RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 MXD4Q14582 209 aaPredicted RBP12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 UBLCP1Q8WVY7 318 aaPredicted RBP12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 ZNF560Q96MR9 790 aa12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 TUBGCP2Q9BSJ2 902 aa12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 CPSF3Q9UKF6 684 aaKnown RBP12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 DYNC1LI2O43237 492 aaPredicted RBP12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 RFC5P40937 340 aa12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 BRD3Q15059 726 aa12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 MRPL47Q9HD33 250 aaKnown RBP12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 NKIRAS1Q9NYS0 192 aa12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 BACE1P56817 501 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 POLR2FP61218 127 aaKnown RBP12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 SPDYE2Q495Y8 402 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 C8orf74Q6P047 294 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 FAM149B1Q96BN6 582 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 THAP9Q9H5L6 903 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 RABEP2Q9H5N1 569 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 RWDD2AQ9UIY3 292 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 PCDHB6Q9Y5E3 794 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 F8W8V4 182 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 GIPC1O14908 333 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 GBP1P32455 592 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 COPB1P53618 953 aaKnown RBP12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 ARPP19P56211 112 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 AP1ARQ63HQ0 302 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 TYW1BQ6NUM6 668 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 RUFY4Q6ZNE9 571 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 PROM2Q8N271 834 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 AFAP1L2Q8N4X5 818 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 PCSK9Q8NBP7 692 aaKnown RBP12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 CCDC110Q8TBZ0 833 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 TRIM62Q9BVG3 475 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 TMEM63CQ9P1W3 806 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 IKBKBO14920 756 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 FKBP1BP68106 108 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 RESTQ13127 1097 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 TRIM58Q8NG06 486 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 DYDC2Q96IM9 177 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 PRMT6Q96LA8 375 aaPredicted RBP12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 ADGRB2O60241 1585 aa12.19□□□□□ -0.46
AMBRA1-211ENST00000533727 GADD45BO75293 160 aaPredicted RBP12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 DGAT1O75907 488 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 DDIT3P35638 169 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 ITIH3Q06033 890 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 DGKDQ16760 1214 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 XXYLT1Q8NBI6 393 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 CCT6BQ92526 530 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 DPYSL4O14531 572 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 DDNO94850 711 aaPredicted RBP12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 PDIA5Q14554 519 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 CFAP221Q4G0U5 840 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 CEP85LQ5SZL2 805 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 RPGRIP1Q96KN7 1286 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 KCND2Q9NZV8 630 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 NXF1Q9UBU9 619 aaKnown RBP12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 ASIC3Q9UHC3 531 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 BAIAP2L1Q9UHR4 511 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 TFRCP02786 760 aaKnown RBP12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 SKIP12755 728 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 PRPSAP1Q14558 356 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 ZNF449Q6P9G9 518 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 REM2Q8IYK8 340 aaPredicted RBP12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 RSAD2Q8WXG1 361 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 GPRASP2Q96D09 838 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 RUNDC3BQ96NL0 473 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 MRIQ9BWK5 157 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 IPO11Q9UI26 975 aaKnown RBP12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 INPP5FQ9Y2H2 1132 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 NKRFO15226 690 aaKnown RBP eCLIP12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 GAS2O43903 313 aaKnown RBP12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 CEP104O60308 925 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 VEPH1Q14D04 833 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 ERCC6LQ2NKX8 1250 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 ARL13BQ3SXY8 428 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 C15orf52Q6ZUT6 534 aaKnown RBP12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 RHPN2Q8IUC4 686 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 THNSL1Q8IYQ7 743 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 RAD54LQ92698 747 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 RIT2Q99578 217 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 CAPN7Q9Y6W3 813 aa12.18□□□□□ -0.46
AMBRA1-211ENST00000533727 MYO1FO00160 1098 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 DDR1Q08345 913 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 TOB2Q14106 344 aaPredicted RBP12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 C1orf228Q6PIY5 440 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 RPAINQ86UA6 219 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 CCDC25Q86WR0 208 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 LXNQ9BS40 222 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 POLR3FQ9H1D9 316 aaPredicted RBP12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 PXDNQ92626 1479 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 ESYT2A0FGR8 921 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 DCDC2CA8MYV0 355 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 FGFR2P21802 821 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 PPP1R21Q6ZMI0 780 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 IFT20Q8IY31 132 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 ZC3H15Q8WU90 426 aaKnown RBP12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 ICAM1P05362 532 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 SRGAP2BP0DMP2 458 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 PDHBP11177 359 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 GPC3P51654 580 aa12.17□□□□□ -0.46
AMBRA1-211ENST00000533727 WHAMMP3Q1A5X7 153 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms