RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 TRIM61Q5EBN2 209 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 C9orf50Q5SZB4 431 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 C22orf34Q6ZV56 151 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 ZAR1Q86SH2 424 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 CRACR2BQ8N4Y2 399 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 GIMAP7Q8NHV1 300 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 SLC7A14Q8TBB6 771 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 C1orf159Q96HA4 380 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 CHAMP1Q96JM3 812 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 MFSD14AQ96MC6 490 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 DEFB118Q96PH6 123 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 LBHD1Q9BQE6 289 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 MCMBPQ9BTE3 642 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 FAM126AQ9BYI3 521 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 PRDM12Q9H4Q4 367 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 C7orf69Q9H7B7 122 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 CHST7Q9NS84 486 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 GGA3Q9NZ52 723 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 RIPOR2Q9Y4F9 1068 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 SPTBN2O15020 2390 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 DOPEY1Q5JWR5 2465 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 COL3A1P02461 1466 aaPredicted RBP6.02□□□□□ -1.44
ECHDC1-223ENST00000534442 RIC1Q4ADV7 1423 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 GSG1L2A8MUP6 293 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 C1QTNF9BB2RNN3 333 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 H0Y8X5 98 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 MEIS1O00470 390 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 SCG5P05408 212 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 ZNF865P0CJ78 1059 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 HOXC12P31275 282 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 STAT3P40763 770 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 KIR3DL1P43629 444 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 TNK2Q07912 1038 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 MAP4K2Q12851 820 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 DENND5AQ6IQ26 1287 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 TMEM145Q8NBT3 493 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 STAG1Q8WVM7 1258 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 RAPGEF4Q8WZA2 1011 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 TBC1D32Q96NH3 1257 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 TRIM39Q9HCM9 518 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 CYP26B1Q9NR63 512 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 NARFQ9UHQ1 456 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 KCNH3Q9ULD8 1083 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 GPR55Q9Y2T6 319 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 SF3B6Q9Y3B4 125 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 CAPN6Q9Y6Q1 641 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 U3KQE9 123 aa6.02□□□□□ -1.45
ECHDC1-223ENST00000534442 ASTN2O75129 1339 aaPredicted RBP6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 TTC21BQ7Z4L5 1316 aa6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 FAM170BA6NMN3 283 aa6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 DNAJC8O75937 253 aaPredicted RBP6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 SNRPB2P08579 225 aaKnown RBP6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 PRMT2P55345 433 aa6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 AMPD2Q01433 879 aa6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 PRSS53Q2L4Q9 553 aa6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 DPY19L1Q2PZI1 675 aa6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 SLC35F1Q5T1Q4 408 aa6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 USHBP1Q8N6Y0 703 aa6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 KREMEN2Q8NCW0 462 aa6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 GSTCDQ8NEC7 633 aa6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 CHAC2Q8WUX2 184 aa6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 KCTD13Q8WZ19 329 aa6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 ATOH1Q92858 354 aaPredicted RBP6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 CCDC140Q96MF4 163 aa6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 DSCC1Q9BVC3 393 aa6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 TARS2Q9BW92 718 aaKnown RBP6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 HDAC8Q9BY41 377 aa6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 SLC52A2Q9HAB3 445 aa6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 SFMBT1Q9UHJ3 866 aa6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 GTF2IRD1Q9UHL9 959 aa6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 RAXQ9Y2V3 346 aa6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 ABCA12Q86UK0 2595 aa6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 COL4A3Q01955 1670 aa6.01□□□□□ -1.45
ECHDC1-223ENST00000534442 CHD7Q9P2D1 2997 aa6□□□□□ -1.45
ECHDC1-223ENST00000534442 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6□□□□□ -1.45
ECHDC1-223ENST00000534442 ERC2O15083 957 aa6□□□□□ -1.45
ECHDC1-223ENST00000534442 NPHP1O15259 732 aa6□□□□□ -1.45
ECHDC1-223ENST00000534442 PPIP5K2O43314 1243 aa6□□□□□ -1.45
ECHDC1-223ENST00000534442 PDE8AO60658 829 aa6□□□□□ -1.45
ECHDC1-223ENST00000534442 RAD17O75943 681 aa6□□□□□ -1.45
ECHDC1-223ENST00000534442 SRFP11831 508 aa6□□□□□ -1.45
ECHDC1-223ENST00000534442 ECI1P42126 302 aa6□□□□□ -1.45
ECHDC1-223ENST00000534442 KCNJ6P48051 423 aa6□□□□□ -1.45
ECHDC1-223ENST00000534442 GABREP78334 506 aa6□□□□□ -1.45
ECHDC1-223ENST00000534442 CRTC3Q6UUV7 619 aa6□□□□□ -1.45
ECHDC1-223ENST00000534442 ZNF765Q7L2R6 523 aa6□□□□□ -1.45
ECHDC1-223ENST00000534442 BRAPQ7Z569 592 aa6□□□□□ -1.45
ECHDC1-223ENST00000534442 FGD2Q7Z6J4 655 aa6□□□□□ -1.45
ECHDC1-223ENST00000534442 RNF180Q86T96 592 aa6□□□□□ -1.45
ECHDC1-223ENST00000534442 LRRTM3Q86VH5 581 aa6□□□□□ -1.45
ECHDC1-223ENST00000534442 JAMLQ86YT9 394 aa6□□□□□ -1.45
ECHDC1-223ENST00000534442 UBR7Q8N806 425 aa6□□□□□ -1.45
ECHDC1-223ENST00000534442 PIWIL2Q8TC59 973 aaKnown RBP6□□□□□ -1.45
ECHDC1-223ENST00000534442 ENOX1Q8TC92 643 aaKnown RBP6□□□□□ -1.45
ECHDC1-223ENST00000534442 RAET1EQ8TD07 263 aa6□□□□□ -1.45
ECHDC1-223ENST00000534442 SCLYQ96I15 445 aa6□□□□□ -1.45
ECHDC1-223ENST00000534442 DUSP15Q9H1R2 295 aaPredicted RBP6□□□□□ -1.45
ECHDC1-223ENST00000534442 CAAP1Q9H8G2 361 aa6□□□□□ -1.45
ECHDC1-223ENST00000534442 INTS7Q9NVH2 962 aaKnown RBP6□□□□□ -1.45
ECHDC1-223ENST00000534442 MAGEC2Q9UBF1 373 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms