RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 OSBPL7Q9BZF2 842 aa25.49■■□□□ 1.67
SFSWAP-204ENST00000535399 SEPT9Q9UHD8 586 aaPredicted RBP25.49■■□□□ 1.67
SFSWAP-204ENST00000535399 OTOP2Q7RTS6 562 aa25.48■■□□□ 1.67
SFSWAP-204ENST00000535399 KIAA0319LQ8IZA0 1049 aa25.48■■□□□ 1.67
SFSWAP-204ENST00000535399 NEK9Q8TD19 979 aa25.48■■□□□ 1.67
SFSWAP-204ENST00000535399 FTOQ9C0B1 505 aaKnown RBP eCLIP25.48■■□□□ 1.67
SFSWAP-204ENST00000535399 ZSWIM4Q9H7M6 989 aa25.48■■□□□ 1.67
SFSWAP-204ENST00000535399 TANC1Q9C0D5 1861 aa25.48■■□□□ 1.67
SFSWAP-204ENST00000535399 KAT6AQ92794 2004 aa25.47■■□□□ 1.67
SFSWAP-204ENST00000535399 LAD1O00515 517 aa25.47■■□□□ 1.67
SFSWAP-204ENST00000535399 MAGEB2O15479 319 aa25.47■■□□□ 1.67
SFSWAP-204ENST00000535399 STX6O43752 255 aa25.47■■□□□ 1.67
SFSWAP-204ENST00000535399 HSP90AA1P07900 732 aaKnown RBP25.47■■□□□ 1.67
SFSWAP-204ENST00000535399 FXR2P51116 673 aaKnown RBP eCLIP25.47■■□□□ 1.67
SFSWAP-204ENST00000535399 MRPS6P82932 125 aaKnown RBP25.47■■□□□ 1.67
SFSWAP-204ENST00000535399 TCTN1Q2MV58 587 aa25.47■■□□□ 1.67
SFSWAP-204ENST00000535399 NME8Q8N427 588 aa25.47■■□□□ 1.67
SFSWAP-204ENST00000535399 LINC01465Q8N7H1 131 aa25.47■■□□□ 1.67
SFSWAP-204ENST00000535399 CXXC1Q9P0U4 656 aaPredicted RBP25.47■■□□□ 1.67
SFSWAP-204ENST00000535399 CDY2AQ9Y6F7 541 aa25.47■■□□□ 1.67
SFSWAP-204ENST00000535399 MYH9P35579 1960 aaKnown RBP25.46■■□□□ 1.67
SFSWAP-204ENST00000535399 SOX1O00570 391 aaPredicted RBP25.46■■□□□ 1.67
SFSWAP-204ENST00000535399 LYPLA2O95372 231 aa25.46■■□□□ 1.67
SFSWAP-204ENST00000535399 PRPHP41219 470 aa25.46■■□□□ 1.67
SFSWAP-204ENST00000535399 ATP2C1P98194 919 aaPredicted RBP25.46■■□□□ 1.67
SFSWAP-204ENST00000535399 IL17AQ16552 155 aa25.46■■□□□ 1.67
SFSWAP-204ENST00000535399 MTERF2Q49AM1 385 aa25.46■■□□□ 1.67
SFSWAP-204ENST00000535399 PLA2G4FQ68DD2 849 aa25.46■■□□□ 1.67
SFSWAP-204ENST00000535399 TPH2Q8IWU9 490 aa25.46■■□□□ 1.67
SFSWAP-204ENST00000535399 SH2D3AQ9BRG2 576 aa25.46■■□□□ 1.67
SFSWAP-204ENST00000535399 SCN5AQ14524 2016 aa25.46■■□□□ 1.67
SFSWAP-204ENST00000535399 SPATA31C1P0DKV0 1188 aa25.45■■□□□ 1.66
SFSWAP-204ENST00000535399 FXR1P51114 621 aaKnown RBP eCLIP25.45■■□□□ 1.66
SFSWAP-204ENST00000535399 NPEPPSP55786 919 aa25.45■■□□□ 1.66
SFSWAP-204ENST00000535399 TMEM266Q2M3C6 531 aa25.45■■□□□ 1.66
SFSWAP-204ENST00000535399 ZBTB39O15060 712 aa25.44■■□□□ 1.66
SFSWAP-204ENST00000535399 YWHABP31946 246 aaKnown RBP25.44■■□□□ 1.66
SFSWAP-204ENST00000535399 CLCN3P51790 818 aa25.44■■□□□ 1.66
SFSWAP-204ENST00000535399 TBC1D8BQ0IIM8 1120 aa25.44■■□□□ 1.66
SFSWAP-204ENST00000535399 TMEM62Q0P6H9 643 aa25.44■■□□□ 1.66
SFSWAP-204ENST00000535399 IER5Q5VY09 327 aa25.44■■□□□ 1.66
SFSWAP-204ENST00000535399 EFCAB12Q6NXP0 572 aa25.44■■□□□ 1.66
SFSWAP-204ENST00000535399 CNKSR3Q6P9H4 555 aa25.44■■□□□ 1.66
SFSWAP-204ENST00000535399 LRRC71Q8N4P6 559 aa25.44■■□□□ 1.66
SFSWAP-204ENST00000535399 METTL13Q8N6R0 699 aa25.44■■□□□ 1.66
SFSWAP-204ENST00000535399 ZNF579Q8NAF0 562 aaKnown RBP25.44■■□□□ 1.66
SFSWAP-204ENST00000535399 SPRYD3Q8NCJ5 442 aa25.44■■□□□ 1.66
SFSWAP-204ENST00000535399 TET1Q8NFU7 2136 aa25.44■■□□□ 1.66
SFSWAP-204ENST00000535399 MTIF3Q9H2K0 278 aaKnown RBP25.44■■□□□ 1.66
SFSWAP-204ENST00000535399 CYP26B1Q9NR63 512 aa25.44■■□□□ 1.66
SFSWAP-204ENST00000535399 TRPV2Q9Y5S1 764 aa25.44■■□□□ 1.66
SFSWAP-204ENST00000535399 IGKV6-21A0A0C4DH24 114 aa25.43■■□□□ 1.66
SFSWAP-204ENST00000535399 MED24O75448 989 aa25.43■■□□□ 1.66
SFSWAP-204ENST00000535399 ACTN1P12814 892 aa25.43■■□□□ 1.66
SFSWAP-204ENST00000535399 PDIA5Q14554 519 aa25.43■■□□□ 1.66
SFSWAP-204ENST00000535399 PLEKHG4Q58EX7 1191 aa25.43■■□□□ 1.66
SFSWAP-204ENST00000535399 CATSPER3Q86XQ3 398 aa25.43■■□□□ 1.66
SFSWAP-204ENST00000535399 IGSF22Q8N9C0 903 aa25.43■■□□□ 1.66
SFSWAP-204ENST00000535399 POLR3CQ9BUI4 534 aaPredicted RBP25.43■■□□□ 1.66
SFSWAP-204ENST00000535399 CELF4Q9BZC1 486 aaKnown RBP25.43■■□□□ 1.66
SFSWAP-204ENST00000535399 TUFT1Q9NNX1 390 aa25.43■■□□□ 1.66
SFSWAP-204ENST00000535399 WDR81Q562E7 1941 aa25.43■■□□□ 1.66
SFSWAP-204ENST00000535399 KDM3AQ9Y4C1 1321 aa25.42■■□□□ 1.66
SFSWAP-204ENST00000535399 GHRP10912 638 aa25.42■■□□□ 1.66
SFSWAP-204ENST00000535399 MKRN4PQ13434 485 aaPredicted RBP25.42■■□□□ 1.66
SFSWAP-204ENST00000535399 LPIN1Q14693 890 aa25.42■■□□□ 1.66
SFSWAP-204ENST00000535399 FBXO47Q5MNV8 452 aa25.42■■□□□ 1.66
SFSWAP-204ENST00000535399 FAM173BQ6P4H8 233 aa25.42■■□□□ 1.66
SFSWAP-204ENST00000535399 DTHD1Q6ZMT9 781 aa25.42■■□□□ 1.66
SFSWAP-204ENST00000535399 DBF4BQ8NFT6 615 aa25.42■■□□□ 1.66
SFSWAP-204ENST00000535399 CEP170P1Q96L14 293 aa25.42■■□□□ 1.66
SFSWAP-204ENST00000535399 SUGCTQ9HAC7 445 aa25.42■■□□□ 1.66
SFSWAP-204ENST00000535399 PPME1Q9Y570 386 aa25.42■■□□□ 1.66
SFSWAP-204ENST00000535399 M0QZ92 97 aa25.41■■□□□ 1.66
SFSWAP-204ENST00000535399 MAFO75444 373 aaPredicted RBP25.41■■□□□ 1.66
SFSWAP-204ENST00000535399 BAIAP3O94812 1187 aa25.41■■□□□ 1.66
SFSWAP-204ENST00000535399 VTNP04004 478 aa25.41■■□□□ 1.66
SFSWAP-204ENST00000535399 RPA1P27694 616 aa25.41■■□□□ 1.66
SFSWAP-204ENST00000535399 TMOD1P28289 359 aa25.41■■□□□ 1.66
SFSWAP-204ENST00000535399 FAM109BQ6ICB4 259 aaPredicted RBP25.41■■□□□ 1.66
SFSWAP-204ENST00000535399 OTUD6AQ7L8S5 288 aa25.41■■□□□ 1.66
SFSWAP-204ENST00000535399 ERMNQ8TAM6 284 aa25.41■■□□□ 1.66
SFSWAP-204ENST00000535399 SEPT8Q92599 483 aa25.41■■□□□ 1.66
SFSWAP-204ENST00000535399 LRCH3Q96II8 777 aa25.41■■□□□ 1.66
SFSWAP-204ENST00000535399 LRWD1Q9UFC0 647 aa25.41■■□□□ 1.66
SFSWAP-204ENST00000535399 ZBBXA8MT70 800 aa25.4■■□□□ 1.66
SFSWAP-204ENST00000535399 GPR32O75388 356 aa25.4■■□□□ 1.66
SFSWAP-204ENST00000535399 BMP15O95972 392 aa25.4■■□□□ 1.66
SFSWAP-204ENST00000535399 DRP2Q13474 957 aa25.4■■□□□ 1.66
SFSWAP-204ENST00000535399 SF3A1Q15459 793 aaKnown RBP25.4■■□□□ 1.66
SFSWAP-204ENST00000535399 ARL6IP4Q66PJ3 421 aaKnown RBP25.4■■□□□ 1.66
SFSWAP-204ENST00000535399 RAB34Q9BZG1 259 aa25.4■■□□□ 1.66
SFSWAP-204ENST00000535399 ZSCAN16Q9H4T2 348 aaPredicted RBP25.4■■□□□ 1.66
SFSWAP-204ENST00000535399 DHX33Q9H6R0 707 aaKnown RBP25.4■■□□□ 1.66
SFSWAP-204ENST00000535399 AGO3Q9H9G7 860 aaKnown RBP25.4■■□□□ 1.66
SFSWAP-204ENST00000535399 CDHR5Q9HBB8 845 aa25.4■■□□□ 1.66
SFSWAP-204ENST00000535399 ANKEF1Q9NU02 776 aa25.4■■□□□ 1.66
SFSWAP-204ENST00000535399 A0A087WWV3 80 aa25.39■■□□□ 1.66
SFSWAP-204ENST00000535399 ABHD14A-ACY1A0A1B0GW23 586 aa25.39■■□□□ 1.66
SFSWAP-204ENST00000535399 SMAD3P84022 425 aaKnown RBP25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms