RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 CNTN2Q02246 1040 aa16.72■□□□□ 0.27
SRPRA-206ENST00000532259 EDRF1Q3B7T1 1238 aa16.72■□□□□ 0.27
SRPRA-206ENST00000532259 ZC3H3Q8IXZ2 948 aaKnown RBP16.72■□□□□ 0.27
SRPRA-206ENST00000532259 ANKRD7Q92527 254 aa16.72■□□□□ 0.27
SRPRA-206ENST00000532259 CCDC42Q96M95 316 aa16.72■□□□□ 0.27
SRPRA-206ENST00000532259 BTBD7Q9P203 1132 aa16.72■□□□□ 0.27
SRPRA-206ENST00000532259 ARHGAP20Q9P2F6 1191 aa16.72■□□□□ 0.27
SRPRA-206ENST00000532259 TISP43B9A030 160 aa16.72■□□□□ 0.27
SRPRA-206ENST00000532259 CALUO43852 315 aaPredicted RBP16.72■□□□□ 0.27
SRPRA-206ENST00000532259 RARRES1P49788 294 aa16.72■□□□□ 0.27
SRPRA-206ENST00000532259 CYP2J2P51589 502 aa16.72■□□□□ 0.27
SRPRA-206ENST00000532259 CCDC122Q5T0U0 273 aa16.72■□□□□ 0.27
SRPRA-206ENST00000532259 FOXR2Q6PJQ5 311 aa16.72■□□□□ 0.27
SRPRA-206ENST00000532259 ZNF720Q7Z2F6 126 aa16.72■□□□□ 0.27
SRPRA-206ENST00000532259 PDCL2Q8N4E4 241 aa16.72■□□□□ 0.27
SRPRA-206ENST00000532259 RDH13Q8NBN7 331 aa16.72■□□□□ 0.27
SRPRA-206ENST00000532259 CCDC43Q96MW1 224 aaKnown RBP16.72■□□□□ 0.27
SRPRA-206ENST00000532259 LACRTQ9GZZ8 138 aa16.72■□□□□ 0.27
SRPRA-206ENST00000532259 MAP3K20Q9NYL2 800 aaKnown RBP16.72■□□□□ 0.27
SRPRA-206ENST00000532259 ARMCX3Q9UH62 379 aaPredicted RBP16.72■□□□□ 0.27
SRPRA-206ENST00000532259 MYH11P35749 1972 aa16.71■□□□□ 0.27
SRPRA-206ENST00000532259 ENC1O14682 589 aa16.71■□□□□ 0.27
SRPRA-206ENST00000532259 ZNF263O14978 683 aa16.71■□□□□ 0.27
SRPRA-206ENST00000532259 QARSP47897 775 aaKnown RBP16.71■□□□□ 0.27
SRPRA-206ENST00000532259 BMT2Q1RMZ1 405 aa16.71■□□□□ 0.27
SRPRA-206ENST00000532259 BAP1Q92560 729 aa16.71■□□□□ 0.27
SRPRA-206ENST00000532259 DEF6Q9H4E7 631 aa16.71■□□□□ 0.27
SRPRA-206ENST00000532259 TYW1Q9NV66 732 aaKnown RBP16.71■□□□□ 0.27
SRPRA-206ENST00000532259 KIAA1217Q5T5P2 1943 aa16.71■□□□□ 0.27
SRPRA-206ENST00000532259 PDXKO00764 312 aa16.71■□□□□ 0.26
SRPRA-206ENST00000532259 BACH1O14867 736 aa16.71■□□□□ 0.26
SRPRA-206ENST00000532259 GNA14O95837 355 aa16.71■□□□□ 0.26
SRPRA-206ENST00000532259 FDX1P10109 184 aa16.71■□□□□ 0.26
SRPRA-206ENST00000532259 GAP43P17677 238 aa16.71■□□□□ 0.26
SRPRA-206ENST00000532259 YWHABP31946 246 aaKnown RBP16.71■□□□□ 0.26
SRPRA-206ENST00000532259 EIF4A3P38919 411 aaKnown RBP16.71■□□□□ 0.26
SRPRA-206ENST00000532259 ZNF131P52739 623 aa16.71■□□□□ 0.26
SRPRA-206ENST00000532259 SOX10P56693 466 aa16.71■□□□□ 0.26
SRPRA-206ENST00000532259 GADL1Q6ZQY3 521 aa16.71■□□□□ 0.26
SRPRA-206ENST00000532259 ACAD9Q9H845 621 aa16.71■□□□□ 0.26
SRPRA-206ENST00000532259 HOXC10Q9NYD6 342 aa16.71■□□□□ 0.26
SRPRA-206ENST00000532259 WDR90Q96KV7 1748 aa16.7■□□□□ 0.26
SRPRA-206ENST00000532259 A0A1W2PQJ5 194 aa16.7■□□□□ 0.26
SRPRA-206ENST00000532259 MACROD2A1Z1Q3 448 aa16.7■□□□□ 0.26
SRPRA-206ENST00000532259 SLC9A1P19634 815 aa16.7■□□□□ 0.26
SRPRA-206ENST00000532259 CYLC1P35663 651 aaPredicted RBP16.7■□□□□ 0.26
SRPRA-206ENST00000532259 MARSP56192 900 aaKnown RBP16.7■□□□□ 0.26
SRPRA-206ENST00000532259 TDRD12Q587J7 1177 aaKnown RBP16.7■□□□□ 0.26
SRPRA-206ENST00000532259 FIGNQ5HY92 759 aa16.7■□□□□ 0.26
SRPRA-206ENST00000532259 PPP4R3CPQ6ZMV5 832 aa16.7■□□□□ 0.26
SRPRA-206ENST00000532259 TBC1D22BQ9NU19 505 aa16.7■□□□□ 0.26
SRPRA-206ENST00000532259 PUF60Q9UHX1 559 aaKnown RBP16.7■□□□□ 0.26
SRPRA-206ENST00000532259 PLAGL2Q9UPG8 496 aa16.7■□□□□ 0.26
SRPRA-206ENST00000532259 CSADQ9Y600 493 aa16.7■□□□□ 0.26
SRPRA-206ENST00000532259 OTOFQ9HC10 1997 aa16.7■□□□□ 0.26
SRPRA-206ENST00000532259 FAM170AA1A519 330 aa16.7■□□□□ 0.26
SRPRA-206ENST00000532259 K7ENM7 598 aa16.7■□□□□ 0.26
SRPRA-206ENST00000532259 PPP1R12BO60237 982 aaPredicted RBP16.7■□□□□ 0.26
SRPRA-206ENST00000532259 IPO7O95373 1038 aaKnown RBP16.7■□□□□ 0.26
SRPRA-206ENST00000532259 CCND2P30279 289 aa16.7■□□□□ 0.26
SRPRA-206ENST00000532259 TTLL12Q14166 644 aaPredicted RBP16.7■□□□□ 0.26
SRPRA-206ENST00000532259 SH3D19Q5HYK7 790 aa16.7■□□□□ 0.26
SRPRA-206ENST00000532259 NSUN6Q8TEA1 469 aaKnown RBP16.7■□□□□ 0.26
SRPRA-206ENST00000532259 MRFAP1Q9Y605 127 aa16.7■□□□□ 0.26
SRPRA-206ENST00000532259 PTPRFP10586 1907 aa16.69■□□□□ 0.26
SRPRA-206ENST00000532259 XRCC5P13010 732 aaKnown RBP16.69■□□□□ 0.26
SRPRA-206ENST00000532259 HOXA7P31268 230 aaPredicted RBP16.69■□□□□ 0.26
SRPRA-206ENST00000532259 OAZ1P54368 228 aa16.69■□□□□ 0.26
SRPRA-206ENST00000532259 SP2Q02086 613 aa16.69■□□□□ 0.26
SRPRA-206ENST00000532259 SYCP3Q8IZU3 236 aa16.69■□□□□ 0.26
SRPRA-206ENST00000532259 JAKMIP2Q96AA8 810 aa16.69■□□□□ 0.26
SRPRA-206ENST00000532259 INPP4AQ96PE3 977 aaPredicted RBP16.69■□□□□ 0.26
SRPRA-206ENST00000532259 AKR1B10O60218 316 aa16.69■□□□□ 0.26
SRPRA-206ENST00000532259 KCNA2P16389 499 aa16.69■□□□□ 0.26
SRPRA-206ENST00000532259 GUCY2CP25092 1073 aa16.69■□□□□ 0.26
SRPRA-206ENST00000532259 PPP2R3AQ06190 1150 aa16.69■□□□□ 0.26
SRPRA-206ENST00000532259 GFPT1Q06210 699 aaPredicted RBP16.69■□□□□ 0.26
SRPRA-206ENST00000532259 RAPGEF1Q13905 1077 aa16.69■□□□□ 0.26
SRPRA-206ENST00000532259 ANKRD13CQ8N6S4 541 aa16.69■□□□□ 0.26
SRPRA-206ENST00000532259 PAGR1Q9BTK6 254 aa16.69■□□□□ 0.26
SRPRA-206ENST00000532259 PCIF1Q9H4Z3 704 aa16.69■□□□□ 0.26
SRPRA-206ENST00000532259 HDAC6Q9UBN7 1215 aa16.69■□□□□ 0.26
SRPRA-206ENST00000532259 CTAGE9A4FU28 777 aa16.68■□□□□ 0.26
SRPRA-206ENST00000532259 ATP2A1O14983 1001 aa16.68■□□□□ 0.26
SRPRA-206ENST00000532259 ZNF862O60290 1169 aa16.68■□□□□ 0.26
SRPRA-206ENST00000532259 EPB41P11171 864 aaKnown RBP16.68■□□□□ 0.26
SRPRA-206ENST00000532259 MUTP22033 750 aa16.68■□□□□ 0.26
SRPRA-206ENST00000532259 KIF11P52732 1056 aa16.68■□□□□ 0.26
SRPRA-206ENST00000532259 PDXDC1Q6P996 788 aa16.68■□□□□ 0.26
SRPRA-206ENST00000532259 ANO5Q75V66 913 aa16.68■□□□□ 0.26
SRPRA-206ENST00000532259 NLRX1Q86UT6 975 aa16.68■□□□□ 0.26
SRPRA-206ENST00000532259 KCTD17Q8N5Z5 321 aa16.68■□□□□ 0.26
SRPRA-206ENST00000532259 ZSWIM2Q8NEG5 633 aa16.68■□□□□ 0.26
SRPRA-206ENST00000532259 CDCA5Q96FF9 252 aa16.68■□□□□ 0.26
SRPRA-206ENST00000532259 CENPFP49454 3210 aa16.68■□□□□ 0.26
SRPRA-206ENST00000532259 WDR64B1ANS9 1081 aa16.68■□□□□ 0.26
SRPRA-206ENST00000532259 TLR2O60603 784 aa16.68■□□□□ 0.26
SRPRA-206ENST00000532259 XKR9Q5GH70 373 aa16.68■□□□□ 0.26
SRPRA-206ENST00000532259 TEX35Q5T0J7 233 aa16.68■□□□□ 0.26
SRPRA-206ENST00000532259 GJB7Q6PEY0 223 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms