RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 CYP3A7P24462 503 aa10.91□□□□□ -0.66
SSBP3-215ENST00000533946 KCNQ1P51787 676 aa10.91□□□□□ -0.66
SSBP3-215ENST00000533946 KIZQ2M2Z5 673 aa10.91□□□□□ -0.66
SSBP3-215ENST00000533946 LETM2Q2VYF4 491 aa10.91□□□□□ -0.66
SSBP3-215ENST00000533946 PIK3AP1Q6ZUJ8 805 aa10.91□□□□□ -0.66
SSBP3-215ENST00000533946 RPAINQ86UA6 219 aa10.91□□□□□ -0.66
SSBP3-215ENST00000533946 DAGLBQ8NCG7 672 aa10.91□□□□□ -0.66
SSBP3-215ENST00000533946 BANK1Q8NDB2 785 aa10.91□□□□□ -0.66
SSBP3-215ENST00000533946 SEPT8Q92599 483 aa10.91□□□□□ -0.66
SSBP3-215ENST00000533946 HAS1Q92839 578 aa10.91□□□□□ -0.66
SSBP3-215ENST00000533946 TOP1MTQ969P6 601 aa10.91□□□□□ -0.66
SSBP3-215ENST00000533946 GAS2L1Q99501 681 aaPredicted RBP10.91□□□□□ -0.66
SSBP3-215ENST00000533946 RAD9AQ99638 391 aa10.91□□□□□ -0.66
SSBP3-215ENST00000533946 AZI2Q9H6S1 392 aa10.91□□□□□ -0.66
SSBP3-215ENST00000533946 DISC1Q9NRI5 854 aa10.91□□□□□ -0.66
SSBP3-215ENST00000533946 VAV3Q9UKW4 847 aa10.91□□□□□ -0.66
SSBP3-215ENST00000533946 PADI3Q9ULW8 664 aa10.91□□□□□ -0.66
SSBP3-215ENST00000533946 IGSF9BQ9UPX0 1349 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 BTBD18B2RXH4 712 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 GPR32O75388 356 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 CENPBP07199 599 aaPredicted RBP10.9□□□□□ -0.66
SSBP3-215ENST00000533946 USP11P51784 963 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 ANAPC15P60006 121 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 ERVK-21P61565 698 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 PRKCEQ02156 737 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 Q4G0T1 1027 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 LRCH2Q5VUJ6 765 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 PLA2G4FQ68DD2 849 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 ZNF746Q6NUN9 644 aaPredicted RBP10.9□□□□□ -0.66
SSBP3-215ENST00000533946 MIS18BP1Q6P0N0 1132 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 POTEDQ86YR6 584 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 KSR1Q8IVT5 923 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 CCDC83Q8IWF9 413 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 TRIM22Q8IYM9 498 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 LINC01465Q8N7H1 131 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 CCDC148Q8NFR7 591 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 SP7Q8TDD2 431 aaPredicted RBP10.9□□□□□ -0.66
SSBP3-215ENST00000533946 CCDC12Q8WUD4 166 aaPredicted RBP10.9□□□□□ -0.66
SSBP3-215ENST00000533946 OSMRQ99650 979 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 CELF4Q9BZC1 486 aaKnown RBP10.9□□□□□ -0.66
SSBP3-215ENST00000533946 GLT8D2Q9H1C3 349 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 RC3H2Q9HBD1 1191 aaKnown RBP10.9□□□□□ -0.66
SSBP3-215ENST00000533946 SAMM50Q9Y512 469 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 PCDHGC5Q9Y5F6 944 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 PCDHA10Q9Y5I2 948 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 TRPV2Q9Y5S1 764 aa10.9□□□□□ -0.66
SSBP3-215ENST00000533946 RRN3P2A6NIE6 340 aa10.89□□□□□ -0.67
SSBP3-215ENST00000533946 HBP1O60381 514 aa10.89□□□□□ -0.67
SSBP3-215ENST00000533946 GAS7O60861 476 aa10.89□□□□□ -0.67
SSBP3-215ENST00000533946 AMHP03971 560 aa10.89□□□□□ -0.67
SSBP3-215ENST00000533946 NPEPPSP55786 919 aa10.89□□□□□ -0.67
SSBP3-215ENST00000533946 PAN2Q504Q3 1202 aaKnown RBP10.89□□□□□ -0.67
SSBP3-215ENST00000533946 TAF2Q6P1X5 1199 aa10.89□□□□□ -0.67
SSBP3-215ENST00000533946 FAM228AQ86W67 206 aa10.89□□□□□ -0.67
SSBP3-215ENST00000533946 CKAP2LQ8IYA6 745 aa10.89□□□□□ -0.67
SSBP3-215ENST00000533946 METTL13Q8N6R0 699 aa10.89□□□□□ -0.67
SSBP3-215ENST00000533946 BICD2Q8TD16 824 aa10.89□□□□□ -0.67
SSBP3-215ENST00000533946 ADAMTS10Q9H324 1103 aa10.89□□□□□ -0.67
SSBP3-215ENST00000533946 ERVK-5Q9HDB9 667 aa10.89□□□□□ -0.67
SSBP3-215ENST00000533946 BMP2KQ9NSY1 1161 aaPredicted RBP10.89□□□□□ -0.67
SSBP3-215ENST00000533946 TBC1D22BQ9NU19 505 aa10.89□□□□□ -0.67
SSBP3-215ENST00000533946 RGL1Q9NZL6 768 aa10.89□□□□□ -0.67
SSBP3-215ENST00000533946 STK36Q9NRP7 1315 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 SMIM35A0A1B0GVV1 85 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 KIF28PB7ZC32 967 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 CAND2O75155 1236 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 PARNO95453 639 aaKnown RBP10.88□□□□□ -0.67
SSBP3-215ENST00000533946 OATP04181 439 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 PSAPP07602 524 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 DNAJB1P25685 340 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 GTF2F1P35269 517 aaKnown RBP eCLIP10.88□□□□□ -0.672e-6■■■■□ 19.8
SSBP3-215ENST00000533946 SETQ01105 290 aaPredicted RBP10.88□□□□□ -0.67
SSBP3-215ENST00000533946 KRT76Q01546 638 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 SPIRE1Q08AE8 756 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 NFX1Q12986 1120 aaKnown RBP10.88□□□□□ -0.67
SSBP3-215ENST00000533946 CAMK1Q14012 370 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 NBR1Q14596 966 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 NONOQ15233 471 aaKnown RBP eCLIP10.88□□□□□ -0.671e-6■■■□□ 17.3
SSBP3-215ENST00000533946 TARBP2Q15633 366 aaKnown RBP10.88□□□□□ -0.67
SSBP3-215ENST00000533946 MTERF2Q49AM1 385 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 FNDC1Q4ZHG4 1894 aaPredicted RBP10.88□□□□□ -0.67
SSBP3-215ENST00000533946 EPC2Q52LR7 807 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 FAM102BQ5T8I3 360 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 FAM160B1Q5W0V3 765 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 EFCAB12Q6NXP0 572 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 TSHZ1Q6ZSZ6 1077 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 ANO5Q75V66 913 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 TEKT3Q9BXF9 490 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 TMEM60Q9H2L4 133 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 KCNMB3Q9NPA1 279 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 RNF19AQ9NV58 838 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 DDX25Q9UHL0 483 aaKnown RBP10.88□□□□□ -0.67
SSBP3-215ENST00000533946 ST3GAL5Q9UNP4 418 aa10.88□□□□□ -0.67
SSBP3-215ENST00000533946 PLXNA4Q9HCM2 1894 aa10.87□□□□□ -0.67
SSBP3-215ENST00000533946 WDR64B1ANS9 1081 aa10.87□□□□□ -0.67
SSBP3-215ENST00000533946 GRM6O15303 877 aa10.87□□□□□ -0.67
SSBP3-215ENST00000533946 CCNT1O60563 726 aaKnown RBP10.87□□□□□ -0.67
SSBP3-215ENST00000533946 ATP2B1P20020 1258 aa10.87□□□□□ -0.67
SSBP3-215ENST00000533946 POU3F3P20264 500 aaPredicted RBP10.87□□□□□ -0.67
SSBP3-215ENST00000533946 NLRP11P59045 1033 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms