RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 PKN1Q16512 942 aa22.34■■□□□ 1.17
TNFRSF1B-204ENST00000536782 KIAA0319LQ8IZA0 1049 aa22.34■■□□□ 1.17
TNFRSF1B-204ENST00000536782 P2RX5Q93086 422 aa22.34■■□□□ 1.17
TNFRSF1B-204ENST00000536782 UIMC1Q96RL1 719 aa22.34■■□□□ 1.17
TNFRSF1B-204ENST00000536782 TMX1Q9H3N1 280 aa22.34■■□□□ 1.17
TNFRSF1B-204ENST00000536782 ALG13Q9NP73 1137 aaKnown RBP22.34■■□□□ 1.17
TNFRSF1B-204ENST00000536782 LRFN2Q9ULH4 789 aa22.34■■□□□ 1.17
TNFRSF1B-204ENST00000536782 GINS2Q9Y248 185 aa22.34■■□□□ 1.17
TNFRSF1B-204ENST00000536782 GPR37L1O60883 481 aa22.33■■□□□ 1.17
TNFRSF1B-204ENST00000536782 MMP1P03956 469 aa22.33■■□□□ 1.17
TNFRSF1B-204ENST00000536782 AKAP17AQ02040 695 aaKnown RBP22.33■■□□□ 1.17
TNFRSF1B-204ENST00000536782 TMEM266Q2M3C6 531 aa22.33■■□□□ 1.17
TNFRSF1B-204ENST00000536782 NAALADL2Q58DX5 795 aa22.33■■□□□ 1.17
TNFRSF1B-204ENST00000536782 ZNF746Q6NUN9 644 aaPredicted RBP22.33■■□□□ 1.17
TNFRSF1B-204ENST00000536782 CKAP2LQ8IYA6 745 aa22.33■■□□□ 1.17
TNFRSF1B-204ENST00000536782 FBXL16Q8N461 479 aa22.33■■□□□ 1.17
TNFRSF1B-204ENST00000536782 TCEAL9Q9UHQ7 104 aa22.33■■□□□ 1.17
TNFRSF1B-204ENST00000536782 PLAGL2Q9UPG8 496 aa22.33■■□□□ 1.17
TNFRSF1B-204ENST00000536782 PIEZO1Q92508 2521 aa22.33■■□□□ 1.17
TNFRSF1B-204ENST00000536782 NID2Q14112 1375 aa22.33■■□□□ 1.17
TNFRSF1B-204ENST00000536782 WDR81Q562E7 1941 aa22.32■■□□□ 1.16
TNFRSF1B-204ENST00000536782 ADAMTS3O15072 1205 aa22.32■■□□□ 1.16
TNFRSF1B-204ENST00000536782 RPS6KA5O75582 802 aa22.32■■□□□ 1.16
TNFRSF1B-204ENST00000536782 ATP4AP20648 1035 aa22.32■■□□□ 1.16
TNFRSF1B-204ENST00000536782 RPS6KB1P23443 525 aa22.32■■□□□ 1.16
TNFRSF1B-204ENST00000536782 HYAL1Q12794 435 aa22.32■■□□□ 1.16
TNFRSF1B-204ENST00000536782 PAN2Q504Q3 1202 aaKnown RBP22.32■■□□□ 1.16
TNFRSF1B-204ENST00000536782 ODR4Q5SWX8 454 aa22.32■■□□□ 1.16
TNFRSF1B-204ENST00000536782 SMAP1Q8IYB5 467 aaPredicted RBP22.32■■□□□ 1.16
TNFRSF1B-204ENST00000536782 BBXQ8WY36 941 aaPredicted RBP22.32■■□□□ 1.16
TNFRSF1B-204ENST00000536782 PHKBQ93100 1093 aa22.32■■□□□ 1.16
TNFRSF1B-204ENST00000536782 ERVK-5Q9HDB9 667 aa22.32■■□□□ 1.16
TNFRSF1B-204ENST00000536782 MAFBQ9Y5Q3 323 aaPredicted RBP22.32■■□□□ 1.16
TNFRSF1B-204ENST00000536782 FAM86C2PA6NEL3 165 aa22.31■■□□□ 1.16
TNFRSF1B-204ENST00000536782 ZBTB42B2RXF5 422 aa22.31■■□□□ 1.16
TNFRSF1B-204ENST00000536782 CSPG5O95196 566 aa22.31■■□□□ 1.16
TNFRSF1B-204ENST00000536782 PSAPP07602 524 aa22.31■■□□□ 1.16
TNFRSF1B-204ENST00000536782 PSMA5P28066 241 aa22.31■■□□□ 1.16
TNFRSF1B-204ENST00000536782 LTBRP36941 435 aa22.31■■□□□ 1.16
TNFRSF1B-204ENST00000536782 SARSP49591 514 aaKnown RBP22.31■■□□□ 1.16
TNFRSF1B-204ENST00000536782 CTC1Q2NKJ3 1217 aa22.31■■□□□ 1.16
TNFRSF1B-204ENST00000536782 PRR16Q569H4 304 aa22.31■■□□□ 1.16
TNFRSF1B-204ENST00000536782 CCDC148Q8NFR7 591 aa22.31■■□□□ 1.16
TNFRSF1B-204ENST00000536782 BICD2Q8TD16 824 aa22.31■■□□□ 1.16
TNFRSF1B-204ENST00000536782 AGXT2Q9BYV1 514 aa22.31■■□□□ 1.16
TNFRSF1B-204ENST00000536782 CDHR5Q9HBB8 845 aa22.31■■□□□ 1.16
TNFRSF1B-204ENST00000536782 RNF216Q9NWF9 866 aaPredicted RBP22.31■■□□□ 1.16
TNFRSF1B-204ENST00000536782 PRKAG3Q9UGI9 489 aa22.31■■□□□ 1.16
TNFRSF1B-204ENST00000536782 NOC2LQ9Y3T9 749 aaKnown RBP22.31■■□□□ 1.16
TNFRSF1B-204ENST00000536782 PCDHB7Q9Y5E2 793 aa22.31■■□□□ 1.16
TNFRSF1B-204ENST00000536782 PCDHA10Q9Y5I2 948 aa22.31■■□□□ 1.16
TNFRSF1B-204ENST00000536782 GPR182O15218 404 aa22.3■■□□□ 1.16
TNFRSF1B-204ENST00000536782 ITGB1P05556 798 aa22.3■■□□□ 1.16
TNFRSF1B-204ENST00000536782 IBSPP21815 317 aaPredicted RBP22.3■■□□□ 1.16
TNFRSF1B-204ENST00000536782 CIITAP33076 1130 aa22.3■■□□□ 1.16
TNFRSF1B-204ENST00000536782 CAMK1Q14012 370 aa22.3■■□□□ 1.16
TNFRSF1B-204ENST00000536782 TMEM40Q8WWA1 233 aa22.3■■□□□ 1.16
TNFRSF1B-204ENST00000536782 PPP2R3CQ969Q6 453 aa22.3■■□□□ 1.16
TNFRSF1B-204ENST00000536782 RNF26Q9BY78 433 aaPredicted RBP22.3■■□□□ 1.16
TNFRSF1B-204ENST00000536782 IGFLR1Q9H665 355 aa22.3■■□□□ 1.16
TNFRSF1B-204ENST00000536782 C1orf112Q9NSG2 853 aa22.3■■□□□ 1.16
TNFRSF1B-204ENST00000536782 ST3GAL5Q9UNP4 418 aa22.3■■□□□ 1.16
TNFRSF1B-204ENST00000536782 HCN4Q9Y3Q4 1203 aa22.3■■□□□ 1.16
TNFRSF1B-204ENST00000536782 DENND3A2RUS2 1198 aa22.29■■□□□ 1.16
TNFRSF1B-204ENST00000536782 MGEA5O60502 916 aa22.29■■□□□ 1.16
TNFRSF1B-204ENST00000536782 C22orf31O95567 290 aa22.29■■□□□ 1.16
TNFRSF1B-204ENST00000536782 GATMP50440 423 aa22.29■■□□□ 1.16
TNFRSF1B-204ENST00000536782 NTRK3Q16288 839 aa22.29■■□□□ 1.16
TNFRSF1B-204ENST00000536782 TRMT1LQ7Z2T5 733 aaKnown RBP22.29■■□□□ 1.16
TNFRSF1B-204ENST00000536782 METTL13Q8N6R0 699 aa22.29■■□□□ 1.16
TNFRSF1B-204ENST00000536782 KLHL23Q8NBE8 558 aa22.29■■□□□ 1.16
TNFRSF1B-204ENST00000536782 SPPL3Q8TCT6 385 aa22.29■■□□□ 1.16
TNFRSF1B-204ENST00000536782 RASGRP4Q8TDF6 673 aa22.29■■□□□ 1.16
TNFRSF1B-204ENST00000536782 FAM122AQ96E09 287 aa22.29■■□□□ 1.16
TNFRSF1B-204ENST00000536782 ADAM2Q99965 735 aa22.29■■□□□ 1.16
TNFRSF1B-204ENST00000536782 SLC26A6Q9BXS9 759 aa22.29■■□□□ 1.16
TNFRSF1B-204ENST00000536782 RGS18Q9NS28 235 aa22.29■■□□□ 1.16
TNFRSF1B-204ENST00000536782 CEP131Q9UPN4 1083 aa22.29■■□□□ 1.16
TNFRSF1B-204ENST00000536782 SAMM50Q9Y512 469 aa22.29■■□□□ 1.16
TNFRSF1B-204ENST00000536782 MYH9P35579 1960 aaKnown RBP22.29■■□□□ 1.16
TNFRSF1B-204ENST00000536782 PPFIA3O75145 1194 aa22.28■■□□□ 1.16
TNFRSF1B-204ENST00000536782 REC8O95072 547 aa22.28■■□□□ 1.16
TNFRSF1B-204ENST00000536782 ALADP13716 330 aa22.28■■□□□ 1.16
TNFRSF1B-204ENST00000536782 IFNAR1P17181 557 aa22.28■■□□□ 1.16
TNFRSF1B-204ENST00000536782 CRYBB1P53674 252 aaPredicted RBP22.28■■□□□ 1.16
TNFRSF1B-204ENST00000536782 DLX2Q07687 328 aaPredicted RBP22.28■■□□□ 1.16
TNFRSF1B-204ENST00000536782 KIZQ2M2Z5 673 aa22.28■■□□□ 1.16
TNFRSF1B-204ENST00000536782 SLC24A5Q71RS6 500 aa22.28■■□□□ 1.16
TNFRSF1B-204ENST00000536782 PPP1R16BQ96T49 567 aa22.28■■□□□ 1.16
TNFRSF1B-204ENST00000536782 GABBR1Q9UBS5 961 aa22.28■■□□□ 1.16
TNFRSF1B-204ENST00000536782 ZNF318Q5VUA4 2279 aa22.28■■□□□ 1.16
TNFRSF1B-204ENST00000536782 FNDC1Q4ZHG4 1894 aaPredicted RBP22.28■■□□□ 1.16
TNFRSF1B-204ENST00000536782 PLXNA4Q9HCM2 1894 aa22.28■■□□□ 1.16
TNFRSF1B-204ENST00000536782 WDFY4Q6ZS81 3184 aa22.27■■□□□ 1.16
TNFRSF1B-204ENST00000536782 DNAJB1P25685 340 aa22.27■■□□□ 1.16
TNFRSF1B-204ENST00000536782 GTF2F1P35269 517 aaKnown RBP eCLIP22.27■■□□□ 1.167e-7■■■■■ 41.3
TNFRSF1B-204ENST00000536782 ZP2Q05996 745 aa22.27■■□□□ 1.16
TNFRSF1B-204ENST00000536782 CLUL1Q15846 466 aa22.27■■□□□ 1.16
TNFRSF1B-204ENST00000536782 ADHFE1Q8IWW8 467 aa22.27■■□□□ 1.16
TNFRSF1B-204ENST00000536782 FAM167AQ96KS9 214 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms