RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 PLA2G4DQ86XP0 818 aa20.55■□□□□ 0.88
UBXN1-216ENST00000533908 TEX2Q8IWB9 1127 aa20.55■□□□□ 0.88
UBXN1-216ENST00000533908 ATP8B4Q8TF62 1192 aa20.55■□□□□ 0.88
UBXN1-216ENST00000533908 POF1BQ8WVV4 589 aa20.55■□□□□ 0.88
UBXN1-216ENST00000533908 GINS2Q9Y248 185 aa20.55■□□□□ 0.88
UBXN1-216ENST00000533908 KLF18A0A0U1RQI7 1052 aa20.54■□□□□ 0.88
UBXN1-216ENST00000533908 GOLGA8AA7E2F4 631 aa20.54■□□□□ 0.88
UBXN1-216ENST00000533908 GOLGA8BA8MQT2 603 aa20.54■□□□□ 0.88
UBXN1-216ENST00000533908 BACH1O14867 736 aa20.54■□□□□ 0.88
UBXN1-216ENST00000533908 HBP1O60381 514 aa20.54■□□□□ 0.88
UBXN1-216ENST00000533908 PPFIA3O75145 1194 aa20.54■□□□□ 0.88
UBXN1-216ENST00000533908 CPA1P15085 419 aa20.54■□□□□ 0.88
UBXN1-216ENST00000533908 ZNF76P36508 570 aa20.54■□□□□ 0.88
UBXN1-216ENST00000533908 SARSP49591 514 aaKnown RBP20.54■□□□□ 0.88
UBXN1-216ENST00000533908 AP3B2Q13367 1082 aa20.54■□□□□ 0.88
UBXN1-216ENST00000533908 SMAD4Q13485 552 aaKnown RBP20.54■□□□□ 0.88
UBXN1-216ENST00000533908 BMP2KLQ5H9B9 411 aa20.54■□□□□ 0.88
UBXN1-216ENST00000533908 FAM102BQ5T8I3 360 aa20.54■□□□□ 0.88
UBXN1-216ENST00000533908 RNF20Q5VTR2 975 aa20.54■□□□□ 0.88
UBXN1-216ENST00000533908 HCSTQ9UBK5 93 aa20.54■□□□□ 0.88
UBXN1-216ENST00000533908 CD207Q9UJ71 328 aa20.54■□□□□ 0.88
UBXN1-216ENST00000533908 CYP3A4P08684 503 aa20.53■□□□□ 0.88
UBXN1-216ENST00000533908 RBM23Q86U06 439 aaKnown RBP20.53■□□□□ 0.88
UBXN1-216ENST00000533908 ADAM2Q99965 735 aa20.53■□□□□ 0.88
UBXN1-216ENST00000533908 ZNF302Q9NR11 478 aa20.53■□□□□ 0.88
UBXN1-216ENST00000533908 MUTYHQ9UIF7 546 aa20.53■□□□□ 0.88
UBXN1-216ENST00000533908 ST3GAL5Q9UNP4 418 aa20.53■□□□□ 0.88
UBXN1-216ENST00000533908 PLXNA4Q9HCM2 1894 aa20.52■□□□□ 0.88
UBXN1-216ENST00000533908 C9IYK1 514 aa20.52■□□□□ 0.88
UBXN1-216ENST00000533908 hCG_1984214I3L0E3 225 aa20.52■□□□□ 0.88
UBXN1-216ENST00000533908 IPO5O00410 1097 aaKnown RBP20.52■□□□□ 0.88
UBXN1-216ENST00000533908 RPS6KA5O75582 802 aa20.52■□□□□ 0.88
UBXN1-216ENST00000533908 EYA4O95677 639 aa20.52■□□□□ 0.88
UBXN1-216ENST00000533908 GLP2RO95838 553 aa20.52■□□□□ 0.88
UBXN1-216ENST00000533908 NRIP1P48552 1158 aa20.52■□□□□ 0.88
UBXN1-216ENST00000533908 PFKFB3Q16875 520 aaPredicted RBP20.52■□□□□ 0.88
UBXN1-216ENST00000533908 FAM160B1Q5W0V3 765 aa20.52■□□□□ 0.88
UBXN1-216ENST00000533908 PDXDC2PQ6P474 469 aa20.52■□□□□ 0.88
UBXN1-216ENST00000533908 RNF135Q8IUD6 432 aa20.52■□□□□ 0.88
UBXN1-216ENST00000533908 EFHBQ8N7U6 833 aa20.52■□□□□ 0.88
UBXN1-216ENST00000533908 ZNF713Q8N859 430 aaPredicted RBP20.52■□□□□ 0.88
UBXN1-216ENST00000533908 PPP1R16BQ96T49 567 aa20.52■□□□□ 0.88
UBXN1-216ENST00000533908 RGS18Q9NS28 235 aa20.52■□□□□ 0.88
UBXN1-216ENST00000533908 LRFN2Q9ULH4 789 aa20.52■□□□□ 0.88
UBXN1-216ENST00000533908 PCDHB7Q9Y5E2 793 aa20.52■□□□□ 0.88
UBXN1-216ENST00000533908 EVPLQ92817 2033 aa20.52■□□□□ 0.88
UBXN1-216ENST00000533908 C22orf31O95567 290 aa20.51■□□□□ 0.87
UBXN1-216ENST00000533908 NDUFV1P49821 464 aa20.51■□□□□ 0.87
UBXN1-216ENST00000533908 RBM10P98175 930 aaKnown RBP20.51■□□□□ 0.87
UBXN1-216ENST00000533908 PKN1Q16512 942 aa20.51■□□□□ 0.87
UBXN1-216ENST00000533908 CSPP1Q1MSJ5 1256 aa20.51■□□□□ 0.87
UBXN1-216ENST00000533908 KIZQ2M2Z5 673 aa20.51■□□□□ 0.87
UBXN1-216ENST00000533908 ZNF484Q5JVG2 852 aa20.51■□□□□ 0.87
UBXN1-216ENST00000533908 MIS18BP1Q6P0N0 1132 aa20.51■□□□□ 0.87
UBXN1-216ENST00000533908 TRMT1LQ7Z2T5 733 aaKnown RBP20.51■□□□□ 0.87
UBXN1-216ENST00000533908 UPF3BQ9BZI7 483 aaKnown RBP20.51■□□□□ 0.87
UBXN1-216ENST00000533908 MAFBQ9Y5Q3 323 aaPredicted RBP20.51■□□□□ 0.87
UBXN1-216ENST00000533908 COL1A2P08123 1366 aa20.5■□□□□ 0.87
UBXN1-216ENST00000533908 FNDC1Q4ZHG4 1894 aaPredicted RBP20.5■□□□□ 0.87
UBXN1-216ENST00000533908 EDIL3O43854 480 aa20.5■□□□□ 0.87
UBXN1-216ENST00000533908 GPR32O75388 356 aa20.5■□□□□ 0.87
UBXN1-216ENST00000533908 FAM189BP81408 668 aa20.5■□□□□ 0.87
UBXN1-216ENST00000533908 APOBRQ0VD83 1088 aa20.5■□□□□ 0.87
UBXN1-216ENST00000533908 HERC4Q5GLZ8 1057 aaPredicted RBP20.5■□□□□ 0.87
UBXN1-216ENST00000533908 HFE2Q6ZVN8 426 aa20.5■□□□□ 0.87
UBXN1-216ENST00000533908 SLC24A5Q71RS6 500 aa20.5■□□□□ 0.87
UBXN1-216ENST00000533908 FAM228AQ86W67 206 aa20.5■□□□□ 0.87
UBXN1-216ENST00000533908 GLT8D2Q9H1C3 349 aa20.5■□□□□ 0.87
UBXN1-216ENST00000533908 BARX2Q9UMQ3 279 aaPredicted RBP20.5■□□□□ 0.87
UBXN1-216ENST00000533908 TRIOO75962 3097 aa20.5■□□□□ 0.87
UBXN1-216ENST00000533908 TBKBP1A7MCY6 615 aa20.49■□□□□ 0.87
UBXN1-216ENST00000533908 PER2O15055 1255 aa20.49■□□□□ 0.87
UBXN1-216ENST00000533908 VTNP04004 478 aa20.49■□□□□ 0.87
UBXN1-216ENST00000533908 CRYBB1P53674 252 aaPredicted RBP20.49■□□□□ 0.87
UBXN1-216ENST00000533908 ERVFC1P60507 584 aa20.49■□□□□ 0.87
UBXN1-216ENST00000533908 COASYQ13057 564 aa20.49■□□□□ 0.87
UBXN1-216ENST00000533908 DSC3Q14574 896 aa20.49■□□□□ 0.87
UBXN1-216ENST00000533908 ALYREFQ86V81 257 aaKnown RBP20.49■□□□□ 0.87
UBXN1-216ENST00000533908 SMRP1Q8NCR6 262 aa20.49■□□□□ 0.87
UBXN1-216ENST00000533908 VN1R2Q8NFZ6 395 aa20.49■□□□□ 0.87
UBXN1-216ENST00000533908 OSMRQ99650 979 aa20.49■□□□□ 0.87
UBXN1-216ENST00000533908 ZNF577Q9BSK1 485 aa20.49■□□□□ 0.87
UBXN1-216ENST00000533908 ZMYND12Q9H0C1 365 aa20.49■□□□□ 0.87
UBXN1-216ENST00000533908 TYW1Q9NV66 732 aaKnown RBP20.49■□□□□ 0.87
UBXN1-216ENST00000533908 NAP1L2Q9ULW6 460 aaPredicted RBP20.49■□□□□ 0.87
UBXN1-216ENST00000533908 ESYT2A0FGR8 921 aa20.48■□□□□ 0.87
UBXN1-216ENST00000533908 DENND3A2RUS2 1198 aa20.48■□□□□ 0.87
UBXN1-216ENST00000533908 GPR182O15218 404 aa20.48■□□□□ 0.87
UBXN1-216ENST00000533908 FGFR1P11362 822 aa20.48■□□□□ 0.87
UBXN1-216ENST00000533908 RCAN1P53805 252 aa20.48■□□□□ 0.87
UBXN1-216ENST00000533908 BBXQ8WY36 941 aaPredicted RBP20.48■□□□□ 0.87
UBXN1-216ENST00000533908 FBXL18Q96ME1 805 aa20.48■□□□□ 0.87
UBXN1-216ENST00000533908 CWH43Q9H720 699 aa20.48■□□□□ 0.87
UBXN1-216ENST00000533908 TLE6Q9H808 572 aa20.48■□□□□ 0.87
UBXN1-216ENST00000533908 C1orf112Q9NSG2 853 aa20.48■□□□□ 0.87
UBXN1-216ENST00000533908 FGF18O76093 207 aa20.47■□□□□ 0.87
UBXN1-216ENST00000533908 METAP2P50579 478 aaKnown RBP eCLIP20.47■□□□□ 0.87
UBXN1-216ENST00000533908 ZNF746Q6NUN9 644 aaPredicted RBP20.47■□□□□ 0.87
UBXN1-216ENST00000533908 LRRC55Q6ZSA7 311 aa20.47■□□□□ 0.87
UBXN1-216ENST00000533908 Q6ZUG5 572 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms