH70 373 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 PADI6Q6TGC4 694 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 LEKR1Q6ZMV7 388 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 VPS36Q86VN1 386 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 ZSWIM2Q8NEG5 633 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 ZKSCAN4Q969J2 545 aaPredicted RBP9.51□□□□□ -0.89
UBE3B-208ENST00000538070 TAAR1Q96RJ0 339 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 TLR10Q9BXR5 811 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 EHMT1Q9H9B1 1298 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 ACP6Q9NPH0 428 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 KCNH7Q9NS40 1196 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 TYW1Q9NV66 732 aaKnown RBP9.51□□□□□ -0.89
UBE3B-208ENST00000538070 MYO3BQ8WXR4 1341 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 HARSP12081 509 aaKnown RBP9.51□□□□□ -0.89
UBE3B-208ENST00000538070 CAP2P40123 477 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 HDLBPQ00341 1268 aaKnown RBP9.51□□□□□ -0.89
UBE3B-208ENST00000538070 SF3A3Q12874 501 aaKnown RBP eCLIP9.51□□□□□ -0.89
UBE3B-208ENST00000538070 Q4G0T1 1027 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 CFAP221Q4G0U5 840 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 MUM1L1Q5H9M0 696 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 KLHDC7AQ5VTJ3 777 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 SAAL1Q96ER3 474 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 DNAJC12Q9UKB3 198 aa9.51□□□□□ -0.89
UBE3B-208ENST00000538070 ZBTB22O15209 634 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 HEXIM1O94992 359 aaKnown RBP9.5□□□□□ -0.89
UBE3B-208ENST00000538070 TCP1P17987 556 aaKnown RBP9.5□□□□□ -0.89
UBE3B-208ENST00000538070 PSMC2P35998 433 aaKnown RBP9.5□□□□□ -0.89
UBE3B-208ENST00000538070 SLC18A3Q16572 532 aa9.5□□□□□ -0.89
UBE3B-208ENST00000538070 FIGNQ5HY92 759 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms