RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 SPTBN5Q9NRC6 3674 aaKnown RBP20.17■□□□□ 0.82
TNFRSF1A-209ENST00000536717 ZNF862O60290 1169 aa20.16■□□□□ 0.82
TNFRSF1A-209ENST00000536717 AMHP03971 560 aa20.16■□□□□ 0.82
TNFRSF1A-209ENST00000536717 NR5A1Q13285 461 aa20.16■□□□□ 0.82
TNFRSF1A-209ENST00000536717 IER5Q5VY09 327 aa20.16■□□□□ 0.82
TNFRSF1A-209ENST00000536717 NEK8Q86SG6 692 aa20.16■□□□□ 0.82
TNFRSF1A-209ENST00000536717 CKAP2LQ8IYA6 745 aa20.16■□□□□ 0.82
TNFRSF1A-209ENST00000536717 TNFRSF25Q93038 417 aa20.16■□□□□ 0.82
TNFRSF1A-209ENST00000536717 AGO3Q9H9G7 860 aaKnown RBP20.16■□□□□ 0.82
TNFRSF1A-209ENST00000536717 DDX25Q9UHL0 483 aaKnown RBP20.16■□□□□ 0.82
TNFRSF1A-209ENST00000536717 TRPV2Q9Y5S1 764 aa20.16■□□□□ 0.82
TNFRSF1A-209ENST00000536717 FAM205CA6NFA0 338 aa20.15■□□□□ 0.82
TNFRSF1A-209ENST00000536717 EPOPA6NHQ4 379 aa20.15■□□□□ 0.82
TNFRSF1A-209ENST00000536717 K7ELQ4 463 aaPredicted RBP20.15■□□□□ 0.82
TNFRSF1A-209ENST00000536717 SFNP31947 248 aa20.15■□□□□ 0.82
TNFRSF1A-209ENST00000536717 UGCGQ16739 394 aa20.15■□□□□ 0.82
TNFRSF1A-209ENST00000536717 USP38Q8NB14 1042 aa20.15■□□□□ 0.82
TNFRSF1A-209ENST00000536717 TOP1MTQ969P6 601 aa20.15■□□□□ 0.82
TNFRSF1A-209ENST00000536717 LLPHQ9BRT6 129 aaKnown RBP20.15■□□□□ 0.82
TNFRSF1A-209ENST00000536717 C22orf31O95567 290 aa20.14■□□□□ 0.81
TNFRSF1A-209ENST00000536717 KRT2P35908 639 aa20.14■□□□□ 0.81
TNFRSF1A-209ENST00000536717 JAK3P52333 1124 aa20.14■□□□□ 0.81
TNFRSF1A-209ENST00000536717 HTRA4P83105 476 aaPredicted RBP20.14■□□□□ 0.81
TNFRSF1A-209ENST00000536717 PPP4R3AQ6IN85 833 aa20.14■□□□□ 0.81
TNFRSF1A-209ENST00000536717 TSHZ1Q6ZSZ6 1077 aa20.14■□□□□ 0.81
TNFRSF1A-209ENST00000536717 KIAA0319LQ8IZA0 1049 aa20.14■□□□□ 0.81
TNFRSF1A-209ENST00000536717 NME8Q8N427 588 aa20.14■□□□□ 0.81
TNFRSF1A-209ENST00000536717 CELF4Q9BZC1 486 aaKnown RBP20.14■□□□□ 0.81
TNFRSF1A-209ENST00000536717 KCNMB3Q9NPA1 279 aa20.14■□□□□ 0.81
TNFRSF1A-209ENST00000536717 SQORQ9Y6N5 450 aa20.14■□□□□ 0.81
TNFRSF1A-209ENST00000536717 KDM3AQ9Y4C1 1321 aa20.14■□□□□ 0.81
TNFRSF1A-209ENST00000536717 RFXAPO00287 272 aa20.13■□□□□ 0.81
TNFRSF1A-209ENST00000536717 PRKCEQ02156 737 aa20.13■□□□□ 0.81
TNFRSF1A-209ENST00000536717 MIER3Q7Z3K6 550 aa20.13■□□□□ 0.81
TNFRSF1A-209ENST00000536717 RDM1Q8NG50 284 aa20.13■□□□□ 0.81
TNFRSF1A-209ENST00000536717 FAM167AQ96KS9 214 aa20.13■□□□□ 0.81
TNFRSF1A-209ENST00000536717 CEP131Q9UPN4 1083 aa20.13■□□□□ 0.81
TNFRSF1A-209ENST00000536717 RALGAPA2Q2PPJ7 1873 aa20.13■□□□□ 0.81
TNFRSF1A-209ENST00000536717 M0QZ92 97 aa20.12■□□□□ 0.81
TNFRSF1A-209ENST00000536717 CCNT1O60563 726 aaKnown RBP20.12■□□□□ 0.81
TNFRSF1A-209ENST00000536717 MMP1P03956 469 aa20.12■□□□□ 0.81
TNFRSF1A-209ENST00000536717 OATP04181 439 aa20.12■□□□□ 0.81
TNFRSF1A-209ENST00000536717 GCFC2P16383 781 aaKnown RBP20.12■□□□□ 0.81
TNFRSF1A-209ENST00000536717 IGFBP4P22692 258 aa20.12■□□□□ 0.81
TNFRSF1A-209ENST00000536717 CD52P31358 61 aa20.12■□□□□ 0.81
TNFRSF1A-209ENST00000536717 FOSBP53539 338 aa20.12■□□□□ 0.81
TNFRSF1A-209ENST00000536717 ARNTL2Q8WYA1 636 aa20.12■□□□□ 0.81
TNFRSF1A-209ENST00000536717 INSL6Q9Y581 213 aa20.12■□□□□ 0.81
TNFRSF1A-209ENST00000536717 COL4A6Q14031 1691 aa20.12■□□□□ 0.81
TNFRSF1A-209ENST00000536717 LINC01553A4QN01 128 aa20.12■□□□□ 0.81
TNFRSF1A-209ENST00000536717 UPP2O95045 317 aa20.12■□□□□ 0.81
TNFRSF1A-209ENST00000536717 KRT40Q6A162 431 aa20.12■□□□□ 0.81
TNFRSF1A-209ENST00000536717 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.12■□□□□ 0.81
TNFRSF1A-209ENST00000536717 LINC01599Q8WXQ3 324 aa20.12■□□□□ 0.81
TNFRSF1A-209ENST00000536717 BRMS1Q9HCU9 246 aa20.12■□□□□ 0.81
TNFRSF1A-209ENST00000536717 VAV3Q9UKW4 847 aa20.12■□□□□ 0.81
TNFRSF1A-209ENST00000536717 BRWD1Q9NSI6 2320 aa20.11■□□□□ 0.81
TNFRSF1A-209ENST00000536717 BTBD18B2RXH4 712 aa20.11■□□□□ 0.81
TNFRSF1A-209ENST00000536717 HMGN5P82970 282 aaKnown RBP20.11■□□□□ 0.81
TNFRSF1A-209ENST00000536717 POTEDQ86YR6 584 aa20.11■□□□□ 0.81
TNFRSF1A-209ENST00000536717 DIS3L2Q8IYB7 885 aaKnown RBP20.11■□□□□ 0.81
TNFRSF1A-209ENST00000536717 LINC01465Q8N7H1 131 aa20.11■□□□□ 0.81
TNFRSF1A-209ENST00000536717 SP7Q8TDD2 431 aaPredicted RBP20.11■□□□□ 0.81
TNFRSF1A-209ENST00000536717 HAS1Q92839 578 aa20.11■□□□□ 0.81
TNFRSF1A-209ENST00000536717 FAM20AQ96MK3 541 aa20.11■□□□□ 0.81
TNFRSF1A-209ENST00000536717 CDHR5Q9HBB8 845 aa20.11■□□□□ 0.81
TNFRSF1A-209ENST00000536717 PADI3Q9ULW8 664 aa20.11■□□□□ 0.81
TNFRSF1A-209ENST00000536717 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.11■□□□□ 0.81
TNFRSF1A-209ENST00000536717 CUL9Q8IWT3 2517 aa20.1■□□□□ 0.81
TNFRSF1A-209ENST00000536717 MYO7AQ13402 2215 aa20.1■□□□□ 0.81
TNFRSF1A-209ENST00000536717 EML1O00423 815 aa20.1■□□□□ 0.81
TNFRSF1A-209ENST00000536717 ENPP3O14638 875 aa20.1■□□□□ 0.81
TNFRSF1A-209ENST00000536717 STBD1O95210 358 aa20.1■□□□□ 0.81
TNFRSF1A-209ENST00000536717 PPP2R5CQ13362 524 aa20.1■□□□□ 0.81
TNFRSF1A-209ENST00000536717 METTL13Q8N6R0 699 aa20.1■□□□□ 0.81
TNFRSF1A-209ENST00000536717 TMEM40Q8WWA1 233 aa20.1■□□□□ 0.81
TNFRSF1A-209ENST00000536717 NAP1L4Q99733 375 aaKnown RBP20.1■□□□□ 0.81
TNFRSF1A-209ENST00000536717 NRBP2Q9NSY0 501 aa20.1■□□□□ 0.81
TNFRSF1A-209ENST00000536717 GINS2Q9Y248 185 aa20.1■□□□□ 0.81
TNFRSF1A-209ENST00000536717 ARID2Q68CP9 1835 aa20.1■□□□□ 0.81
TNFRSF1A-209ENST00000536717 KIAA1671Q9BY89 1806 aa20.09■□□□□ 0.81
TNFRSF1A-209ENST00000536717 XIRP2A4UGR9 3374 aa20.09■□□□□ 0.81
TNFRSF1A-209ENST00000536717 TBX3O15119 743 aa20.09■□□□□ 0.81
TNFRSF1A-209ENST00000536717 MAGEB2O15479 319 aa20.09■□□□□ 0.81
TNFRSF1A-209ENST00000536717 LPXNO60711 386 aa20.09■□□□□ 0.81
TNFRSF1A-209ENST00000536717 VTNP04004 478 aa20.09■□□□□ 0.81
TNFRSF1A-209ENST00000536717 POU3F3P20264 500 aaPredicted RBP20.09■□□□□ 0.81
TNFRSF1A-209ENST00000536717 CLCN3P51790 818 aa20.09■□□□□ 0.81
TNFRSF1A-209ENST00000536717 ERVK-21P61565 698 aa20.09■□□□□ 0.81
TNFRSF1A-209ENST00000536717 CUL4AQ13619 759 aa20.09■□□□□ 0.81
TNFRSF1A-209ENST00000536717 TARBP2Q15633 366 aaKnown RBP20.09■□□□□ 0.81
TNFRSF1A-209ENST00000536717 RTN4RL1Q86UN2 441 aaPredicted RBP20.09■□□□□ 0.81
TNFRSF1A-209ENST00000536717 PPM1EQ8WY54 764 aa20.09■□□□□ 0.81
TNFRSF1A-209ENST00000536717 TGS1Q96RS0 853 aaKnown RBP20.09■□□□□ 0.81
TNFRSF1A-209ENST00000536717 FNDC1Q4ZHG4 1894 aaPredicted RBP20.09■□□□□ 0.81
TNFRSF1A-209ENST00000536717 WNT7AO00755 349 aa20.08■□□□□ 0.81
TNFRSF1A-209ENST00000536717 PAK2Q13177 524 aa20.08■□□□□ 0.81
TNFRSF1A-209ENST00000536717 TRIM29Q14134 588 aa20.08■□□□□ 0.81
TNFRSF1A-209ENST00000536717 BECN1Q14457 450 aa20.08■□□□□ 0.81
TNFRSF1A-209ENST00000536717 TMEM266Q2M3C6 531 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms