RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-215	ENST00000531558	TMEM150B	A6NC51	233 aa		28.94	■■■□□ 2.22
PICALM-215	ENST00000531558	POTEM	A6NI47	508 aa		28.94	■■■□□ 2.22
PICALM-215	ENST00000531558	ZBBX	A8MT70	800 aa		28.94	■■■□□ 2.22
PICALM-215	ENST00000531558	BAIAP3	O94812	1187 aa		28.94	■■■□□ 2.22
PICALM-215	ENST00000531558	IER5	Q5VY09	327 aa		28.94	■■■□□ 2.22
PICALM-215	ENST00000531558	ANO5	Q75V66	913 aa		28.94	■■■□□ 2.22
PICALM-215	ENST00000531558	KIAA0319L	Q8IZA0	1049 aa		28.94	■■■□□ 2.22
PICALM-215	ENST00000531558	NME8	Q8N427	588 aa		28.94	■■■□□ 2.22
PICALM-215	ENST00000531558	NEK9	Q8TD19	979 aa		28.94	■■■□□ 2.22
PICALM-215	ENST00000531558	EIF2AK1	Q9BQI3	630 aa	Known RBP	28.94	■■■□□ 2.22
PICALM-215	ENST00000531558	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	28.94	■■■□□ 2.22
PICALM-215	ENST00000531558	DDX11L8	A8MPP1	907 aa		28.93	■■■□□ 2.22
PICALM-215	ENST00000531558	RBAK-RBAKDN	I3L0D1	243 aa		28.93	■■■□□ 2.22
PICALM-215	ENST00000531558	SYT1	P21579	422 aa		28.93	■■■□□ 2.22
PICALM-215	ENST00000531558	SMAD3	P84022	425 aa	Known RBP	28.93	■■■□□ 2.22
PICALM-215	ENST00000531558	CYP4A11	Q02928	519 aa		28.93	■■■□□ 2.22
PICALM-215	ENST00000531558	TCTN1	Q2MV58	587 aa		28.93	■■■□□ 2.22
PICALM-215	ENST00000531558	MTERF2	Q49AM1	385 aa		28.93	■■■□□ 2.22
PICALM-215	ENST00000531558	PLEKHG4	Q58EX7	1191 aa		28.93	■■■□□ 2.22
PICALM-215	ENST00000531558	C4orf19	Q8IY42	314 aa		28.93	■■■□□ 2.22
PICALM-215	ENST00000531558	METTL13	Q8N6R0	699 aa		28.93	■■■□□ 2.22
PICALM-215	ENST00000531558	HSD17B14	Q9BPX1	270 aa		28.93	■■■□□ 2.22
PICALM-215	ENST00000531558	OSBPL7	Q9BZF2	842 aa		28.93	■■■□□ 2.22
PICALM-215	ENST00000531558	ZSWIM4	Q9H7M6	989 aa		28.93	■■■□□ 2.22
PICALM-215	ENST00000531558	TRPV2	Q9Y5S1	764 aa		28.93	■■■□□ 2.22
PICALM-215	ENST00000531558	SZT2	Q5T011	3432 aa		28.92	■■■□□ 2.22
PICALM-215	ENST00000531558	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	28.92	■■■□□ 2.22
PICALM-215	ENST00000531558	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	28.92	■■■□□ 2.22
PICALM-215	ENST00000531558	TEC	P42680	631 aa		28.92	■■■□□ 2.22
PICALM-215	ENST00000531558	TBC1D8B	Q0IIM8	1120 aa		28.92	■■■□□ 2.22
PICALM-215	ENST00000531558	TMEM62	Q0P6H9	643 aa		28.92	■■■□□ 2.22
PICALM-215	ENST00000531558	PTGDR	Q13258	359 aa		28.92	■■■□□ 2.22
PICALM-215	ENST00000531558	CTTN	Q14247	550 aa	Known RBP	28.92	■■■□□ 2.22
PICALM-215	ENST00000531558	FAM109B	Q6ICB4	259 aa	Predicted RBP	28.92	■■■□□ 2.22
PICALM-215	ENST00000531558	BRAP	Q7Z569	592 aa		28.92	■■■□□ 2.22
PICALM-215	ENST00000531558	LINC01465	Q8N7H1	131 aa		28.92	■■■□□ 2.22
PICALM-215	ENST00000531558	CEP89	Q96ST8	783 aa		28.92	■■■□□ 2.22
PICALM-215	ENST00000531558	SLC4A7	Q9Y6M7	1214 aa		28.92	■■■□□ 2.22
PICALM-215	ENST00000531558		M0QZ92	97 aa		28.91	■■■□□ 2.22
PICALM-215	ENST00000531558	SLITRK3	O94933	977 aa		28.91	■■■□□ 2.22
PICALM-215	ENST00000531558	GHR	P10912	638 aa		28.91	■■■□□ 2.22
PICALM-215	ENST00000531558	PLA2G4F	Q68DD2	849 aa		28.91	■■■□□ 2.22
PICALM-215	ENST00000531558	DBF4B	Q8NFT6	615 aa		28.91	■■■□□ 2.22
PICALM-215	ENST00000531558	SEPT8	Q92599	483 aa		28.91	■■■□□ 2.22
PICALM-215	ENST00000531558	LAD1	O00515	517 aa		28.9	■■■□□ 2.22
PICALM-215	ENST00000531558	YWHAB	P31946	246 aa	Known RBP	28.9	■■■□□ 2.22
PICALM-215	ENST00000531558	CLCN3	P51790	818 aa		28.9	■■■□□ 2.22
PICALM-215	ENST00000531558	LPIN1	Q14693	890 aa		28.9	■■■□□ 2.22
PICALM-215	ENST00000531558	TMEM266	Q2M3C6	531 aa		28.9	■■■□□ 2.22
PICALM-215	ENST00000531558	FBXO47	Q5MNV8	452 aa		28.9	■■■□□ 2.22
PICALM-215	ENST00000531558	EFCAB12	Q6NXP0	572 aa		28.9	■■■□□ 2.22
PICALM-215	ENST00000531558	FERMT3	Q86UX7	667 aa		28.9	■■■□□ 2.22
PICALM-215	ENST00000531558	TPH2	Q8IWU9	490 aa		28.9	■■■□□ 2.22
PICALM-215	ENST00000531558	LRRC71	Q8N4P6	559 aa		28.9	■■■□□ 2.22
PICALM-215	ENST00000531558	SH2D3A	Q9BRG2	576 aa		28.9	■■■□□ 2.22
PICALM-215	ENST00000531558	CELF4	Q9BZC1	486 aa	Known RBP	28.9	■■■□□ 2.22
PICALM-215	ENST00000531558	KDM3A	Q9Y4C1	1321 aa		28.9	■■■□□ 2.22
PICALM-215	ENST00000531558	ABHD14A-ACY1	A0A1B0GW23	586 aa		28.89	■■■□□ 2.22
PICALM-215	ENST00000531558	LYPLA2	O95372	231 aa		28.89	■■■□□ 2.22
PICALM-215	ENST00000531558	TMOD1	P28289	359 aa		28.89	■■■□□ 2.22
PICALM-215	ENST00000531558	FXR2	P51116	673 aa	Known RBP eCLIP	28.89	■■■□□ 2.22	5e-15	■■□□□ 11.9
PICALM-215	ENST00000531558	IKBKE	Q14164	716 aa		28.89	■■■□□ 2.22
PICALM-215	ENST00000531558	GPR153	Q6NV75	609 aa		28.89	■■■□□ 2.22
PICALM-215	ENST00000531558	MAP7D2	Q96T17	732 aa		28.89	■■■□□ 2.22
PICALM-215	ENST00000531558	IFIH1	Q9BYX4	1025 aa	Known RBP	28.89	■■■□□ 2.22
PICALM-215	ENST00000531558	CYP26B1	Q9NR63	512 aa		28.89	■■■□□ 2.22
PICALM-215	ENST00000531558	SI	P14410	1827 aa		28.88	■■■□□ 2.21
PICALM-215	ENST00000531558	GRXCR1	A8MXD5	290 aa		28.88	■■■□□ 2.21
PICALM-215	ENST00000531558	EFCAB14	O75071	495 aa		28.88	■■■□□ 2.21
PICALM-215	ENST00000531558	HSP90AA1	P07900	732 aa	Known RBP	28.88	■■■□□ 2.21
PICALM-215	ENST00000531558	PRPH	P41219	470 aa		28.88	■■■□□ 2.21
PICALM-215	ENST00000531558	TSHZ1	Q6ZSZ6	1077 aa		28.88	■■■□□ 2.21
PICALM-215	ENST00000531558	SUGCT	Q9HAC7	445 aa		28.88	■■■□□ 2.21
PICALM-215	ENST00000531558	PPME1	Q9Y570	386 aa		28.88	■■■□□ 2.21
PICALM-215	ENST00000531558	SQOR	Q9Y6N5	450 aa		28.88	■■■□□ 2.21
PICALM-215	ENST00000531558	IGKV6-21	A0A0C4DH24	114 aa		28.87	■■■□□ 2.21
PICALM-215	ENST00000531558	VTN	P04004	478 aa		28.87	■■■□□ 2.21
PICALM-215	ENST00000531558	ATP2A2	P16615	1042 aa	Known RBP	28.87	■■■□□ 2.21
PICALM-215	ENST00000531558	KCNJ6	P48051	423 aa		28.87	■■■□□ 2.21
PICALM-215	ENST00000531558	NPEPPS	P55786	919 aa		28.87	■■■□□ 2.21
PICALM-215	ENST00000531558	WDR5	P61964	334 aa	Known RBP	28.87	■■■□□ 2.21
PICALM-215	ENST00000531558	OTUD6A	Q7L8S5	288 aa		28.87	■■■□□ 2.21
PICALM-215	ENST00000531558	APBB2	Q92870	758 aa		28.87	■■■□□ 2.21
PICALM-215	ENST00000531558	CEP170P1	Q96L14	293 aa		28.87	■■■□□ 2.21
PICALM-215	ENST00000531558	SLC9A7	Q96T83	725 aa		28.87	■■■□□ 2.21
PICALM-215	ENST00000531558	TUFT1	Q9NNX1	390 aa		28.87	■■■□□ 2.21
PICALM-215	ENST00000531558	MTMR6	Q9Y217	621 aa		28.87	■■■□□ 2.21
PICALM-215	ENST00000531558	AKT3	Q9Y243	479 aa		28.87	■■■□□ 2.21
PICALM-215	ENST00000531558	MAF	O75444	373 aa	Predicted RBP	28.86	■■■□□ 2.21
PICALM-215	ENST00000531558	ATP2C1	P98194	919 aa	Predicted RBP	28.86	■■■□□ 2.21
PICALM-215	ENST00000531558	MKRN4P	Q13434	485 aa	Predicted RBP	28.86	■■■□□ 2.21
PICALM-215	ENST00000531558	ERMN	Q8TAM6	284 aa		28.86	■■■□□ 2.21
PICALM-215	ENST00000531558	PHOSPHO2	Q8TCD6	241 aa		28.86	■■■□□ 2.21
PICALM-215	ENST00000531558	POLR3C	Q9BUI4	534 aa	Predicted RBP	28.86	■■■□□ 2.21
PICALM-215	ENST00000531558	GINS2	Q9Y248	185 aa		28.86	■■■□□ 2.21
PICALM-215	ENST00000531558	ZBTB39	O15060	712 aa		28.85	■■■□□ 2.21
PICALM-215	ENST00000531558	STX6	O43752	255 aa		28.85	■■■□□ 2.21
PICALM-215	ENST00000531558	SPATA31C1	P0DKV0	1188 aa		28.85	■■■□□ 2.21
PICALM-215	ENST00000531558	REST	Q13127	1097 aa		28.85	■■■□□ 2.21
PICALM-215	ENST00000531558	IGSF22	Q8N9C0	903 aa		28.85	■■■□□ 2.21

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms