RNA–Protein interactions for RNA: ENST00000536805.5

PTCD2-211, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-211ENST00000536805 BCCIPQ9P287 314 aaKnown RBP eCLIP13.18□□□□□ -0.3
PTCD2-211ENST00000536805 KIAA1024Q9UPX6 916 aa13.18□□□□□ -0.3
PTCD2-211ENST00000536805 GTPBP10A4D1E9 387 aaKnown RBP13.17□□□□□ -0.3
PTCD2-211ENST00000536805 DNM1LO00429 736 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 TTI1O43156 1089 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 CALUO43852 315 aaPredicted RBP13.17□□□□□ -0.3
PTCD2-211ENST00000536805 KIF1CO43896 1103 aaKnown RBP13.17□□□□□ -0.3
PTCD2-211ENST00000536805 NUDT17P0C025 328 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 XRCC5P13010 732 aaKnown RBP13.17□□□□□ -0.3
PTCD2-211ENST00000536805 ITGA4P13612 1032 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 FERP16591 822 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 TM4SF1P30408 202 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 HSPA1LP34931 641 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 MRPL12P52815 198 aaKnown RBP13.17□□□□□ -0.3
PTCD2-211ENST00000536805 SLC12A3P55017 1021 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 CLUL1Q15846 466 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 ERMARDQ5T6L9 678 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 NRAPQ86VF7 1730 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 ATP8B4Q8TF62 1192 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 CCT6BQ92526 530 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 XPO6Q96QU8 1125 aaKnown RBP13.17□□□□□ -0.3
PTCD2-211ENST00000536805 SETDB2Q96T68 719 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 DHX36Q9H2U1 1008 aaKnown RBP13.17□□□□□ -0.3
PTCD2-211ENST00000536805 MTMR4Q9NYA4 1195 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 SPATA31A1Q5TZJ5 1347 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 POTEB3A0JP26 581 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 POTECB2RU33 542 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 PDXKO00764 312 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 KRT18P05783 430 aaKnown RBP13.17□□□□□ -0.3
PTCD2-211ENST00000536805 PTENP60484 403 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 UBE2SQ16763 222 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 KNOP1Q1ED39 458 aaKnown RBP13.17□□□□□ -0.3
PTCD2-211ENST00000536805 BMT2Q1RMZ1 405 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 POTEBQ6S5H4 581 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 EPM2AIP1Q7L775 607 aaPredicted RBP13.17□□□□□ -0.3
PTCD2-211ENST00000536805 DAAM2Q86T65 1068 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 CHMP6Q96FZ7 201 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 NAP1L3Q99457 506 aaPredicted RBP13.17□□□□□ -0.3
PTCD2-211ENST00000536805 FMO2Q99518 471 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 GLT8D2Q9H1C3 349 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 KCNMB3Q9NPA1 279 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 SIX2Q9NPC8 291 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 NARFQ9UHQ1 456 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 AMFRQ9UKV5 643 aa13.17□□□□□ -0.3
PTCD2-211ENST00000536805 ATF5Q9Y2D1 282 aaPredicted RBP13.17□□□□□ -0.3
PTCD2-211ENST00000536805 IGKV6D-41A0A0C4DH26 115 aa13.16□□□□□ -0.3
PTCD2-211ENST00000536805 NPHP3-ACAD11A0A0J9YXS1 232 aa13.16□□□□□ -0.3
PTCD2-211ENST00000536805 FAM187AA6NFU0 413 aa13.16□□□□□ -0.3
PTCD2-211ENST00000536805 DDX3XO00571 662 aaKnown RBP eCLIP13.16□□□□□ -0.3
PTCD2-211ENST00000536805 GSTA1P08263 222 aa13.16□□□□□ -0.3
PTCD2-211ENST00000536805 SLC8A1P32418 973 aa13.16□□□□□ -0.3
PTCD2-211ENST00000536805 ZNF543Q08ER8 600 aa13.16□□□□□ -0.3
PTCD2-211ENST00000536805 SPRED3Q2MJR0 410 aa13.16□□□□□ -0.3
PTCD2-211ENST00000536805 NBPF9Q3BBW0 867 aa13.16□□□□□ -0.3
PTCD2-211ENST00000536805 ARSHQ5FYA8 562 aa13.16□□□□□ -0.3
PTCD2-211ENST00000536805 CPLX4Q7Z7G2 160 aa13.16□□□□□ -0.3
PTCD2-211ENST00000536805 HVCN1Q96D96 273 aa13.16□□□□□ -0.3
PTCD2-211ENST00000536805 FAM163AQ96GL9 167 aaPredicted RBP13.16□□□□□ -0.3
PTCD2-211ENST00000536805 MBOAT7Q96N66 472 aa13.16□□□□□ -0.3
PTCD2-211ENST00000536805 JMJD4Q9H9V9 463 aa13.16□□□□□ -0.3
PTCD2-211ENST00000536805 HAUS2Q9NVX0 235 aa13.16□□□□□ -0.3
PTCD2-211ENST00000536805 DONSONQ9NYP3 566 aa13.16□□□□□ -0.3
PTCD2-211ENST00000536805 GOLGA6L10A0A0M3HER8 536 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 DCDC2CA8MYV0 355 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 TMEM253P0C7T8 217 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 ELF1P32519 619 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 NF2P35240 595 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 RHBDL3P58872 404 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 MOXD1Q6UVY6 613 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 TPTE2Q6XPS3 522 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 CROCCP2Q86T23 111 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 SLF2Q8IX21 1173 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 SLFN12Q8IYM2 578 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 CCDC197Q8NCU1 140 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 RFFLQ8WZ73 363 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 PGM2Q96G03 612 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 TYW1Q9NV66 732 aaKnown RBP13.15□□□□□ -0.3
PTCD2-211ENST00000536805 ANKIB1Q9P2G1 1089 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 GAKO14976 1311 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 CYP3A7-CYP3A51PA0A087WV96 503 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 F8W031 263 aaPredicted RBP13.15□□□□□ -0.3
PTCD2-211ENST00000536805 DDX3YO15523 660 aaKnown RBP13.15□□□□□ -0.3
PTCD2-211ENST00000536805 ASAP2O43150 1006 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 MGRN1O60291 552 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 PPP1R11O60927 126 aaPredicted RBP13.15□□□□□ -0.3
PTCD2-211ENST00000536805 LMNB1P20700 586 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 CYP3A7P24462 503 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 RPL13P26373 211 aaKnown RBP13.15□□□□□ -0.3
PTCD2-211ENST00000536805 CACNB1Q02641 598 aaPredicted RBP13.15□□□□□ -0.3
PTCD2-211ENST00000536805 DHX34Q14147 1143 aaKnown RBP13.15□□□□□ -0.3
PTCD2-211ENST00000536805 ITIH4Q14624 930 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 DUPD1Q68J44 220 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 FMNL3Q8IVF7 1028 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 ADGRF4Q8IZF3 695 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 SLC30A5Q8TAD4 765 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 CELF4Q9BZC1 486 aaKnown RBP13.15□□□□□ -0.3
PTCD2-211ENST00000536805 CARD9Q9H257 536 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 DPH5Q9H2P9 285 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 ZDHHC18Q9NUE0 388 aa13.15□□□□□ -0.3
PTCD2-211ENST00000536805 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms