RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 RASSF2P50749 326 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 PAK2Q13177 524 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 STAG2Q8N3U4 1231 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 HYOU1Q9Y4L1 999 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 HOXD10P28358 340 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 KRT76Q01546 638 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 CCDC38Q502W7 563 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 POTEDQ86YR6 584 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 ANKRD13CQ8N6S4 541 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 MMTAG2Q9BU76 263 aaKnown RBP9.42□□□□□ -0.9
CTNND1-232ENST00000532649 EIF2AQ9BY44 585 aaKnown RBP9.42□□□□□ -0.9
CTNND1-232ENST00000532649 EPN1Q9Y6I3 576 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-232ENST00000532649 KRIT1O00522 736 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 HGSO14964 777 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-232ENST00000532649 NFKBIAP25963 317 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 PTPN21Q16825 1174 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 HP1BP3Q5SSJ5 553 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-232ENST00000532649 KAZNQ674X7 775 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 DENND2CQ68D51 928 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 ADAT2Q7Z6V5 191 aaKnown RBP9.42□□□□□ -0.9
CTNND1-232ENST00000532649 RAB17Q9H0T7 212 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 IQGAP1P46940 1657 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 MEGF6O75095 1541 aa9.42□□□□□ -0.9
CTNND1-232ENST00000532649 IKBKBO14920 756 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 FDX1P10109 184 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 CD58P19256 250 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 RASSF7Q02833 373 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 HHIPL2Q6UWX4 724 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 DYDC2Q96IM9 177 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 RASSF4Q9H2L5 321 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 XAB2Q9HCS7 855 aaKnown RBP9.41□□□□□ -0.9
CTNND1-232ENST00000532649 UBE2TQ9NPD8 197 aaPredicted RBP9.41□□□□□ -0.9
CTNND1-232ENST00000532649 ZNF302Q9NR11 478 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 CPSF3Q9UKF6 684 aaKnown RBP9.41□□□□□ -0.9
CTNND1-232ENST00000532649 TMEM131LA2VDJ0 1609 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 PRAMEF18Q5VWM3 479 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 SCARA5Q6ZMJ2 495 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 LDHDQ86WU2 507 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 COL23A1Q86Y22 540 aaPredicted RBP9.41□□□□□ -0.9
CTNND1-232ENST00000532649 MYLK4Q86YV6 388 aaPredicted RBP9.41□□□□□ -0.9
CTNND1-232ENST00000532649 LRRC8AQ8IWT6 810 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 FAM20AQ96MK3 541 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 ABCF3Q9NUQ8 709 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 SCAF8Q9UPN6 1271 aaKnown RBP9.41□□□□□ -0.9
CTNND1-232ENST00000532649 MROH2AA6NES4 1674 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 OCM2P0CE71 109 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 OCMP0CE72 109 aaPredicted RBP9.41□□□□□ -0.9
CTNND1-232ENST00000532649 HSPA8P11142 646 aaKnown RBP9.41□□□□□ -0.9
CTNND1-232ENST00000532649 ANXA13P27216 316 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 VPS41P49754 854 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 MESDQ14696 234 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 SURF1Q15526 300 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 SLFN12LQ6IEE8 588 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 THNSL1Q8IYQ7 743 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 HAUS4Q9H6D7 363 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 ENTPD3O75355 529 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 STX1BP61266 288 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 ELF2Q15723 593 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 RESP18Q5W5W9 173 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 ELMOD1Q8N336 334 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 MCPH1Q8NEM0 835 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 MICAL1Q8TDZ2 1067 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 FAM81BQ96LP2 452 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 SAMSN1Q9NSI8 373 aaKnown RBP9.41□□□□□ -0.9
CTNND1-232ENST00000532649 MYO1FO00160 1098 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 MFSD14CQ5VZR4 134 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 PADI6Q6TGC4 694 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 CCDC13Q8IYE1 715 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 TTC30BQ8N4P2 665 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 TDRD7Q8NHU6 1098 aaKnown RBP9.41□□□□□ -0.9
CTNND1-232ENST00000532649 RBM46Q8TBY0 533 aaKnown RBP9.41□□□□□ -0.9
CTNND1-232ENST00000532649 CDKL2Q92772 493 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 ZNF653Q96CK0 615 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 RABEP2Q9H5N1 569 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 MYOZ2Q9NPC6 264 aa9.41□□□□□ -0.9
CTNND1-232ENST00000532649 ZNF609O15014 1411 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 ARHGEF37A1IGU5 675 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 GOLGA8SH3BPF8 625 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 GFPT2O94808 682 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 RBL2Q08999 1139 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 GOLGA8FQ08AF8 430 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 GOLGA8DPQ0D2H9 430 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 TTBK2Q6IQ55 1244 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 SWSAP1Q6NVH7 229 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 GBP5Q96PP8 586 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 THAP9Q9H5L6 903 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 MTMR4Q9NYA4 1195 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 ADGRB1O14514 1584 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 ZNF233A6NK53 670 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 E9PMD0 336 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 GYS1P13807 737 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 U2AF2P26368 475 aaKnown RBP eCLIP9.4□□□□□ -0.91e-10■■□□□ 14
CTNND1-232ENST00000532649 COPB2P35606 906 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 RAPH1Q70E73 1250 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 FBXO33Q7Z6M2 555 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 SGMS1Q86VZ5 419 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 CLEC10AQ8IUN9 316 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 DCLK2Q8N568 766 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 FAM133AQ8N9E0 248 aa9.4□□□□□ -0.9
CTNND1-232ENST00000532649 ZBED2Q9BTP6 218 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms