RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 ZNF568Q3ZCX4 644 aa7.37□□□□□ -1.23
PRKDC-205ENST00000535375 GLB1LQ6UWU2 654 aa7.37□□□□□ -1.23
PRKDC-205ENST00000535375 KIAA0907Q7Z7F0 614 aaPredicted RBP7.37□□□□□ -1.23
PRKDC-205ENST00000535375 KIF18BQ86Y91 864 aa7.37□□□□□ -1.23
PRKDC-205ENST00000535375 PPM1KQ8N3J5 372 aa7.37□□□□□ -1.23
PRKDC-205ENST00000535375 KIAA1958Q8N8K9 716 aa7.37□□□□□ -1.23
PRKDC-205ENST00000535375 MFSD3Q96ES6 412 aa7.37□□□□□ -1.23
PRKDC-205ENST00000535375 TBX22Q9Y458 520 aa7.37□□□□□ -1.23
PRKDC-205ENST00000535375 NPEPPSL1A6NEC2 478 aa7.36□□□□□ -1.23
PRKDC-205ENST00000535375 K7ESM1 405 aa7.36□□□□□ -1.23
PRKDC-205ENST00000535375 MPIG6BO95866 241 aa7.36□□□□□ -1.23
PRKDC-205ENST00000535375 CSF2RBP32927 897 aa7.36□□□□□ -1.23
PRKDC-205ENST00000535375 BUD31P41223 144 aaPredicted RBP7.36□□□□□ -1.23
PRKDC-205ENST00000535375 STILQ15468 1287 aa7.36□□□□□ -1.23
PRKDC-205ENST00000535375 TBC1D10BQ4KMP7 808 aaPredicted RBP7.36□□□□□ -1.23
PRKDC-205ENST00000535375 DALRD3Q5D0E6 543 aaKnown RBP7.36□□□□□ -1.23
PRKDC-205ENST00000535375 GPR155Q7Z3F1 870 aa7.36□□□□□ -1.23
PRKDC-205ENST00000535375 KATNBL1Q9H079 304 aa7.36□□□□□ -1.23
PRKDC-205ENST00000535375 SLKQ9H2G2 1235 aaPredicted RBP7.36□□□□□ -1.23
PRKDC-205ENST00000535375 HMGCRP04035 888 aa7.35□□□□□ -1.23
PRKDC-205ENST00000535375 APEX1P27695 318 aaKnown RBP7.35□□□□□ -1.23
PRKDC-205ENST00000535375 SCNN1BP51168 640 aa7.35□□□□□ -1.23
PRKDC-205ENST00000535375 KCNQ1P51787 676 aa7.35□□□□□ -1.23
PRKDC-205ENST00000535375 CD83Q01151 205 aa7.35□□□□□ -1.23
PRKDC-205ENST00000535375 TOP3AQ13472 1001 aaPredicted RBP7.35□□□□□ -1.23
PRKDC-205ENST00000535375 NME9Q86XW9 330 aa7.35□□□□□ -1.23
PRKDC-205ENST00000535375 PASD1Q8IV76 773 aa7.35□□□□□ -1.23
PRKDC-205ENST00000535375 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.35□□□□□ -1.23
PRKDC-205ENST00000535375 UBA6A0AVT1 1052 aaPredicted RBP7.34□□□□□ -1.23
PRKDC-205ENST00000535375 DVL2O14641 736 aa7.34□□□□□ -1.23
PRKDC-205ENST00000535375 CLSTN1O94985 981 aa7.34□□□□□ -1.23
PRKDC-205ENST00000535375 ITGB3P05106 788 aa7.34□□□□□ -1.23
PRKDC-205ENST00000535375 SLC9A1P19634 815 aa7.34□□□□□ -1.23
PRKDC-205ENST00000535375 POU3F2P20265 443 aaPredicted RBP7.34□□□□□ -1.23
PRKDC-205ENST00000535375 ETV4P43268 484 aa7.34□□□□□ -1.23
PRKDC-205ENST00000535375 ROM1Q03395 351 aa7.34□□□□□ -1.23
PRKDC-205ENST00000535375 MAP3K12Q12852 859 aa7.34□□□□□ -1.23
PRKDC-205ENST00000535375 ZMAT1Q5H9K5 638 aa7.34□□□□□ -1.23
PRKDC-205ENST00000535375 GIMAP6Q6P9H5 292 aa7.34□□□□□ -1.23
PRKDC-205ENST00000535375 SCYL1Q96KG9 808 aa7.34□□□□□ -1.23
PRKDC-205ENST00000535375 FOXB1Q99853 325 aa7.34□□□□□ -1.23
PRKDC-205ENST00000535375 ORAI3Q9BRQ5 295 aa7.34□□□□□ -1.23
PRKDC-205ENST00000535375 TARS2Q9BW92 718 aaKnown RBP7.34□□□□□ -1.23
PRKDC-205ENST00000535375 ZDHHC5Q9C0B5 715 aa7.34□□□□□ -1.23
PRKDC-205ENST00000535375 TOMM22Q9NS69 142 aa7.34□□□□□ -1.23
PRKDC-205ENST00000535375 CDC42EP3Q9UKI2 254 aa7.34□□□□□ -1.23
PRKDC-205ENST00000535375 CNOT11Q9UKZ1 510 aaKnown RBP7.34□□□□□ -1.23
PRKDC-205ENST00000535375 A0A0G2JNJ9 132 aa7.33□□□□□ -1.24
PRKDC-205ENST00000535375 F2P00734 622 aa7.33□□□□□ -1.24
PRKDC-205ENST00000535375 ZNF888P0CJ79 500 aaPredicted RBP7.33□□□□□ -1.24
PRKDC-205ENST00000535375 MEOX1P50221 254 aa7.33□□□□□ -1.24
PRKDC-205ENST00000535375 GYS2P54840 703 aa7.33□□□□□ -1.24
PRKDC-205ENST00000535375 RRADP55042 308 aa7.33□□□□□ -1.24
PRKDC-205ENST00000535375 SLC6A3Q01959 620 aa7.33□□□□□ -1.24
PRKDC-205ENST00000535375 ALDH6A1Q02252 535 aaKnown RBP7.33□□□□□ -1.24
PRKDC-205ENST00000535375 MOGSQ13724 837 aa7.33□□□□□ -1.24
PRKDC-205ENST00000535375 PLEKHG4Q58EX7 1191 aa7.33□□□□□ -1.24
PRKDC-205ENST00000535375 TTC38Q5R3I4 469 aa7.33□□□□□ -1.24
PRKDC-205ENST00000535375 GRAMD4Q6IC98 578 aa7.33□□□□□ -1.24
PRKDC-205ENST00000535375 NXPE1Q8N323 547 aa7.33□□□□□ -1.24
PRKDC-205ENST00000535375 TUBGCP5Q96RT8 1024 aa7.33□□□□□ -1.24
PRKDC-205ENST00000535375 MTFR1LQ9H019 292 aa7.33□□□□□ -1.24
PRKDC-205ENST00000535375 OXSMQ9NWU1 459 aa7.33□□□□□ -1.24
PRKDC-205ENST00000535375 Q9UFV3 132 aa7.33□□□□□ -1.24
PRKDC-205ENST00000535375 SPO11Q9Y5K1 396 aa7.33□□□□□ -1.24
PRKDC-205ENST00000535375 MYCLP1P12525 358 aaPredicted RBP7.32□□□□□ -1.24
PRKDC-205ENST00000535375 ATP2A2P16615 1042 aaKnown RBP7.32□□□□□ -1.24
PRKDC-205ENST00000535375 PTX3P26022 381 aaPredicted RBP7.32□□□□□ -1.24
PRKDC-205ENST00000535375 HSD3B2P26439 372 aa7.32□□□□□ -1.24
PRKDC-205ENST00000535375 EPHB4P54760 987 aa7.32□□□□□ -1.24
PRKDC-205ENST00000535375 OCRLQ01968 901 aa7.32□□□□□ -1.24
PRKDC-205ENST00000535375 ADCY1Q08828 1119 aa7.32□□□□□ -1.24
PRKDC-205ENST00000535375 PCBP1Q15365 356 aaKnown RBP eCLIP7.32□□□□□ -1.24
PRKDC-205ENST00000535375 SKOR2Q2VWA4 1001 aaPredicted RBP7.32□□□□□ -1.24
PRKDC-205ENST00000535375 KANK2Q63ZY3 851 aa7.32□□□□□ -1.24
PRKDC-205ENST00000535375 SLFN13Q68D06 897 aa7.32□□□□□ -1.24
PRKDC-205ENST00000535375 SLFN12LQ6IEE8 588 aa7.32□□□□□ -1.24
PRKDC-205ENST00000535375 SDE2Q6IQ49 451 aa7.32□□□□□ -1.24
PRKDC-205ENST00000535375 RTN4RL1Q86UN2 441 aaPredicted RBP7.32□□□□□ -1.24
PRKDC-205ENST00000535375 ZZZ3Q8IYH5 903 aa7.32□□□□□ -1.24
PRKDC-205ENST00000535375 RTKN2Q8IZC4 609 aa7.32□□□□□ -1.24
PRKDC-205ENST00000535375 OR2W6PQ8NHA6 318 aa7.32□□□□□ -1.24
PRKDC-205ENST00000535375 FOXRED1Q96CU9 486 aaPredicted RBP7.32□□□□□ -1.24
PRKDC-205ENST00000535375 LOXL4Q96JB6 756 aa7.32□□□□□ -1.24
PRKDC-205ENST00000535375 ELF4Q99607 663 aaPredicted RBP7.32□□□□□ -1.24
PRKDC-205ENST00000535375 THG1LQ9NWX6 298 aaKnown RBP7.32□□□□□ -1.24
PRKDC-205ENST00000535375 SLC4A7Q9Y6M7 1214 aa7.32□□□□□ -1.24
PRKDC-205ENST00000535375 ZNF891A8MT65 544 aaPredicted RBP7.31□□□□□ -1.24
PRKDC-205ENST00000535375 KPNA1P52294 538 aaPredicted RBP7.31□□□□□ -1.24
PRKDC-205ENST00000535375 EIF4HQ15056 248 aaKnown RBP7.31□□□□□ -1.24
PRKDC-205ENST00000535375 EPHA7Q15375 998 aa7.31□□□□□ -1.24
PRKDC-205ENST00000535375 TIGD7Q6NT04 549 aaPredicted RBP7.31□□□□□ -1.24
PRKDC-205ENST00000535375 LIMS2Q7Z4I7 341 aa7.31□□□□□ -1.24
PRKDC-205ENST00000535375 PRRT2Q7Z6L0 340 aaPredicted RBP7.31□□□□□ -1.24
PRKDC-205ENST00000535375 CHTF18Q8WVB6 975 aa7.31□□□□□ -1.24
PRKDC-205ENST00000535375 LEO1Q8WVC0 666 aaPredicted RBP7.31□□□□□ -1.24
PRKDC-205ENST00000535375 MAML3Q96JK9 1138 aa7.31□□□□□ -1.24
PRKDC-205ENST00000535375 C16orf92Q96LL3 132 aa7.31□□□□□ -1.24
PRKDC-205ENST00000535375 SEC61A2Q9H9S3 476 aa7.31□□□□□ -1.24
PRKDC-205ENST00000535375 PTPN22Q9Y2R2 807 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms