RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 ATP4AP20648 1035 aa22.52■■□□□ 1.2
TNFRSF1A-205ENST00000534885 MAP2K5Q13163 448 aa22.52■■□□□ 1.2
TNFRSF1A-205ENST00000534885 DEFB115Q30KQ5 88 aa22.52■■□□□ 1.2
TNFRSF1A-205ENST00000534885 GJC2Q5T442 439 aaPredicted RBP22.52■■□□□ 1.2
TNFRSF1A-205ENST00000534885 CENPPQ6IPU0 288 aa22.52■■□□□ 1.2
TNFRSF1A-205ENST00000534885 SCFD1Q8WVM8 642 aa22.52■■□□□ 1.2
TNFRSF1A-205ENST00000534885 EEF2KMTQ96G04 330 aa22.52■■□□□ 1.2
TNFRSF1A-205ENST00000534885 TINF2Q9BSI4 451 aa22.52■■□□□ 1.2
TNFRSF1A-205ENST00000534885 RASSF10A6NK89 507 aa22.51■■□□□ 1.19
TNFRSF1A-205ENST00000534885 YY1P25490 414 aa22.51■■□□□ 1.19
TNFRSF1A-205ENST00000534885 TCF7P36402 384 aaPredicted RBP22.51■■□□□ 1.19
TNFRSF1A-205ENST00000534885 ZNF131P52739 623 aa22.51■■□□□ 1.19
TNFRSF1A-205ENST00000534885 DHX37Q8IY37 1157 aaKnown RBP22.51■■□□□ 1.19
TNFRSF1A-205ENST00000534885 CAPNS2Q96L46 248 aa22.51■■□□□ 1.19
TNFRSF1A-205ENST00000534885 PARVGQ9HBI0 331 aa22.51■■□□□ 1.19
TNFRSF1A-205ENST00000534885 BICDL2A1A5D9 508 aa22.51■■□□□ 1.19
TNFRSF1A-205ENST00000534885 GAP43P17677 238 aa22.51■■□□□ 1.19
TNFRSF1A-205ENST00000534885 OTUD6AQ7L8S5 288 aa22.51■■□□□ 1.19
TNFRSF1A-205ENST00000534885 MYCT1Q8N699 235 aa22.51■■□□□ 1.19
TNFRSF1A-205ENST00000534885 SEPT1Q8WYJ6 367 aa22.51■■□□□ 1.19
TNFRSF1A-205ENST00000534885 SPATA33Q96N06 139 aa22.51■■□□□ 1.19
TNFRSF1A-205ENST00000534885 NAP1L5Q96NT1 182 aaPredicted RBP22.51■■□□□ 1.19
TNFRSF1A-205ENST00000534885 GPR20Q99678 358 aa22.51■■□□□ 1.19
TNFRSF1A-205ENST00000534885 MRPL44Q9H9J2 332 aaKnown RBP22.51■■□□□ 1.19
TNFRSF1A-205ENST00000534885 OLFML3Q9NRN5 406 aa22.51■■□□□ 1.19
TNFRSF1A-205ENST00000534885 CREBZFQ9NS37 354 aa22.51■■□□□ 1.19
TNFRSF1A-205ENST00000534885 SEPT9Q9UHD8 586 aaPredicted RBP22.51■■□□□ 1.19
TNFRSF1A-205ENST00000534885 CENPFP49454 3210 aa22.5■■□□□ 1.19
TNFRSF1A-205ENST00000534885 CTGFP29279 349 aa22.5■■□□□ 1.19
TNFRSF1A-205ENST00000534885 ADCYAP1R1P41586 468 aa22.5■■□□□ 1.19
TNFRSF1A-205ENST00000534885 UBASH3AP57075 661 aa22.5■■□□□ 1.19
TNFRSF1A-205ENST00000534885 NELFCDQ8IXH7 590 aa22.5■■□□□ 1.19
TNFRSF1A-205ENST00000534885 CEP170P1Q96L14 293 aa22.5■■□□□ 1.19
TNFRSF1A-205ENST00000534885 SLC5A4Q9NY91 659 aa22.5■■□□□ 1.19
TNFRSF1A-205ENST00000534885 ZSWIM8A7E2V4 1837 aa22.5■■□□□ 1.19
TNFRSF1A-205ENST00000534885 MYBP10242 640 aa22.5■■□□□ 1.19
TNFRSF1A-205ENST00000534885 XKR3Q5GH77 459 aa22.5■■□□□ 1.19
TNFRSF1A-205ENST00000534885 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.5■■□□□ 1.19
TNFRSF1A-205ENST00000534885 IRF2BP1Q8IU81 584 aa22.5■■□□□ 1.19
TNFRSF1A-205ENST00000534885 CSGALNACT2Q8N6G5 542 aa22.5■■□□□ 1.19
TNFRSF1A-205ENST00000534885 FIZ1Q96SL8 496 aa22.5■■□□□ 1.19
TNFRSF1A-205ENST00000534885 SRRTQ9BXP5 876 aaKnown RBP22.5■■□□□ 1.19
TNFRSF1A-205ENST00000534885 MGAMO43451 1857 aa22.49■■□□□ 1.19
TNFRSF1A-205ENST00000534885 NOP56O00567 594 aaKnown RBP22.49■■□□□ 1.19
TNFRSF1A-205ENST00000534885 CDC25BP30305 580 aa22.49■■□□□ 1.19
TNFRSF1A-205ENST00000534885 APLP1P51693 650 aa22.49■■□□□ 1.19
TNFRSF1A-205ENST00000534885 EPM2AIP1Q7L775 607 aaPredicted RBP22.49■■□□□ 1.19
TNFRSF1A-205ENST00000534885 APTXQ7Z2E3 356 aaKnown RBP22.49■■□□□ 1.19
TNFRSF1A-205ENST00000534885 USP6NLQ92738 828 aa22.49■■□□□ 1.19
TNFRSF1A-205ENST00000534885 GPRC5CQ9NQ84 441 aa22.49■■□□□ 1.19
TNFRSF1A-205ENST00000534885 FLRT1Q9NZU1 646 aa22.49■■□□□ 1.19
TNFRSF1A-205ENST00000534885 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.48■■□□□ 1.19
TNFRSF1A-205ENST00000534885 RBM47A0AV96 593 aaKnown RBP22.48■■□□□ 1.19
TNFRSF1A-205ENST00000534885 NMT1P30419 496 aaKnown RBP22.48■■□□□ 1.19
TNFRSF1A-205ENST00000534885 ODR4Q5SWX8 454 aa22.48■■□□□ 1.19
TNFRSF1A-205ENST00000534885 TRIM50Q86XT4 487 aa22.48■■□□□ 1.19
TNFRSF1A-205ENST00000534885 DRC7Q8IY82 874 aa22.48■■□□□ 1.19
TNFRSF1A-205ENST00000534885 INTS13Q9NVM9 706 aa22.48■■□□□ 1.19
TNFRSF1A-205ENST00000534885 TNPO2O14787 897 aaKnown RBP22.48■■□□□ 1.19
TNFRSF1A-205ENST00000534885 GCNT3O95395 438 aa22.48■■□□□ 1.19
TNFRSF1A-205ENST00000534885 OATP04181 439 aa22.48■■□□□ 1.19
TNFRSF1A-205ENST00000534885 HOXC6P09630 235 aa22.48■■□□□ 1.19
TNFRSF1A-205ENST00000534885 STAT5BP51692 787 aa22.48■■□□□ 1.19
TNFRSF1A-205ENST00000534885 ARHGAP1Q07960 439 aa22.48■■□□□ 1.19
TNFRSF1A-205ENST00000534885 ZCWPW2Q504Y3 356 aa22.48■■□□□ 1.19
TNFRSF1A-205ENST00000534885 ABHD16BQ9H3Z7 469 aa22.48■■□□□ 1.19
TNFRSF1A-205ENST00000534885 CYP26B1Q9NR63 512 aa22.48■■□□□ 1.19
TNFRSF1A-205ENST00000534885 SEL1LQ9UBV2 794 aa22.48■■□□□ 1.19
TNFRSF1A-205ENST00000534885 GJD2Q9UKL4 321 aa22.48■■□□□ 1.19
TNFRSF1A-205ENST00000534885 PRPF6O94906 941 aaKnown RBP22.47■■□□□ 1.19
TNFRSF1A-205ENST00000534885 ALDH1A1P00352 501 aa22.47■■□□□ 1.19
TNFRSF1A-205ENST00000534885 PTMAP06454 111 aaKnown RBP22.47■■□□□ 1.19
TNFRSF1A-205ENST00000534885 HOXD13P35453 343 aa22.47■■□□□ 1.19
TNFRSF1A-205ENST00000534885 ACVR2BQ13705 512 aa22.47■■□□□ 1.19
TNFRSF1A-205ENST00000534885 CCL14Q16627 93 aa22.47■■□□□ 1.19
TNFRSF1A-205ENST00000534885 AFAP1L1Q8TED9 768 aa22.47■■□□□ 1.19
TNFRSF1A-205ENST00000534885 TRIM44Q96DX7 344 aaPredicted RBP22.47■■□□□ 1.19
TNFRSF1A-205ENST00000534885 KCTD10Q9H3F6 313 aa22.47■■□□□ 1.19
TNFRSF1A-205ENST00000534885 ZHX1Q9UKY1 873 aaPredicted RBP22.47■■□□□ 1.19
TNFRSF1A-205ENST00000534885 KCNJ18B7U540 433 aa22.46■■□□□ 1.19
TNFRSF1A-205ENST00000534885 CYP2B6P20813 491 aa22.46■■□□□ 1.19
TNFRSF1A-205ENST00000534885 LRRC63Q05C16 580 aa22.46■■□□□ 1.19
TNFRSF1A-205ENST00000534885 KCNJ12Q14500 433 aa22.46■■□□□ 1.19
TNFRSF1A-205ENST00000534885 MTERF2Q49AM1 385 aa22.46■■□□□ 1.19
TNFRSF1A-205ENST00000534885 TCP11X2Q5H9J9 407 aa22.46■■□□□ 1.19
TNFRSF1A-205ENST00000534885 FAM160B1Q5W0V3 765 aa22.46■■□□□ 1.19
TNFRSF1A-205ENST00000534885 FAM178BQ8IXR5 827 aa22.46■■□□□ 1.19
TNFRSF1A-205ENST00000534885 THAP9Q9H5L6 903 aa22.46■■□□□ 1.19
TNFRSF1A-205ENST00000534885 NRBP1Q9UHY1 535 aa22.46■■□□□ 1.19
TNFRSF1A-205ENST00000534885 KCNA1Q09470 495 aa22.46■■□□□ 1.19
TNFRSF1A-205ENST00000534885 PTPN21Q16825 1174 aa22.46■■□□□ 1.19
TNFRSF1A-205ENST00000534885 ZC2HC1CQ53FD0 456 aaPredicted RBP22.46■■□□□ 1.19
TNFRSF1A-205ENST00000534885 CREBRFQ8IUR6 639 aa22.46■■□□□ 1.19
TNFRSF1A-205ENST00000534885 MSL3Q8N5Y2 521 aaKnown RBP22.46■■□□□ 1.19
TNFRSF1A-205ENST00000534885 ARHGAP39Q9C0H5 1083 aa22.46■■□□□ 1.19
TNFRSF1A-205ENST00000534885 AZI2Q9H6S1 392 aa22.46■■□□□ 1.19
TNFRSF1A-205ENST00000534885 LGR5O75473 907 aa22.45■■□□□ 1.18
TNFRSF1A-205ENST00000534885 KIF20AO95235 890 aa22.45■■□□□ 1.18
TNFRSF1A-205ENST00000534885 SOX10P56693 466 aa22.45■■□□□ 1.18
TNFRSF1A-205ENST00000534885 KRT31Q15323 416 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms