RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 TUFT1Q9NNX1 390 aa17.53■□□□□ 0.4
CHMP1A-202ENST00000535997 RGL1Q9NZL6 768 aa17.53■□□□□ 0.4
CHMP1A-202ENST00000535997 NFU1Q9UMS0 254 aa17.53■□□□□ 0.4
CHMP1A-202ENST00000535997 PACSIN2Q9UNF0 486 aaPredicted RBP17.53■□□□□ 0.4
CHMP1A-202ENST00000535997 ATRNL1Q5VV63 1379 aa17.53■□□□□ 0.4
CHMP1A-202ENST00000535997 NRXN2Q9P2S2 1712 aa17.53■□□□□ 0.4
CHMP1A-202ENST00000535997 IGLV3-22A0A075B6J6 115 aa17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 EML1O00423 815 aa17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 GH2P01242 217 aa17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 CASP4P49662 377 aa17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 DNA2P51530 1060 aa17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 IRAK1P51617 712 aa17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 NFIL3Q16649 462 aa17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 LRRC57Q8N9N7 239 aa17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 ACTRT1Q8TDG2 376 aa17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 BORCS6Q96GS4 357 aa17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 SIX2Q9NPC8 291 aa17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 FEZ2Q9UHY8 353 aaPredicted RBP17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 LCMT1Q9UIC8 334 aa17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 INTUQ9ULD6 942 aa17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 PRR12Q9ULL5 1215 aa17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 SLITRK3O94933 977 aa17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 KIF4AO95239 1232 aa17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 NOP2P46087 812 aaKnown RBP17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 COL23A1Q86Y22 540 aaPredicted RBP17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 WHAMMQ8TF30 809 aa17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 IFT81Q8WYA0 676 aa17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 ZNF622Q969S3 477 aaKnown RBP eCLIP17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 RSPH14Q9UHP6 348 aa17.52■□□□□ 0.4
CHMP1A-202ENST00000535997 KCNK3O14649 394 aa17.51■□□□□ 0.39
CHMP1A-202ENST00000535997 TGFB1I1O43294 461 aa17.51■□□□□ 0.39
CHMP1A-202ENST00000535997 PPP1R12BO60237 982 aaPredicted RBP17.51■□□□□ 0.39
CHMP1A-202ENST00000535997 ECE2O60344 883 aa17.51■□□□□ 0.39
CHMP1A-202ENST00000535997 PSMC2P35998 433 aaKnown RBP17.51■□□□□ 0.39
CHMP1A-202ENST00000535997 C1orf186Q6ZWK4 172 aa17.51■□□□□ 0.39
CHMP1A-202ENST00000535997 CAPS2Q9BXY5 557 aa17.51■□□□□ 0.39
CHMP1A-202ENST00000535997 GCNT4Q9P109 453 aa17.51■□□□□ 0.39
CHMP1A-202ENST00000535997 NENFQ9UMX5 172 aa17.51■□□□□ 0.39
CHMP1A-202ENST00000535997 PCDHB13Q9Y5F0 798 aa17.51■□□□□ 0.39
CHMP1A-202ENST00000535997 KIF13BQ9NQT8 1826 aa17.51■□□□□ 0.39
CHMP1A-202ENST00000535997 A0A0A6YYK5 440 aaPredicted RBP17.51■□□□□ 0.39
CHMP1A-202ENST00000535997 CLIC2O15247 247 aa17.51■□□□□ 0.39
CHMP1A-202ENST00000535997 GFPT2O94808 682 aa17.51■□□□□ 0.39
CHMP1A-202ENST00000535997 FERP16591 822 aa17.51■□□□□ 0.39
CHMP1A-202ENST00000535997 SLC20A2Q08357 652 aa17.51■□□□□ 0.39
CHMP1A-202ENST00000535997 KCNA1Q09470 495 aa17.51■□□□□ 0.39
CHMP1A-202ENST00000535997 SCFD2Q8WU76 684 aa17.51■□□□□ 0.39
CHMP1A-202ENST00000535997 ZIM3Q96PE6 472 aa17.51■□□□□ 0.39
CHMP1A-202ENST00000535997 MKNK1Q9BUB5 465 aa17.51■□□□□ 0.39
CHMP1A-202ENST00000535997 A0A1W2PRG0 241 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 FAM13AO94988 1023 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 H2AFZP0C0S5 128 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 MUTP22033 750 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 NPEPPSP55786 919 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 RNASE9P60153 205 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 JAG1P78504 1218 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 PPP2R5CQ13362 524 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 CFAP58Q5T655 872 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 H2AFVQ71UI9 128 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 KRT27Q7Z3Y8 459 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 SLFN11Q7Z7L1 901 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 MYCT1Q8N699 235 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 TPCN2Q8NHX9 752 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 CALR3Q96L12 384 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 ESYT3A0FGR9 886 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 SFI1A8K8P3 1242 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 PSMD10O75832 226 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 MMP10P09238 476 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 FAM153BP0C7A2 387 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 STAT2P52630 851 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 FAM153CQ494X1 144 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 DNAJC21Q5F1R6 531 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 TPH2Q8IWU9 490 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 PIGOQ8TEQ8 1089 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 TDRD3Q9H7E2 651 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 QTRT2Q9H974 415 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 PARVGQ9HBI0 331 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 SEL1LQ9UBV2 794 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 FAM153AQ9UHL3 310 aa17.5■□□□□ 0.39
CHMP1A-202ENST00000535997 SHTN1A0MZ66 631 aa17.49■□□□□ 0.39
CHMP1A-202ENST00000535997 ZSCAN5CA6NGD5 496 aaPredicted RBP17.49■□□□□ 0.39
CHMP1A-202ENST00000535997 STAT1P42224 750 aa17.49■□□□□ 0.39
CHMP1A-202ENST00000535997 SKOR1P84550 965 aa17.49■□□□□ 0.39
CHMP1A-202ENST00000535997 CTTNQ14247 550 aaKnown RBP17.49■□□□□ 0.39
CHMP1A-202ENST00000535997 LRCH2Q5VUJ6 765 aa17.49■□□□□ 0.39
CHMP1A-202ENST00000535997 CD302Q8IX05 232 aa17.49■□□□□ 0.39
CHMP1A-202ENST00000535997 FAM186BQ8IYM0 893 aa17.49■□□□□ 0.39
CHMP1A-202ENST00000535997 SYCE1Q8N0S2 351 aa17.49■□□□□ 0.39
CHMP1A-202ENST00000535997 CASKIN2Q8WXE0 1202 aa17.49■□□□□ 0.39
CHMP1A-202ENST00000535997 ARL8AQ96BM9 186 aa17.49■□□□□ 0.39
CHMP1A-202ENST00000535997 RASSF4Q9H2L5 321 aa17.49■□□□□ 0.39
CHMP1A-202ENST00000535997 BCAS3Q9H6U6 928 aa17.49■□□□□ 0.39
CHMP1A-202ENST00000535997 POLD4Q9HCU8 107 aa17.49■□□□□ 0.39
CHMP1A-202ENST00000535997 KCND2Q9NZV8 630 aa17.49■□□□□ 0.39
CHMP1A-202ENST00000535997 RAD51CO43502 376 aa17.49■□□□□ 0.39
CHMP1A-202ENST00000535997 TTMPQ5BVD1 217 aa17.49■□□□□ 0.39
CHMP1A-202ENST00000535997 C1orf131Q8NDD1 294 aaKnown RBP17.49■□□□□ 0.39
CHMP1A-202ENST00000535997 FLAD1Q8NFF5 587 aa17.49■□□□□ 0.39
CHMP1A-202ENST00000535997 SLC5A5Q92911 643 aa17.49■□□□□ 0.39
CHMP1A-202ENST00000535997 ISCUQ9H1K1 167 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms