RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 ZRSR1Q15695 479 aaKnown RBP13.69□□□□□ -0.22
SCARB1-204ENST00000535005 PDXDC2PQ6P474 469 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 POTEGQ6S5H5 508 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 KCNK18Q7Z418 384 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 ELOA2Q8IYF1 753 aaPredicted RBP13.69□□□□□ -0.22
SCARB1-204ENST00000535005 C17orf53Q8N3J3 647 aaPredicted RBP13.69□□□□□ -0.22
SCARB1-204ENST00000535005 PDILTQ8N807 584 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 LRRC15Q8TF66 581 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 ARID3AQ99856 593 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 C16orf70Q9BSU1 422 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 ANKEF1Q9NU02 776 aa13.69□□□□□ -0.22
SCARB1-204ENST00000535005 ACTN4O43707 911 aaKnown RBP13.68□□□□□ -0.22
SCARB1-204ENST00000535005 PGK1P00558 417 aa13.68□□□□□ -0.22
SCARB1-204ENST00000535005 C6orf222P0C671 652 aaPredicted RBP13.68□□□□□ -0.22
SCARB1-204ENST00000535005 CCL5P13501 91 aa13.68□□□□□ -0.22
SCARB1-204ENST00000535005 TYRO3Q06418 890 aa13.68□□□□□ -0.22
SCARB1-204ENST00000535005 LONRF3Q496Y0 759 aa13.68□□□□□ -0.22
SCARB1-204ENST00000535005 XKR3Q5GH77 459 aa13.68□□□□□ -0.22
SCARB1-204ENST00000535005 CCSAPQ6IQ19 270 aaPredicted RBP13.68□□□□□ -0.22
SCARB1-204ENST00000535005 KRBA2Q6ZNG9 492 aa13.68□□□□□ -0.22
SCARB1-204ENST00000535005 RAD54LQ92698 747 aa13.68□□□□□ -0.22
SCARB1-204ENST00000535005 GLG1Q92896 1179 aa13.68□□□□□ -0.22
SCARB1-204ENST00000535005 DHX58Q96C10 678 aa13.68□□□□□ -0.22
SCARB1-204ENST00000535005 PLIN2Q99541 437 aa13.68□□□□□ -0.22
SCARB1-204ENST00000535005 MAGEF1Q9HAY2 307 aa13.68□□□□□ -0.22
SCARB1-204ENST00000535005 DACT1Q9NYF0 836 aa13.68□□□□□ -0.22
SCARB1-204ENST00000535005 ERAP1Q9NZ08 941 aa13.68□□□□□ -0.22
SCARB1-204ENST00000535005 DBR1Q9UK59 544 aaKnown RBP13.68□□□□□ -0.22
SCARB1-204ENST00000535005 MYADML2A6NDP7 307 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 ZEB2O60315 1214 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 EYA4O95677 639 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 F2P00734 622 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 PSMC6P62333 389 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 IRX5P78411 483 aaPredicted RBP13.67□□□□□ -0.22
SCARB1-204ENST00000535005 BEX3Q00994 111 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 DHX8Q14562 1220 aaKnown RBP13.67□□□□□ -0.22
SCARB1-204ENST00000535005 MTFR1Q15390 333 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 GNASQ5JWF2 1037 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 KANK3Q6NY19 840 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 OTUD6AQ7L8S5 288 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 RNF180Q86T96 592 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 CCDC112Q8NEF3 446 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 TSC1Q92574 1164 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 FAM167AQ96KS9 214 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 KCND1Q9NSA2 647 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 NRBP2Q9NSY0 501 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 SERTAD1Q9UHV2 236 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 E9PMD0 336 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 H3BRB1 525 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 KIF2AO00139 706 aaPredicted RBP13.67□□□□□ -0.22
SCARB1-204ENST00000535005 AP5Z1O43299 807 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 KINO60870 393 aaKnown RBP13.67□□□□□ -0.22
SCARB1-204ENST00000535005 OATP04181 439 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 YWHABP31946 246 aaKnown RBP13.67□□□□□ -0.22
SCARB1-204ENST00000535005 ZNF75DP51815 510 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 PRKCEQ02156 737 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 ANO5Q75V66 913 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 SH3RF1Q7Z6J0 888 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 TRIM50Q86XT4 487 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 SYT2Q8N9I0 419 aaPredicted RBP13.67□□□□□ -0.22
SCARB1-204ENST00000535005 PCSK9Q8NBP7 692 aaKnown RBP13.67□□□□□ -0.22
SCARB1-204ENST00000535005 ARRDC4Q8NCT1 418 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 ATP8B4Q8TF62 1192 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 LARP4BQ92615 738 aaKnown RBP13.67□□□□□ -0.22
SCARB1-204ENST00000535005 TSEN34Q9BSV6 310 aaKnown RBP13.67□□□□□ -0.22
SCARB1-204ENST00000535005 NIFKQ9BYG3 293 aaKnown RBP13.67□□□□□ -0.22
SCARB1-204ENST00000535005 RNF208Q9H0X6 261 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 TUT1Q9H6E5 874 aaKnown RBP13.67□□□□□ -0.22
SCARB1-204ENST00000535005 KBTBD4Q9NVX7 518 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 ZNF215Q9UL58 517 aaPredicted RBP13.67□□□□□ -0.22
SCARB1-204ENST00000535005 PPME1Q9Y570 386 aa13.67□□□□□ -0.22
SCARB1-204ENST00000535005 HAS3O00219 553 aa13.66□□□□□ -0.22
SCARB1-204ENST00000535005 ZBTB39O15060 712 aa13.66□□□□□ -0.22
SCARB1-204ENST00000535005 PLA2G4BP0C869 781 aa13.66□□□□□ -0.22
SCARB1-204ENST00000535005 CAPN2P17655 700 aa13.66□□□□□ -0.22
SCARB1-204ENST00000535005 SLC12A3P55017 1021 aa13.66□□□□□ -0.22
SCARB1-204ENST00000535005 PURAQ00577 322 aaKnown RBP13.66□□□□□ -0.22
SCARB1-204ENST00000535005 PLCB4Q15147 1175 aa13.66□□□□□ -0.22
SCARB1-204ENST00000535005 LRRC41Q15345 812 aa13.66□□□□□ -0.22
SCARB1-204ENST00000535005 SARM1Q6SZW1 724 aa13.66□□□□□ -0.22
SCARB1-204ENST00000535005 CEP57L1Q8IYX8 460 aa13.66□□□□□ -0.22
SCARB1-204ENST00000535005 CNNM3Q8NE01 707 aa13.66□□□□□ -0.22
SCARB1-204ENST00000535005 PIGOQ8TEQ8 1089 aa13.66□□□□□ -0.22
SCARB1-204ENST00000535005 BBXQ8WY36 941 aaPredicted RBP13.66□□□□□ -0.22
SCARB1-204ENST00000535005 KAT2BQ92831 832 aa13.66□□□□□ -0.22
SCARB1-204ENST00000535005 CCDC34Q96HJ3 373 aa13.66□□□□□ -0.22
SCARB1-204ENST00000535005 TNMDQ9H2S6 317 aa13.66□□□□□ -0.22
SCARB1-204ENST00000535005 WDR81Q562E7 1941 aa13.66□□□□□ -0.22
SCARB1-204ENST00000535005 CCDC66A2RUB6 948 aa13.65□□□□□ -0.22
SCARB1-204ENST00000535005 HBP1O60381 514 aa13.65□□□□□ -0.22
SCARB1-204ENST00000535005 GJB1P08034 283 aa13.65□□□□□ -0.22
SCARB1-204ENST00000535005 MYL3P08590 195 aa13.65□□□□□ -0.22
SCARB1-204ENST00000535005 ZNF286BP0CG31 522 aa13.65□□□□□ -0.22
SCARB1-204ENST00000535005 RARRES1P49788 294 aa13.65□□□□□ -0.22
SCARB1-204ENST00000535005 MCM6Q14566 821 aa13.65□□□□□ -0.22
SCARB1-204ENST00000535005 TARBP2Q15633 366 aaKnown RBP13.65□□□□□ -0.22
SCARB1-204ENST00000535005 SV2BQ7L1I2 683 aa13.65□□□□□ -0.22
SCARB1-204ENST00000535005 CKAP2LQ8IYA6 745 aa13.65□□□□□ -0.22
SCARB1-204ENST00000535005 PAGE5Q96GU1 130 aa13.65□□□□□ -0.22
SCARB1-204ENST00000535005 MTRQ99707 1265 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms