RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 CRYBB1P53674 252 aaPredicted RBP13.39□□□□□ -0.27
KNTC1-208ENST00000535410 GRB10Q13322 594 aa13.39□□□□□ -0.27
KNTC1-208ENST00000535410 PPP4R3AQ6IN85 833 aa13.39□□□□□ -0.27
KNTC1-208ENST00000535410 MIER3Q7Z3K6 550 aa13.39□□□□□ -0.27
KNTC1-208ENST00000535410 NEK8Q86SG6 692 aa13.39□□□□□ -0.27
KNTC1-208ENST00000535410 KIAA0319LQ8IZA0 1049 aa13.39□□□□□ -0.27
KNTC1-208ENST00000535410 FIBCD1Q8N539 461 aa13.39□□□□□ -0.27
KNTC1-208ENST00000535410 METTL13Q8N6R0 699 aa13.39□□□□□ -0.27
KNTC1-208ENST00000535410 TRAPPC12Q8WVT3 735 aa13.39□□□□□ -0.27
KNTC1-208ENST00000535410 UIMC1Q96RL1 719 aa13.39□□□□□ -0.27
KNTC1-208ENST00000535410 MAP7D2Q96T17 732 aa13.39□□□□□ -0.27
KNTC1-208ENST00000535410 CHD9Q3L8U1 2897 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 RFXAPO00287 272 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 ADAMTS3O15072 1205 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 TBX3O15119 743 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 CHMP2AO43633 222 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 RPS6KA5O75582 802 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 PSMD10O75832 226 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 OATP04181 439 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 RB1P06400 928 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 CD52P31358 61 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 DNM2P50570 870 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 INF2Q27J81 1249 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 LETM2Q2VYF4 491 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 TRMT1LQ7Z2T5 733 aaKnown RBP13.38□□□□□ -0.27
KNTC1-208ENST00000535410 EXOC8Q8IYI6 725 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 MBOAT7Q96N66 472 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 ASB2Q96Q27 587 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 JPH2Q9BR39 696 aaPredicted RBP13.38□□□□□ -0.27
KNTC1-208ENST00000535410 SUGCTQ9HAC7 445 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 C1orf112Q9NSG2 853 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 MTUS1Q9ULD2 1270 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 LRFN2Q9ULH4 789 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 PADI3Q9ULW8 664 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 KCNJ14Q9UNX9 436 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 GINS2Q9Y248 185 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 DOCK5Q9H7D0 1870 aa13.38□□□□□ -0.27
KNTC1-208ENST00000535410 C22orf31O95567 290 aa13.37□□□□□ -0.27
KNTC1-208ENST00000535410 ATP4AP20648 1035 aa13.37□□□□□ -0.27
KNTC1-208ENST00000535410 KRT2P35908 639 aa13.37□□□□□ -0.27
KNTC1-208ENST00000535410 TBC1D8BQ0IIM8 1120 aa13.37□□□□□ -0.27
KNTC1-208ENST00000535410 TMEM62Q0P6H9 643 aa13.37□□□□□ -0.27
KNTC1-208ENST00000535410 NFX1Q12986 1120 aaKnown RBP13.37□□□□□ -0.27
KNTC1-208ENST00000535410 ME3Q16798 604 aa13.37□□□□□ -0.27
KNTC1-208ENST00000535410 EPC2Q52LR7 807 aa13.37□□□□□ -0.27
KNTC1-208ENST00000535410 XKR3Q5GH77 459 aa13.37□□□□□ -0.27
KNTC1-208ENST00000535410 EFCAB12Q6NXP0 572 aa13.37□□□□□ -0.27
KNTC1-208ENST00000535410 NPAS4Q8IUM7 802 aa13.37□□□□□ -0.27
KNTC1-208ENST00000535410 SLFN12Q8IYM2 578 aa13.37□□□□□ -0.27
KNTC1-208ENST00000535410 GTF3C6Q969F1 213 aa13.37□□□□□ -0.27
KNTC1-208ENST00000535410 AIFM3Q96NN9 605 aa13.37□□□□□ -0.27
KNTC1-208ENST00000535410 COL25A1Q9BXS0 654 aaPredicted RBP13.37□□□□□ -0.27
KNTC1-208ENST00000535410 UNC45AQ9H3U1 944 aa13.37□□□□□ -0.27
KNTC1-208ENST00000535410 AGO3Q9H9G7 860 aaKnown RBP13.37□□□□□ -0.27
KNTC1-208ENST00000535410 LIMCH1Q9UPQ0 1083 aa13.37□□□□□ -0.27
KNTC1-208ENST00000535410 DENND3A2RUS2 1198 aa13.36□□□□□ -0.27
KNTC1-208ENST00000535410 EPOPA6NHQ4 379 aa13.36□□□□□ -0.27
KNTC1-208ENST00000535410 ZBTB42B2RXF5 422 aa13.36□□□□□ -0.27
KNTC1-208ENST00000535410 ARHGEF15O94989 841 aa13.36□□□□□ -0.27
KNTC1-208ENST00000535410 TDP2O95551 362 aa13.36□□□□□ -0.27
KNTC1-208ENST00000535410 PSMC5P62195 406 aa13.36□□□□□ -0.27
KNTC1-208ENST00000535410 PRKCEQ02156 737 aa13.36□□□□□ -0.27
KNTC1-208ENST00000535410 BTG3Q14201 252 aaPredicted RBP13.36□□□□□ -0.27
KNTC1-208ENST00000535410 SAFBQ15424 915 aaKnown RBP eCLIP13.36□□□□□ -0.27
KNTC1-208ENST00000535410 NPY5RQ15761 445 aa13.36□□□□□ -0.27
KNTC1-208ENST00000535410 PIK3AP1Q6ZUJ8 805 aa13.36□□□□□ -0.27
KNTC1-208ENST00000535410 TMEM192Q8IY95 271 aa13.36□□□□□ -0.27
KNTC1-208ENST00000535410 ETNPPLQ8TBG4 499 aa13.36□□□□□ -0.27
KNTC1-208ENST00000535410 HLA-CQ95604 372 aa13.36□□□□□ -0.27
KNTC1-208ENST00000535410 ZBTB10Q96DT7 871 aa13.36□□□□□ -0.27
KNTC1-208ENST00000535410 ZSCAN31Q96LW9 406 aaPredicted RBP13.36□□□□□ -0.27
KNTC1-208ENST00000535410 C11orf84Q9BUA3 381 aaPredicted RBP13.36□□□□□ -0.27
KNTC1-208ENST00000535410 NIFKQ9BYG3 293 aaKnown RBP13.36□□□□□ -0.27
KNTC1-208ENST00000535410 OSBPL7Q9BZF2 842 aa13.36□□□□□ -0.27
KNTC1-208ENST00000535410 AKT3Q9Y243 479 aa13.36□□□□□ -0.27
KNTC1-208ENST00000535410 PPME1Q9Y570 386 aa13.36□□□□□ -0.27
KNTC1-208ENST00000535410 PCDHB7Q9Y5E2 793 aa13.36□□□□□ -0.27
KNTC1-208ENST00000535410 H3BNC9 293 aa13.35□□□□□ -0.27
KNTC1-208ENST00000535410 NCK2O43639 380 aa13.35□□□□□ -0.27
KNTC1-208ENST00000535410 EDIL3O43854 480 aa13.35□□□□□ -0.27
KNTC1-208ENST00000535410 CCNT1O60563 726 aaKnown RBP13.35□□□□□ -0.27
KNTC1-208ENST00000535410 LPXNO60711 386 aa13.35□□□□□ -0.27
KNTC1-208ENST00000535410 DGKIO75912 1065 aa13.35□□□□□ -0.27
KNTC1-208ENST00000535410 ZSCAN20P17040 1043 aaPredicted RBP13.35□□□□□ -0.27
KNTC1-208ENST00000535410 KIZQ2M2Z5 673 aa13.35□□□□□ -0.27
KNTC1-208ENST00000535410 NAALADL2Q58DX5 795 aa13.35□□□□□ -0.27
KNTC1-208ENST00000535410 SLC24A5Q71RS6 500 aa13.35□□□□□ -0.27
KNTC1-208ENST00000535410 CMTR2Q8IYT2 770 aaKnown RBP13.35□□□□□ -0.27
KNTC1-208ENST00000535410 NECAB1Q8N987 351 aa13.35□□□□□ -0.27
KNTC1-208ENST00000535410 GDPD5Q8WTR4 605 aa13.35□□□□□ -0.27
KNTC1-208ENST00000535410 MRPL38Q96DV4 380 aaKnown RBP13.35□□□□□ -0.27
KNTC1-208ENST00000535410 SCLT1Q96NL6 688 aa13.35□□□□□ -0.27
KNTC1-208ENST00000535410 C17orf80Q9BSJ5 609 aa13.35□□□□□ -0.27
KNTC1-208ENST00000535410 PLVAPQ9BX97 442 aa13.35□□□□□ -0.27
KNTC1-208ENST00000535410 INO80BQ9C086 356 aaPredicted RBP13.35□□□□□ -0.27
KNTC1-208ENST00000535410 UPF2Q9HAU5 1272 aaKnown RBP13.35□□□□□ -0.27
KNTC1-208ENST00000535410 ST3GAL5Q9UNP4 418 aa13.35□□□□□ -0.27
KNTC1-208ENST00000535410 ADGRA3Q8IWK6 1321 aa13.35□□□□□ -0.27
KNTC1-208ENST00000535410 DDX11L8A8MPP1 907 aa13.34□□□□□ -0.27
KNTC1-208ENST00000535410 ZNF862O60290 1169 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms