RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 LIN7AO14910 233 aaPredicted RBP7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 SPDYE6P0CI01 402 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 IMPDH2P12268 514 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 ELF3P78545 371 aaPredicted RBP7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 ACCSLQ4AC99 568 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 DCAF15Q66K64 600 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 SLFN13Q68D06 897 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 CYB5R4Q7L1T6 521 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 HS2ST1Q7LGA3 356 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 TRPM8Q7Z2W7 1104 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 CCDC25Q86WR0 208 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 SPATA4Q8NEY3 305 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 ENGASEQ8NFI3 743 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 MORC4Q8TE76 937 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 SNRNP27Q8WVK2 155 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 MPHOSPH6Q99547 160 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 DSCC1Q9BVC3 393 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 ETNK1Q9HBU6 452 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 ARHGEF10LQ9HCE6 1279 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 VPS54Q9P1Q0 977 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 ZBTB21Q9ULJ3 1066 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 LRRC37A3O60309 1634 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 KCNJ18B7U540 433 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 PRPF6O94906 941 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 KRT13P13646 458 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 ZNF157P51786 506 aaPredicted RBP7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 KCNJ12Q14500 433 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 RPS6KA1Q15418 735 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 TSGA10IPQ3SY00 556 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 STOX1Q6ZVD7 989 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 C2orf69Q8N8R5 385 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 DYDC2Q96IM9 177 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 ZSCAN10Q96SZ4 725 aaPredicted RBP7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 ABHD10Q9NUJ1 306 aa7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 FAM208AQ9UK61 1670 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-209ENST00000532540 TEX33O43247 280 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 RASSF9O75901 435 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 NQO1P15559 274 aaKnown RBP7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 ECE1P42892 770 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 EIF3BP55884 814 aaKnown RBP7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 RILPL1Q5EBL4 403 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 APOBEC3HQ6NTF7 200 aaKnown RBP7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 ZNF654Q8IZM8 581 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 RASGRP4Q8TDF6 673 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 ZNF274Q96GC6 653 aaPredicted RBP7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 PLIN2Q99541 437 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 RAB17Q9H0T7 212 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 CHMP2BQ9UQN3 213 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 MYH14Q7Z406 1995 aaKnown RBP7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 IGF2BP3O00425 579 aaKnown RBP eCLIP7.34□□□□□ -1.231e-6■■■■□ 19.3
TGFBR3-209ENST00000532540 PEX10O60683 326 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 TMOD1P28289 359 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 RFC1P35251 1148 aaPredicted RBP7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 MTA1Q13330 715 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 ANKRD20A2Q5SQ80 823 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 ANKRD20A1Q5TYW2 823 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 ANKRD20A3Q5VUR7 823 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 TYW1BQ6NUM6 668 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 ACER1Q8TDN7 264 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 RBM41Q96IZ5 413 aaKnown RBP7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 THEGQ9P2T0 379 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 ESYT3A0FGR9 886 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 KLRF2D3W0D1 207 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 OPLAHO14841 1288 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 PPP6R2O75170 966 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 ATP5HO75947 161 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 BAG2O95816 211 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 MYCLP12524 364 aaPredicted RBP7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 EEF2P13639 858 aaKnown RBP7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 CALML3P27482 149 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 MSH2P43246 934 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 GJA8P48165 433 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 DHX9Q08211 1270 aaKnown RBP7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 ZC3H12AQ5D1E8 599 aaKnown RBP7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 OLFML2BQ68BL8 750 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 CCDC62Q6P9F0 684 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 NCAPG2Q86XI2 1143 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 CARD9Q9H257 536 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 GPRC5DQ9NZD1 345 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 MAPK8IP1Q9UQF2 711 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 MED23Q9ULK4 1368 aa7.34□□□□□ -1.23
TGFBR3-209ENST00000532540 RIC1Q4ADV7 1423 aa7.34□□□□□ -1.24
TGFBR3-209ENST00000532540 E2F6O75461 281 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 IL1R1P14778 569 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 DNM2P50570 870 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 MTMR2Q13614 643 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 TOB2Q14106 344 aaPredicted RBP7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 MORC3Q14149 939 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 FYB2Q5VWT5 728 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 NUGGCQ68CJ6 796 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 KRT40Q6A162 431 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 TTBK2Q6IQ55 1244 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 ANKRD13CQ8N6S4 541 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 C17orf50Q8WW18 174 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 VTI1AQ96AJ9 217 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 COA7Q96BR5 231 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 MTRQ99707 1265 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 TSG101Q99816 390 aa7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 NOC4LQ9BVI4 516 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-209ENST00000532540 RTFDC1Q9BY42 306 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms