RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 CLMNQ96JQ2 1002 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 MAF1Q9H063 256 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 CRISPLD2Q9H0B8 497 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 KCNH6Q9H252 994 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 NDST4Q9H3R1 872 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 KCND2Q9NZV8 630 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 KIAA1024Q9UPX6 916 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 DNM3Q9UQ16 869 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 SIK3Q9Y2K2 1263 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 PCDHA2Q9Y5H9 948 aa10.68□□□□□ -0.7
CHKA-207ENST00000533728 COL11A1P12107 1806 aaPredicted RBP10.68□□□□□ -0.7
CHKA-207ENST00000533728 UBE4BO95155 1302 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 MYPNQ86TC9 1320 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 RLFQ13129 1914 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 KIAA1217Q5T5P2 1943 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 IGLV3-22A0A075B6J6 115 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 PRR33A8MZF0 331 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 B4DLN1 442 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 EIF3CLB5ME19 914 aaKnown RBP10.67□□□□□ -0.7
CHKA-207ENST00000533728 TCP10L2B9ZVM9 353 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 GCOM1H8Y6P7 765 aaPredicted RBP10.67□□□□□ -0.7
CHKA-207ENST00000533728 ATP8B1O43520 1251 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 EYA4O95677 639 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 TUBBP07437 444 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 POLR2MP0CAP2 368 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 IDEP14735 1019 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 H2AFXP16104 143 aaPredicted RBP10.67□□□□□ -0.7
CHKA-207ENST00000533728 GAP43P17677 238 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 TRIM21P19474 475 aaKnown RBP10.67□□□□□ -0.7
CHKA-207ENST00000533728 HOXD10P28358 340 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 IKQ13123 557 aaPredicted RBP10.67□□□□□ -0.7
CHKA-207ENST00000533728 PPP2R5CQ13362 524 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 COL9A2Q14055 689 aaPredicted RBP10.67□□□□□ -0.7
CHKA-207ENST00000533728 MTF1Q14872 753 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 GRIN2CQ14957 1233 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 NFIL3Q16649 462 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 SHROOM1Q2M3G4 852 aaPredicted RBP10.67□□□□□ -0.7
CHKA-207ENST00000533728 GLIPR1L2Q4G1C9 344 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 PRR16Q569H4 304 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 DYMQ7RTS9 669 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 GPBP1Q86WP2 473 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 CEP112Q8N8E3 955 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 NEK9Q8TD19 979 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 TSC1Q92574 1164 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 UBXN4Q92575 508 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 SYN2Q92777 582 aaPredicted RBP10.67□□□□□ -0.7
CHKA-207ENST00000533728 SLC5A5Q92911 643 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 WDR24Q96S15 920 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 EIF3CQ99613 913 aaKnown RBP10.67□□□□□ -0.7
CHKA-207ENST00000533728 WDR11Q9BZH6 1224 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 CDC23Q9UJX2 597 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 VAV3Q9UKW4 847 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 FZD1Q9UP38 647 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 PLAGL2Q9UPG8 496 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 COL4A3BPQ9Y5P4 624 aa10.67□□□□□ -0.7
CHKA-207ENST00000533728 CACNA1HO95180 2353 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 POTEB3A0JP26 581 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 CTAGE9A4FU28 777 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 FAM86B1E9PN63 330 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 RNF225M0QZC1 329 aaPredicted RBP10.66□□□□□ -0.7
CHKA-207ENST00000533728 WDR46O15213 610 aaKnown RBP10.66□□□□□ -0.7
CHKA-207ENST00000533728 FANCGO15287 622 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 MSH4O15457 936 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 MED24O75448 989 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 IPO7O95373 1038 aaKnown RBP10.66□□□□□ -0.7
CHKA-207ENST00000533728 LCA5LO95447 670 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 FAM86B2P0C5J1 330 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 SPATA31C1P0DKV0 1188 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 SLURP2P0DP57 97 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 BCRP11274 1271 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 OSBPP22059 807 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 ARHGAP25P42331 645 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 RASA3Q14644 834 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 WHAMMP3Q1A5X7 153 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 WDR59Q6PJI9 974 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 POTEBQ6S5H4 581 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 POTEEQ6S8J3 1075 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 RSRC2Q7L4I2 434 aaKnown RBP10.66□□□□□ -0.7
CHKA-207ENST00000533728 CATSPER3Q86XQ3 398 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 GPR161Q8N6U8 529 aaKnown RBP10.66□□□□□ -0.7
CHKA-207ENST00000533728 SLAIN1Q8ND83 568 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 RABGGTAQ92696 567 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 LBHD1Q9BQE6 289 aaPredicted RBP10.66□□□□□ -0.7
CHKA-207ENST00000533728 DESI2Q9BSY9 194 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 TSGA10Q9BZW7 698 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 KCTD10Q9H3F6 313 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 OLFML3Q9NRN5 406 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 ARGLU1Q9NWB6 273 aaPredicted RBP10.66□□□□□ -0.7
CHKA-207ENST00000533728 SEL1LQ9UBV2 794 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 TRAF3IP3Q9Y228 551 aa10.66□□□□□ -0.7
CHKA-207ENST00000533728 ARID2Q68CP9 1835 aa10.65□□□□□ -0.7
CHKA-207ENST00000533728 MAP1BP46821 2468 aaKnown RBP10.65□□□□□ -0.7
CHKA-207ENST00000533728 ATP8B3O60423 1300 aa10.65□□□□□ -0.7
CHKA-207ENST00000533728 SSU72P8A0A1W2PR75 194 aa10.65□□□□□ -0.7
CHKA-207ENST00000533728 CLRN2A0PK11 232 aa10.65□□□□□ -0.7
CHKA-207ENST00000533728 E9PMD0 336 aa10.65□□□□□ -0.7
CHKA-207ENST00000533728 PDXKO00764 312 aa10.65□□□□□ -0.7
CHKA-207ENST00000533728 EIF3DO15371 548 aaKnown RBP eCLIP10.65□□□□□ -0.7
CHKA-207ENST00000533728 KRT86O43790 486 aa10.65□□□□□ -0.7
CHKA-207ENST00000533728 RAD21O60216 631 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms