RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 LSP1P33241 339 aa8.88□□□□□ -0.99
CASP4-213ENST00000534356 MLLT6P55198 1093 aaPredicted RBP8.88□□□□□ -0.99
CASP4-213ENST00000534356 EVA1CP58658 441 aa8.88□□□□□ -0.99
CASP4-213ENST00000534356 PHC1P78364 1004 aa8.88□□□□□ -0.99
CASP4-213ENST00000534356 CAP1Q01518 475 aa8.88□□□□□ -0.99
CASP4-213ENST00000534356 VMACQ2NL98 169 aa8.88□□□□□ -0.99
CASP4-213ENST00000534356 ZZZ3Q8IYH5 903 aa8.88□□□□□ -0.99
CASP4-213ENST00000534356 WRNIP1Q96S55 665 aa8.88□□□□□ -0.99
CASP4-213ENST00000534356 KCND1Q9NSA2 647 aa8.88□□□□□ -0.99
CASP4-213ENST00000534356 PHLDB1Q86UU1 1377 aa8.87□□□□□ -0.99
CASP4-213ENST00000534356 A0A1B0GTL3 188 aa8.87□□□□□ -0.99
CASP4-213ENST00000534356 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.87□□□□□ -0.99
CASP4-213ENST00000534356 UBA6A0AVT1 1052 aaPredicted RBP8.87□□□□□ -0.99
CASP4-213ENST00000534356 FBXO21O94952 628 aa8.87□□□□□ -0.99
CASP4-213ENST00000534356 COL6A1P12109 1028 aa8.87□□□□□ -0.99
CASP4-213ENST00000534356 CD40P25942 277 aa8.87□□□□□ -0.99
CASP4-213ENST00000534356 ECE1P42892 770 aa8.87□□□□□ -0.99
CASP4-213ENST00000534356 ALDH6A1Q02252 535 aaKnown RBP8.87□□□□□ -0.99
CASP4-213ENST00000534356 GPR158Q5T848 1215 aa8.87□□□□□ -0.99
CASP4-213ENST00000534356 RNF219Q5W0B1 726 aaPredicted RBP8.87□□□□□ -0.99
CASP4-213ENST00000534356 HDGFL2Q7Z4V5 671 aaPredicted RBP8.87□□□□□ -0.99
CASP4-213ENST00000534356 NME9Q86XW9 330 aa8.87□□□□□ -0.99
CASP4-213ENST00000534356 ZNF610Q8N9Z0 462 aa8.87□□□□□ -0.99
CASP4-213ENST00000534356 CLRN3Q8NCR9 226 aa8.87□□□□□ -0.99
CASP4-213ENST00000534356 SH3D21A4FU49 640 aa8.86□□□□□ -0.99
CASP4-213ENST00000534356 ULK1O75385 1050 aa8.86□□□□□ -0.99
CASP4-213ENST00000534356 PRLP01236 227 aa8.86□□□□□ -0.99
CASP4-213ENST00000534356 RPL13P26373 211 aaKnown RBP8.86□□□□□ -0.99
CASP4-213ENST00000534356 IL13P35225 146 aa8.86□□□□□ -0.99
CASP4-213ENST00000534356 IL13RA1P78552 427 aa8.86□□□□□ -0.99
CASP4-213ENST00000534356 SLC6A3Q01959 620 aa8.86□□□□□ -0.99
CASP4-213ENST00000534356 ADCY1Q08828 1119 aa8.86□□□□□ -0.99
CASP4-213ENST00000534356 TTC38Q5R3I4 469 aa8.86□□□□□ -0.99
CASP4-213ENST00000534356 CIAPIN1Q6FI81 312 aa8.86□□□□□ -0.99
CASP4-213ENST00000534356 TTLL7Q6ZT98 887 aa8.86□□□□□ -0.99
CASP4-213ENST00000534356 SPATS2Q86XZ4 545 aaKnown RBP8.86□□□□□ -0.99
CASP4-213ENST00000534356 COG1Q8WTW3 980 aa8.86□□□□□ -0.99
CASP4-213ENST00000534356 ZCCHC14Q8WYQ9 949 aaKnown RBP8.86□□□□□ -0.99
CASP4-213ENST00000534356 E2F7Q96AV8 911 aa8.86□□□□□ -0.99
CASP4-213ENST00000534356 ZNF496Q96IT1 587 aaPredicted RBP8.86□□□□□ -0.99
CASP4-213ENST00000534356 MAML3Q96JK9 1138 aa8.86□□□□□ -0.99
CASP4-213ENST00000534356 FOXB1Q99853 325 aa8.86□□□□□ -0.99
CASP4-213ENST00000534356 BTBD2Q9BX70 525 aa8.86□□□□□ -0.99
CASP4-213ENST00000534356 SEMA4AQ9H3S1 761 aa8.86□□□□□ -0.99
CASP4-213ENST00000534356 VTA1Q9NP79 307 aa8.86□□□□□ -0.99
CASP4-213ENST00000534356 hCG_2014768A0A024R1R8 64 aa8.85□□□□□ -0.99
CASP4-213ENST00000534356 DDX3XO00571 662 aaKnown RBP eCLIP8.85□□□□□ -0.99
CASP4-213ENST00000534356 CYP7B1O75881 506 aa8.85□□□□□ -0.99
CASP4-213ENST00000534356 ZNF28P17035 718 aa8.85□□□□□ -0.99
CASP4-213ENST00000534356 RGS3P49796 1198 aa8.85□□□□□ -0.99
CASP4-213ENST00000534356 IQSEC1Q6DN90 963 aa8.85□□□□□ -0.99
CASP4-213ENST00000534356 TP53I13Q8NBR0 393 aaPredicted RBP8.85□□□□□ -0.99
CASP4-213ENST00000534356 TUBGCP5Q96RT8 1024 aa8.85□□□□□ -0.99
CASP4-213ENST00000534356 NTMQ9P121 344 aa8.85□□□□□ -0.99
CASP4-213ENST00000534356 MSRAQ9UJ68 235 aa8.85□□□□□ -0.99
CASP4-213ENST00000534356 KNG1P01042 644 aa8.84□□□□□ -0.99
CASP4-213ENST00000534356 CFPP27918 469 aa8.84□□□□□ -0.99
CASP4-213ENST00000534356 SESN3P58005 492 aa8.84□□□□□ -0.99
CASP4-213ENST00000534356 STILQ15468 1287 aa8.84□□□□□ -0.99
CASP4-213ENST00000534356 TRMT10BQ6PF06 316 aaKnown RBP8.84□□□□□ -0.99
CASP4-213ENST00000534356 RASSF3Q86WH2 238 aa8.84□□□□□ -0.99
CASP4-213ENST00000534356 PHYKPLQ8IUZ5 450 aa8.84□□□□□ -0.99
CASP4-213ENST00000534356 TMEM151BQ8IW70 566 aa8.84□□□□□ -0.99
CASP4-213ENST00000534356 RPUSD2Q8IZ73 545 aaKnown RBP8.84□□□□□ -0.99
CASP4-213ENST00000534356 C7orf31Q8N865 590 aa8.84□□□□□ -0.99
CASP4-213ENST00000534356 LINC01356Q8N9X3 169 aa8.84□□□□□ -0.99
CASP4-213ENST00000534356 CALML6Q8TD86 181 aa8.84□□□□□ -0.99
CASP4-213ENST00000534356 ZDHHC5Q9C0B5 715 aa8.84□□□□□ -0.99
CASP4-213ENST00000534356 OR10A5Q9H207 317 aa8.84□□□□□ -0.99
CASP4-213ENST00000534356 POFUT1Q9H488 388 aa8.84□□□□□ -0.99
CASP4-213ENST00000534356 SLC5A4Q9NY91 659 aa8.84□□□□□ -0.99
CASP4-213ENST00000534356 NOC2LQ9Y3T9 749 aaKnown RBP8.84□□□□□ -0.99
CASP4-213ENST00000534356 RAB11FIP3O75154 756 aa8.83□□□□□ -1
CASP4-213ENST00000534356 PRKD3O94806 890 aa8.83□□□□□ -1
CASP4-213ENST00000534356 SARSP49591 514 aaKnown RBP8.83□□□□□ -1
CASP4-213ENST00000534356 ROM1Q03395 351 aa8.83□□□□□ -1
CASP4-213ENST00000534356 FAM50AQ14320 339 aaKnown RBP8.83□□□□□ -1
CASP4-213ENST00000534356 MYBPC3Q14896 1274 aa8.83□□□□□ -1
CASP4-213ENST00000534356 TCERG1LQ5VWI1 586 aa8.83□□□□□ -1
CASP4-213ENST00000534356 PRAMEF9Q5VWM5 478 aa8.83□□□□□ -1
CASP4-213ENST00000534356 KANK2Q63ZY3 851 aa8.83□□□□□ -1
CASP4-213ENST00000534356 SLFN12LQ6IEE8 588 aa8.83□□□□□ -1
CASP4-213ENST00000534356 DPP8Q6V1X1 898 aaPredicted RBP8.83□□□□□ -1
CASP4-213ENST00000534356 C1QL4Q86Z23 238 aa8.83□□□□□ -1
CASP4-213ENST00000534356 LRRC56Q8IYG6 542 aaPredicted RBP8.83□□□□□ -1
CASP4-213ENST00000534356 CARFQ8N187 725 aa8.83□□□□□ -1
CASP4-213ENST00000534356 TOX2Q96NM4 488 aa8.83□□□□□ -1
CASP4-213ENST00000534356 MYL10Q9BUA6 226 aa8.83□□□□□ -1
CASP4-213ENST00000534356 DBX1A6NMT0 343 aa8.82□□□□□ -1
CASP4-213ENST00000534356 ELL2O00472 640 aaPredicted RBP8.82□□□□□ -1
CASP4-213ENST00000534356 PRPF6O94906 941 aaKnown RBP8.82□□□□□ -1
CASP4-213ENST00000534356 CHGBP05060 677 aa8.82□□□□□ -1
CASP4-213ENST00000534356 ANAPC15P60006 121 aa8.82□□□□□ -1
CASP4-213ENST00000534356 IGBP1P78318 339 aa8.82□□□□□ -1
CASP4-213ENST00000534356 CD83Q01151 205 aa8.82□□□□□ -1
CASP4-213ENST00000534356 FRMD7Q6ZUT3 714 aa8.82□□□□□ -1
CASP4-213ENST00000534356 SPATA25Q9BR10 227 aa8.82□□□□□ -1
CASP4-213ENST00000534356 TRIM8Q9BZR9 551 aa8.82□□□□□ -1
CASP4-213ENST00000534356 TOPORSQ9NS56 1045 aaPredicted RBP8.82□□□□□ -1
CASP4-213ENST00000534356 USP36Q9P275 1121 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms