RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 UIMC1Q96RL1 719 aa26.51■■□□□ 1.83
SMPD1-209ENST00000533196 C17orf80Q9BSJ5 609 aa26.51■■□□□ 1.83
SMPD1-209ENST00000533196 TEKT3Q9BXF9 490 aa26.51■■□□□ 1.83
SMPD1-209ENST00000533196 DISC1Q9NRI5 854 aa26.51■■□□□ 1.83
SMPD1-209ENST00000533196 GABBR1Q9UBS5 961 aa26.51■■□□□ 1.83
SMPD1-209ENST00000533196 TPCN1Q9ULQ1 816 aa26.51■■□□□ 1.83
SMPD1-209ENST00000533196 VCANP13611 3396 aa26.5■■□□□ 1.83
SMPD1-209ENST00000533196 ZBTB42B2RXF5 422 aa26.5■■□□□ 1.83
SMPD1-209ENST00000533196 CD52P31358 61 aa26.5■■□□□ 1.83
SMPD1-209ENST00000533196 TMEM62Q0P6H9 643 aa26.5■■□□□ 1.83
SMPD1-209ENST00000533196 PAK2Q13177 524 aa26.5■■□□□ 1.83
SMPD1-209ENST00000533196 NONOQ15233 471 aaKnown RBP eCLIP26.5■■□□□ 1.83
SMPD1-209ENST00000533196 ODR4Q5SWX8 454 aa26.5■■□□□ 1.83
SMPD1-209ENST00000533196 LRCH2Q5VUJ6 765 aa26.5■■□□□ 1.83
SMPD1-209ENST00000533196 KRT40Q6A162 431 aa26.5■■□□□ 1.83
SMPD1-209ENST00000533196 KIAA0319LQ8IZA0 1049 aa26.5■■□□□ 1.83
SMPD1-209ENST00000533196 MBOAT7Q96N66 472 aa26.5■■□□□ 1.83
SMPD1-209ENST00000533196 PADI3Q9ULW8 664 aa26.5■■□□□ 1.83
SMPD1-209ENST00000533196 BRWD1Q9NSI6 2320 aa26.49■■□□□ 1.83
SMPD1-209ENST00000533196 RBAK-RBAKDNI3L0D1 243 aa26.49■■□□□ 1.83
SMPD1-209ENST00000533196 MAGEB2O15479 319 aa26.49■■□□□ 1.83
SMPD1-209ENST00000533196 C22orf31O95567 290 aa26.49■■□□□ 1.83
SMPD1-209ENST00000533196 EPC2Q52LR7 807 aa26.49■■□□□ 1.83
SMPD1-209ENST00000533196 ZNF710Q8N1W2 664 aa26.49■■□□□ 1.83
SMPD1-209ENST00000533196 AIFM3Q96NN9 605 aa26.49■■□□□ 1.83
SMPD1-209ENST00000533196 PHF20Q9BVI0 1012 aa26.49■■□□□ 1.83
SMPD1-209ENST00000533196 NRBP2Q9NSY0 501 aa26.49■■□□□ 1.83
SMPD1-209ENST00000533196 RWDD3Q9Y3V2 267 aa26.49■■□□□ 1.83
SMPD1-209ENST00000533196 TMEM192Q8IY95 271 aa26.48■■□□□ 1.83
SMPD1-209ENST00000533196 FIBCD1Q8N539 461 aa26.48■■□□□ 1.83
SMPD1-209ENST00000533196 IL27Q8NEV9 243 aa26.48■■□□□ 1.83
SMPD1-209ENST00000533196 WASF1Q92558 559 aa26.48■■□□□ 1.83
SMPD1-209ENST00000533196 RC3H2Q9HBD1 1191 aaKnown RBP26.48■■□□□ 1.83
SMPD1-209ENST00000533196 ADGRA3Q8IWK6 1321 aa26.47■■□□□ 1.83
SMPD1-209ENST00000533196 PSMD10O75832 226 aa26.47■■□□□ 1.83
SMPD1-209ENST00000533196 AK2P54819 239 aa26.47■■□□□ 1.83
SMPD1-209ENST00000533196 PTPROQ16827 1216 aa26.47■■□□□ 1.83
SMPD1-209ENST00000533196 H3BNC9 293 aa26.46■■□□□ 1.83
SMPD1-209ENST00000533196 OATP04181 439 aa26.46■■□□□ 1.83
SMPD1-209ENST00000533196 LINC01599Q8WXQ3 324 aa26.46■■□□□ 1.83
SMPD1-209ENST00000533196 ZNF689Q96CS4 500 aaPredicted RBP26.46■■□□□ 1.83
SMPD1-209ENST00000533196 RNF216Q9NWF9 866 aaPredicted RBP26.46■■□□□ 1.83
SMPD1-209ENST00000533196 CCDC194A0A1B0GVG4 234 aa26.45■■□□□ 1.82
SMPD1-209ENST00000533196 RPS6KA5O75582 802 aa26.45■■□□□ 1.82
SMPD1-209ENST00000533196 DGKIO75912 1065 aa26.45■■□□□ 1.82
SMPD1-209ENST00000533196 TDP2O95551 362 aa26.45■■□□□ 1.82
SMPD1-209ENST00000533196 RB1P06400 928 aa26.45■■□□□ 1.82
SMPD1-209ENST00000533196 STAG3L1P0CL83 205 aa26.45■■□□□ 1.82
SMPD1-209ENST00000533196 TMOD1P28289 359 aa26.45■■□□□ 1.82
SMPD1-209ENST00000533196 RTN4RL1Q86UN2 441 aaPredicted RBP26.45■■□□□ 1.82
SMPD1-209ENST00000533196 NPAS4Q8IUM7 802 aa26.45■■□□□ 1.82
SMPD1-209ENST00000533196 CRIPAKQ8N1N5 446 aa26.45■■□□□ 1.82
SMPD1-209ENST00000533196 HLA-CQ95604 372 aa26.45■■□□□ 1.82
SMPD1-209ENST00000533196 MRPL38Q96DV4 380 aaKnown RBP26.45■■□□□ 1.82
SMPD1-209ENST00000533196 NAP1L4Q99733 375 aaKnown RBP26.45■■□□□ 1.82
SMPD1-209ENST00000533196 UNC45AQ9H3U1 944 aa26.45■■□□□ 1.82
SMPD1-209ENST00000533196 KCNJ14Q9UNX9 436 aa26.45■■□□□ 1.82
SMPD1-209ENST00000533196 C5orf67F2Z3F1 127 aa26.44■■□□□ 1.82
SMPD1-209ENST00000533196 CRYBB1P53674 252 aaPredicted RBP26.44■■□□□ 1.82
SMPD1-209ENST00000533196 GPM6BQ13491 265 aa26.44■■□□□ 1.82
SMPD1-209ENST00000533196 INF2Q27J81 1249 aa26.44■■□□□ 1.82
SMPD1-209ENST00000533196 B3GNT9Q6UX72 402 aa26.44■■□□□ 1.82
SMPD1-209ENST00000533196 MIER3Q7Z3K6 550 aa26.44■■□□□ 1.82
SMPD1-209ENST00000533196 METTL13Q8N6R0 699 aa26.44■■□□□ 1.82
SMPD1-209ENST00000533196 ETNPPLQ8TBG4 499 aa26.44■■□□□ 1.82
SMPD1-209ENST00000533196 CLP1Q92989 425 aaKnown RBP26.44■■□□□ 1.82
SMPD1-209ENST00000533196 ERVK-5Q9HDB9 667 aa26.44■■□□□ 1.82
SMPD1-209ENST00000533196 ORC3Q9UBD5 711 aaPredicted RBP26.44■■□□□ 1.82
SMPD1-209ENST00000533196 DDX25Q9UHL0 483 aaKnown RBP26.44■■□□□ 1.82
SMPD1-209ENST00000533196 GPR182O15218 404 aa26.43■■□□□ 1.82
SMPD1-209ENST00000533196 CHMP2AO43633 222 aa26.43■■□□□ 1.82
SMPD1-209ENST00000533196 ZNF862O60290 1169 aa26.43■■□□□ 1.82
SMPD1-209ENST00000533196 CTDNEP1O95476 244 aa26.43■■□□□ 1.82
SMPD1-209ENST00000533196 GCFC2P16383 781 aaKnown RBP26.43■■□□□ 1.82
SMPD1-209ENST00000533196 PRKCEQ02156 737 aa26.43■■□□□ 1.82
SMPD1-209ENST00000533196 NFX1Q12986 1120 aaKnown RBP26.43■■□□□ 1.82
SMPD1-209ENST00000533196 PPP4R3AQ6IN85 833 aa26.43■■□□□ 1.82
SMPD1-209ENST00000533196 NEK8Q86SG6 692 aa26.43■■□□□ 1.82
SMPD1-209ENST00000533196 MAP7D2Q96T17 732 aa26.43■■□□□ 1.82
SMPD1-209ENST00000533196 GINS2Q9Y248 185 aa26.43■■□□□ 1.82
SMPD1-209ENST00000533196 BTG3Q14201 252 aaPredicted RBP26.42■■□□□ 1.82
SMPD1-209ENST00000533196 TIGD5Q53EQ6 642 aa26.42■■□□□ 1.82
SMPD1-209ENST00000533196 TRMT1LQ7Z2T5 733 aaKnown RBP26.42■■□□□ 1.82
SMPD1-209ENST00000533196 CMTR2Q8IYT2 770 aaKnown RBP26.42■■□□□ 1.82
SMPD1-209ENST00000533196 LINC01465Q8N7H1 131 aa26.42■■□□□ 1.82
SMPD1-209ENST00000533196 ADAMTS19Q8TE59 1207 aa26.42■■□□□ 1.82
SMPD1-209ENST00000533196 GTF3C6Q969F1 213 aa26.42■■□□□ 1.82
SMPD1-209ENST00000533196 FAM20AQ96MK3 541 aa26.42■■□□□ 1.82
SMPD1-209ENST00000533196 C11orf84Q9BUA3 381 aaPredicted RBP26.42■■□□□ 1.82
SMPD1-209ENST00000533196 TMX1Q9H3N1 280 aa26.42■■□□□ 1.82
SMPD1-209ENST00000533196 C1orf112Q9NSG2 853 aa26.42■■□□□ 1.82
SMPD1-209ENST00000533196 NOC2LQ9Y3T9 749 aaKnown RBP26.42■■□□□ 1.82
SMPD1-209ENST00000533196 TCF20Q9UGU0 1960 aaKnown RBP26.41■■□□□ 1.82
SMPD1-209ENST00000533196 BMP1P13497 986 aa26.41■■□□□ 1.82
SMPD1-209ENST00000533196 BMPR1AP36894 532 aa26.41■■□□□ 1.82
SMPD1-209ENST00000533196 ME3Q16798 604 aa26.41■■□□□ 1.82
SMPD1-209ENST00000533196 LETM2Q2VYF4 491 aa26.41■■□□□ 1.82
SMPD1-209ENST00000533196 EFCAB12Q6NXP0 572 aa26.41■■□□□ 1.82
SMPD1-209ENST00000533196 PLVAPQ9BX97 442 aa26.41■■□□□ 1.82
SMPD1-209ENST00000533196 LMAN2LQ9H0V9 348 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms