RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 IER5Q5VY09 327 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 TRIM11Q96F44 468 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 POLR3FQ9H1D9 316 aaPredicted RBP12.23□□□□□ -0.45
PTPRK-221ENST00000532331 KIAA1586Q9HCI6 787 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 STK36Q9NRP7 1315 aa12.23□□□□□ -0.45
PTPRK-221ENST00000532331 SLFN14P0C7P3 912 aa12.22□□□□□ -0.45
PTPRK-221ENST00000532331 EEF1GP26641 437 aaKnown RBP12.22□□□□□ -0.45
PTPRK-221ENST00000532331 USP50Q70EL3 339 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-221ENST00000532331 CYFIP1Q7L576 1253 aa12.22□□□□□ -0.45
PTPRK-221ENST00000532331 SCN4BQ8IWT1 228 aa12.22□□□□□ -0.45
PTPRK-221ENST00000532331 MB21D2Q8IYB1 491 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-221ENST00000532331 CCDC160A6NGH7 325 aa12.22□□□□□ -0.45
PTPRK-221ENST00000532331 CTSHP09668 335 aa12.22□□□□□ -0.45
PTPRK-221ENST00000532331 USP11P51784 963 aa12.22□□□□□ -0.45
PTPRK-221ENST00000532331 ZNF668Q96K58 619 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-221ENST00000532331 PHBP35232 272 aa12.22□□□□□ -0.45
PTPRK-221ENST00000532331 ZNF658Q5TYW1 1059 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-221ENST00000532331 KRT12Q99456 494 aa12.22□□□□□ -0.45
PTPRK-221ENST00000532331 ADCY8P40145 1251 aa12.22□□□□□ -0.45
PTPRK-221ENST00000532331 ORC2Q13416 577 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-221ENST00000532331 CTAGE3PQ8IX95 158 aa12.22□□□□□ -0.45
PTPRK-221ENST00000532331 OPTNQ96CV9 577 aa12.22□□□□□ -0.45
PTPRK-221ENST00000532331 MRPL4Q9BYD3 311 aaKnown RBP12.22□□□□□ -0.45
PTPRK-221ENST00000532331 MAP3K20Q9NYL2 800 aaKnown RBP12.22□□□□□ -0.45
PTPRK-221ENST00000532331 PRR12Q9ULL5 1215 aa12.22□□□□□ -0.45
PTPRK-221ENST00000532331 EPN1Q9Y6I3 576 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-221ENST00000532331 POTEMA6NI47 508 aa12.22□□□□□ -0.45
PTPRK-221ENST00000532331 UPP2O95045 317 aa12.22□□□□□ -0.45
PTPRK-221ENST00000532331 MAPK4P31152 587 aa12.22□□□□□ -0.45
PTPRK-221ENST00000532331 PRPSAP1Q14558 356 aa12.22□□□□□ -0.45
PTPRK-221ENST00000532331 OR6B2Q6IFH4 312 aa12.22□□□□□ -0.45
PTPRK-221ENST00000532331 LRRC8AQ8IWT6 810 aa12.22□□□□□ -0.45
PTPRK-221ENST00000532331 PPP2R5CQ13362 524 aa12.21□□□□□ -0.45
PTPRK-221ENST00000532331 CEP55Q53EZ4 464 aa12.21□□□□□ -0.45
PTPRK-221ENST00000532331 SCFD2Q8WU76 684 aa12.21□□□□□ -0.45
PTPRK-221ENST00000532331 PGBD4Q96DM1 585 aa12.21□□□□□ -0.45
PTPRK-221ENST00000532331 EEF2KMTQ96G04 330 aa12.21□□□□□ -0.45
PTPRK-221ENST00000532331 ZDHHC15Q96MV8 337 aa12.21□□□□□ -0.45
PTPRK-221ENST00000532331 CAP2P40123 477 aa12.21□□□□□ -0.45
PTPRK-221ENST00000532331 GPC3P51654 580 aa12.21□□□□□ -0.45
PTPRK-221ENST00000532331 CUL4AQ13619 759 aa12.21□□□□□ -0.45
PTPRK-221ENST00000532331 CCDC62Q6P9F0 684 aa12.21□□□□□ -0.45
PTPRK-221ENST00000532331 ARRDC4Q8NCT1 418 aa12.21□□□□□ -0.45
PTPRK-221ENST00000532331 SEPT1Q8WYJ6 367 aa12.21□□□□□ -0.45
PTPRK-221ENST00000532331 ATG4CQ96DT6 458 aa12.21□□□□□ -0.45
PTPRK-221ENST00000532331 LXNQ9BS40 222 aa12.21□□□□□ -0.45
PTPRK-221ENST00000532331 AFG3L2Q9Y4W6 797 aa12.21□□□□□ -0.45
PTPRK-221ENST00000532331 GOLGA8SH3BPF8 625 aa12.21□□□□□ -0.45
PTPRK-221ENST00000532331 ATP11AP98196 1134 aa12.21□□□□□ -0.45
PTPRK-221ENST00000532331 NBPF9Q3BBW0 867 aa12.21□□□□□ -0.45
PTPRK-221ENST00000532331 CEP85LQ5SZL2 805 aa12.21□□□□□ -0.45
PTPRK-221ENST00000532331 GKAP1Q5VSY0 366 aaPredicted RBP12.21□□□□□ -0.45
PTPRK-221ENST00000532331 SDCCAG8Q86SQ7 713 aaPredicted RBP12.21□□□□□ -0.45
PTPRK-221ENST00000532331 PIN4Q9Y237 131 aaKnown RBP12.21□□□□□ -0.45
PTPRK-221ENST00000532331 DCDC2CA8MYV0 355 aa12.21□□□□□ -0.46
PTPRK-221ENST00000532331 SLC16A4O15374 487 aa12.21□□□□□ -0.46
PTPRK-221ENST00000532331 NR3C2P08235 984 aa12.21□□□□□ -0.46
PTPRK-221ENST00000532331 MAN1A1P33908 653 aa12.21□□□□□ -0.46
PTPRK-221ENST00000532331 BRD3Q15059 726 aa12.21□□□□□ -0.46
PTPRK-221ENST00000532331 YAF2Q8IY57 180 aa12.21□□□□□ -0.46
PTPRK-221ENST00000532331 STAG2Q8N3U4 1231 aa12.21□□□□□ -0.46
PTPRK-221ENST00000532331 LINC00301Q8NCQ3 95 aa12.21□□□□□ -0.46
PTPRK-221ENST00000532331 GLIS2Q9BZE0 524 aaPredicted RBP12.21□□□□□ -0.46
PTPRK-221ENST00000532331 KLRK1P26718 216 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 DGKDQ16760 1214 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 RNF219Q5W0B1 726 aaPredicted RBP12.2□□□□□ -0.46
PTPRK-221ENST00000532331 VSIG1Q86XK7 387 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 CLEC10AQ8IUN9 316 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 BCL9O00512 1426 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 RGL2O15211 777 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 RGS16O15492 202 aaPredicted RBP12.2□□□□□ -0.46
PTPRK-221ENST00000532331 CPB1P15086 417 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 VEPH1Q14D04 833 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 ZNF449Q6P9G9 518 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 GPATCH11Q8N954 259 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 SPZ1Q9BXG8 430 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 UBE2TQ9NPD8 197 aaPredicted RBP12.2□□□□□ -0.46
PTPRK-221ENST00000532331 TYW1Q9NV66 732 aaKnown RBP12.2□□□□□ -0.46
PTPRK-221ENST00000532331 CPA4Q9UI42 421 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 RCOR1Q9UKL0 485 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 MYO1FO00160 1098 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 IKBKBO14920 756 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 CTNNA1P35221 906 aaKnown RBP12.2□□□□□ -0.46
PTPRK-221ENST00000532331 ZNF131P52739 623 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 KYAT1Q16773 422 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 FAM117BQ6P1L5 589 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 PPP4R3CPQ6ZMV5 832 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 CFAP57Q96MR6 1250 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 PLEKHA4Q9H4M7 779 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 GOLGA8CPA6NN73 597 aa12.2□□□□□ -0.46
PTPRK-221ENST00000532331 NOL3O60936 208 aaKnown RBP12.2□□□□□ -0.46
PTPRK-221ENST00000532331 TTC31Q49AM3 519 aaPredicted RBP12.2□□□□□ -0.46
PTPRK-221ENST00000532331 ARHGAP23Q9P227 1491 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 POTEB3A0JP26 581 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 TRAPPC3O43617 180 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 ARL4AP40617 200 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 GUCY2FP51841 1108 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 ETF1P62495 437 aaKnown RBP12.19□□□□□ -0.46
PTPRK-221ENST00000532331 MAN2A1Q16706 1144 aa12.19□□□□□ -0.46
PTPRK-221ENST00000532331 POTEBQ6S5H4 581 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms