RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 BRMS1Q9HCU9 246 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 TMEM260Q9NX78 707 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 BTBD7Q9P203 1132 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 RBPJLQ9UBG7 517 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 CCPG1Q9ULG6 757 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 RIPK3Q9Y572 518 aa6.99□□□□□ -1.29
CMTM1-220ENST00000534143 RBBP6Q7Z6E9 1792 aaKnown RBP6.98□□□□□ -1.29
CMTM1-220ENST00000534143 ZNFX1Q9P2E3 1918 aaKnown RBP6.98□□□□□ -1.29
CMTM1-220ENST00000534143 PDHXO00330 501 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 HSPA8P11142 646 aaKnown RBP6.98□□□□□ -1.29
CMTM1-220ENST00000534143 ALAS1P13196 640 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 BRD2P25440 801 aaKnown RBP6.98□□□□□ -1.29
CMTM1-220ENST00000534143 MCM4P33991 863 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 STAT3P40763 770 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 TM4SF4P48230 202 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 CTCFP49711 727 aaPredicted RBP6.98□□□□□ -1.29
CMTM1-220ENST00000534143 HSD17B4P51659 736 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 LBX1P52954 281 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 INHBEP58166 350 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 UBE2SQ16763 222 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 TKFCQ3LXA3 575 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 FOXD4L6Q3SYB3 417 aaPredicted RBP6.98□□□□□ -1.29
CMTM1-220ENST00000534143 RILPL1Q5EBL4 403 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 MUM1L1Q5H9M0 696 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 JAKMIP3Q5VZ66 844 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 MCTP2Q6DN12 878 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 USP17L6PQ6QN14 398 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 FOXD4L3Q6VB84 417 aaPredicted RBP6.98□□□□□ -1.29
CMTM1-220ENST00000534143 CAPN12Q6ZSI9 719 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 C8orf86Q6ZUL3 223 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 KRT25Q7Z3Z0 450 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 RIOX2Q8IUF8 465 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 REXO1Q8N1G1 1221 aaKnown RBP6.98□□□□□ -1.29
CMTM1-220ENST00000534143 CUL5Q93034 780 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 CAPNS2Q96L46 248 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 ZNF396Q96N95 335 aaPredicted RBP6.98□□□□□ -1.29
CMTM1-220ENST00000534143 GBP4Q96PP9 640 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 SPOCK3Q9BQ16 436 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 MKNK1Q9BUB5 465 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 TEX13BQ9BXU2 312 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 MAF1Q9H063 256 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 IGFLR1Q9H665 355 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 ZCCHC17Q9NP64 241 aaKnown RBP6.98□□□□□ -1.29
CMTM1-220ENST00000534143 MAP3K20Q9NYL2 800 aaKnown RBP6.98□□□□□ -1.29
CMTM1-220ENST00000534143 RTEL1Q9NZ71 1219 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 BIN2Q9UBW5 565 aaPredicted RBP6.98□□□□□ -1.29
CMTM1-220ENST00000534143 RCOR1Q9UKL0 485 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 SLC6A14Q9UN76 642 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 CNPY2Q9Y2B0 182 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 RABGAP1Q9Y3P9 1069 aa6.98□□□□□ -1.29
CMTM1-220ENST00000534143 CTDP1Q9Y5B0 961 aaPredicted RBP6.98□□□□□ -1.29
CMTM1-220ENST00000534143 CCDC194A0A1B0GVG4 234 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 GCOM1H8Y6P7 765 aaPredicted RBP6.97□□□□□ -1.29
CMTM1-220ENST00000534143 IGF2BP3O00425 579 aaKnown RBP eCLIP6.97□□□□□ -1.29
CMTM1-220ENST00000534143 NFIBO00712 420 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 PEX10O60683 326 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 AOC2O75106 756 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 MAP3K6O95382 1288 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 FOSP01100 380 aaPredicted RBP6.97□□□□□ -1.29
CMTM1-220ENST00000534143 TPM2P07951 284 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 POLR2MP0CAP2 368 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 CYP2C8P10632 490 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 NCLP19338 710 aaKnown RBP6.97□□□□□ -1.29
CMTM1-220ENST00000534143 TARSP26639 723 aaKnown RBP6.97□□□□□ -1.29
CMTM1-220ENST00000534143 GCLCP48506 637 aaPredicted RBP6.97□□□□□ -1.29
CMTM1-220ENST00000534143 TRAPPC10P48553 1259 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 NASPP49321 788 aaPredicted RBP6.97□□□□□ -1.29
CMTM1-220ENST00000534143 KRT85P78386 507 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 TBC1D8BQ0IIM8 1120 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 AP3B2Q13367 1082 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 GNL2Q13823 731 aaKnown RBP6.97□□□□□ -1.29
CMTM1-220ENST00000534143 NONOQ15233 471 aaKnown RBP eCLIP6.97□□□□□ -1.29
CMTM1-220ENST00000534143 PTPAQ15257 358 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 ANO1Q5XXA6 986 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 SNRNP48Q6IEG0 339 aaKnown RBP6.97□□□□□ -1.29
CMTM1-220ENST00000534143 PIK3AP1Q6ZUJ8 805 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 ETFBKMTQ8IXQ9 262 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 TMEM87AQ8NBN3 555 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 LINC00301Q8NCQ3 95 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 CHST13Q8NET6 341 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 GTF3C2Q8WUA4 911 aaPredicted RBP6.97□□□□□ -1.29
CMTM1-220ENST00000534143 LEO1Q8WVC0 666 aaPredicted RBP6.97□□□□□ -1.29
CMTM1-220ENST00000534143 CRYGNQ8WXF5 182 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 MOV10L1Q9BXT6 1211 aaKnown RBP6.97□□□□□ -1.29
CMTM1-220ENST00000534143 FTOQ9C0B1 505 aaKnown RBP eCLIP6.97□□□□□ -1.29
CMTM1-220ENST00000534143 SPATC1LQ9H0A9 340 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 TXNRD2Q9NNW7 524 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 PRDM10Q9NQV6 1147 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 RNF146Q9NTX7 359 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 DNAJB12Q9NXW2 375 aaKnown RBP6.97□□□□□ -1.29
CMTM1-220ENST00000534143 ZFATQ9P243 1243 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 MORF4L1Q9UBU8 362 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 CFAP45Q9UL16 551 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 PCDHB6Q9Y5E3 794 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 CLIC4Q9Y696 253 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 MORC2Q9Y6X9 1032 aaPredicted RBP6.97□□□□□ -1.29
CMTM1-220ENST00000534143 LCTP09848 1927 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 ADGRA2Q96PE1 1338 aa6.97□□□□□ -1.29
CMTM1-220ENST00000534143 SPDYE3A6NKU9 549 aa6.96□□□□□ -1.3
CMTM1-220ENST00000534143 SASH3O75995 380 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms