RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 FUCA2Q9BTY2 467 aa17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 SMARCAD1Q9H4L7 1026 aa17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 XPNPEP3Q9NQH7 507 aa17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 ANKEF1Q9NU02 776 aa17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 DDX20Q9UHI6 824 aaKnown RBP17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 HOOK1Q9UJC3 728 aaKnown RBP17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 Q9Y3F1 56 aa17.43■□□□□ 0.38
SFSWAP-206ENST00000537582 BRCA2P51587 3418 aa17.42■□□□□ 0.38
SFSWAP-206ENST00000537582 ADAMTS4O75173 837 aa17.42■□□□□ 0.38
SFSWAP-206ENST00000537582 MYCNP04198 464 aaPredicted RBP17.42■□□□□ 0.38
SFSWAP-206ENST00000537582 RPN1P04843 607 aaKnown RBP17.42■□□□□ 0.38
SFSWAP-206ENST00000537582 MYL3P08590 195 aa17.42■□□□□ 0.38
SFSWAP-206ENST00000537582 SOX10P56693 466 aa17.42■□□□□ 0.38
SFSWAP-206ENST00000537582 GJA9P57773 515 aa17.42■□□□□ 0.38
SFSWAP-206ENST00000537582 CHMP4BP1P59074 171 aa17.42■□□□□ 0.38
SFSWAP-206ENST00000537582 TRAPPC12Q8WVT3 735 aa17.42■□□□□ 0.38
SFSWAP-206ENST00000537582 KAT2BQ92831 832 aa17.42■□□□□ 0.38
SFSWAP-206ENST00000537582 CEP170P1Q96L14 293 aa17.42■□□□□ 0.38
SFSWAP-206ENST00000537582 REEP2Q9BRK0 252 aa17.42■□□□□ 0.38
SFSWAP-206ENST00000537582 UPF3AQ9H1J1 476 aaKnown RBP17.42■□□□□ 0.38
SFSWAP-206ENST00000537582 ZBTB42B2RXF5 422 aa17.41■□□□□ 0.38
SFSWAP-206ENST00000537582 DKC1O60832 514 aaKnown RBP eCLIP17.41■□□□□ 0.38
SFSWAP-206ENST00000537582 IDEP14735 1019 aa17.41■□□□□ 0.38
SFSWAP-206ENST00000537582 CTCFP49711 727 aaPredicted RBP17.41■□□□□ 0.38
SFSWAP-206ENST00000537582 TYRO3Q06418 890 aa17.41■□□□□ 0.38
SFSWAP-206ENST00000537582 GIT2Q14161 759 aa17.41■□□□□ 0.38
SFSWAP-206ENST00000537582 MTFR1Q15390 333 aa17.41■□□□□ 0.38
SFSWAP-206ENST00000537582 KMT5BQ4FZB7 885 aa17.41■□□□□ 0.38
SFSWAP-206ENST00000537582 NT5DC1Q5TFE4 455 aa17.41■□□□□ 0.38
SFSWAP-206ENST00000537582 KCTD17Q8N5Z5 321 aa17.41■□□□□ 0.38
SFSWAP-206ENST00000537582 ATP8B4Q8TF62 1192 aa17.41■□□□□ 0.38
SFSWAP-206ENST00000537582 CCDC34Q96HJ3 373 aa17.41■□□□□ 0.38
SFSWAP-206ENST00000537582 CEP89Q96ST8 783 aa17.41■□□□□ 0.38
SFSWAP-206ENST00000537582 UNC93B1Q9H1C4 597 aa17.41■□□□□ 0.38
SFSWAP-206ENST00000537582 CYP26B1Q9NR63 512 aa17.41■□□□□ 0.38
SFSWAP-206ENST00000537582 ERAP1Q9NZ08 941 aa17.41■□□□□ 0.38
SFSWAP-206ENST00000537582 H3BRB1 525 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 LETM1O95202 739 aaPredicted RBP17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 KRT18P05783 430 aaKnown RBP17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 XRCC6P12956 609 aaKnown RBP eCLIP17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 CPT1AP50416 773 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 ZNF445P59923 1031 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 AMPD3Q01432 767 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 SLC9C1Q4G0N8 1177 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 GNASQ5JWF2 1037 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 LHX8Q68G74 356 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 CTU1Q7Z7A3 348 aaKnown RBP17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 SMYD4Q8IYR2 804 aaPredicted RBP17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 CCDC43Q96MW1 224 aaKnown RBP17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 TUT1Q9H6E5 874 aaKnown RBP17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 HMX1Q9NP08 348 aaPredicted RBP17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 GPRC5CQ9NQ84 441 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 TRPC6Q9Y210 931 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 ARID2Q68CP9 1835 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 SFI1A8K8P3 1242 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 SMC2O95347 1197 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 F2P00734 622 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 MAPK7Q13164 816 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 TARBP2Q15633 366 aaKnown RBP17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 DPCR1Q3MIW9 517 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 CNNM4Q6P4Q7 775 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 SASS6Q6UVJ0 657 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 OTUD6AQ7L8S5 288 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 GAS2L3Q86XJ1 694 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 DAW1Q8N136 415 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 NIFKQ9BYG3 293 aaKnown RBP17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 FGFBP2Q9BYJ0 223 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 ZHX3Q9H4I2 956 aa17.4■□□□□ 0.38
SFSWAP-206ENST00000537582 MYH9P35579 1960 aaKnown RBP17.39■□□□□ 0.37
SFSWAP-206ENST00000537582 HIP1RO75146 1068 aa17.39■□□□□ 0.37
SFSWAP-206ENST00000537582 IGBP1P78318 339 aa17.39■□□□□ 0.37
SFSWAP-206ENST00000537582 PURAQ00577 322 aaKnown RBP17.39■□□□□ 0.37
SFSWAP-206ENST00000537582 MORC3Q14149 939 aa17.39■□□□□ 0.37
SFSWAP-206ENST00000537582 LRSAM1Q6UWE0 723 aa17.39■□□□□ 0.37
SFSWAP-206ENST00000537582 CXCL17Q6UXB2 119 aa17.39■□□□□ 0.37
SFSWAP-206ENST00000537582 C11orf57Q6ZUT1 292 aaPredicted RBP17.39■□□□□ 0.37
SFSWAP-206ENST00000537582 GLIS3Q8NEA6 775 aa17.39■□□□□ 0.37
SFSWAP-206ENST00000537582 BBXQ8WY36 941 aaPredicted RBP17.39■□□□□ 0.37
SFSWAP-206ENST00000537582 XPNPEP1Q9NQW7 623 aa17.39■□□□□ 0.37
SFSWAP-206ENST00000537582 NRBP2Q9NSY0 501 aa17.39■□□□□ 0.37
SFSWAP-206ENST00000537582 GDAQ9Y2T3 454 aa17.39■□□□□ 0.37
SFSWAP-206ENST00000537582 MYL1P05976 194 aa17.38■□□□□ 0.37
SFSWAP-206ENST00000537582 INSRRP14616 1297 aa17.38■□□□□ 0.37
SFSWAP-206ENST00000537582 SLC26A2P50443 739 aa17.38■□□□□ 0.37
SFSWAP-206ENST00000537582 COASYQ13057 564 aa17.38■□□□□ 0.37
SFSWAP-206ENST00000537582 UNC13DQ70J99 1090 aa17.38■□□□□ 0.37
SFSWAP-206ENST00000537582 KLHDC9Q8NEP7 349 aa17.38■□□□□ 0.37
SFSWAP-206ENST00000537582 FAM167AQ96KS9 214 aa17.38■□□□□ 0.37
SFSWAP-206ENST00000537582 GSDMAQ96QA5 445 aa17.38■□□□□ 0.37
SFSWAP-206ENST00000537582 LRRC27Q9C0I9 530 aa17.38■□□□□ 0.37
SFSWAP-206ENST00000537582 PANK4Q9NVE7 773 aa17.38■□□□□ 0.37
SFSWAP-206ENST00000537582 TBC1D7Q9P0N9 293 aa17.38■□□□□ 0.37
SFSWAP-206ENST00000537582 ZNF215Q9UL58 517 aaPredicted RBP17.38■□□□□ 0.37
SFSWAP-206ENST00000537582 GUCY2CP25092 1073 aa17.37■□□□□ 0.37
SFSWAP-206ENST00000537582 NKX3-2P78367 333 aa17.37■□□□□ 0.37
SFSWAP-206ENST00000537582 EHHADHQ08426 723 aa17.37■□□□□ 0.37
SFSWAP-206ENST00000537582 DRP2Q13474 957 aa17.37■□□□□ 0.37
SFSWAP-206ENST00000537582 HIC1Q14526 733 aa17.37■□□□□ 0.37
SFSWAP-206ENST00000537582 GSE1Q14687 1217 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms