RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, human

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-209	ENST00000531474	TSEN34	Q9BSV6	310 aa	Known RBP	10.53	□□□□□ -0.72
NXF1-209	ENST00000531474	MTG1	Q9BT17	334 aa	Predicted RBP	10.53	□□□□□ -0.72
NXF1-209	ENST00000531474	TTC12	Q9H892	705 aa	Predicted RBP	10.53	□□□□□ -0.72
NXF1-209	ENST00000531474	DISC1	Q9NRI5	854 aa		10.53	□□□□□ -0.72
NXF1-209	ENST00000531474	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.53	□□□□□ -0.72
NXF1-209	ENST00000531474	PHF24	Q9UPV7	400 aa		10.53	□□□□□ -0.72
NXF1-209	ENST00000531474		A0A1W2PQ45	241 aa	Predicted RBP	10.52	□□□□□ -0.73
NXF1-209	ENST00000531474		A0A1W2PQY0	241 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	BACH1	O14867	736 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	CABYR	O75952	493 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	SERPINC1	P01008	464 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	PSAP	P07602	524 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	SUPT20HL2	P0C7V6	817 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	HOXD8	P13378	290 aa	Predicted RBP	10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	CDK11B	P21127	795 aa	Known RBP	10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	SFN	P31947	248 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	AFM	P43652	599 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	FXR2	P51116	673 aa	Known RBP eCLIP	10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	JAK3	P52333	1124 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	TERF1	P54274	439 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	UBASH3A	P57075	661 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	FANCC	Q00597	558 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	PPP2R5C	Q13362	524 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	STIM1	Q13586	685 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	KCNB1	Q14721	858 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	SPATA1	Q5VX52	437 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	ABHD15	Q6UXT9	468 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	IFNLR1	Q8IU57	520 aa	Predicted RBP	10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	GLG1	Q92896	1179 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	PAWR	Q96IZ0	340 aa	Known RBP	10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	GLT1D1	Q96MS3	346 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	SENP6	Q9GZR1	1112 aa	Predicted RBP	10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	C11orf49	Q9H6J7	331 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	AZI2	Q9H6S1	392 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	ZNF215	Q9UL58	517 aa	Predicted RBP	10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	PCDHA12	Q9UN75	941 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	PCDHA10	Q9Y5I2	948 aa		10.52	□□□□□ -0.73
NXF1-209	ENST00000531474	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	POTEM	A6NI47	508 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	EML1	O00423	815 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	F2	P00734	622 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	MARK3	P27448	753 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	TEC	P42680	631 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	PSEN2	P49810	448 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	ATN1	P54259	1190 aa	Predicted RBP	10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	PSMC6	P62333	389 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	NOLC1	Q14978	699 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	IL17A	Q16552	155 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	ZNF658	Q5TYW1	1059 aa	Predicted RBP	10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	FAM160B1	Q5W0V3	765 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	ISM2	Q6H9L7	571 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	PDXDC2P	Q6P474	469 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	B3GNT9	Q6UX72	402 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	NECAB2	Q7Z6G3	386 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	CABP7	Q86V35	215 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	KCTD17	Q8N5Z5	321 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	IGSF22	Q8N9C0	903 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	CCDC150	Q8NCX0	1101 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	RDM1	Q8NG50	284 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	C16orf70	Q9BSU1	422 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	STARD7	Q9NQZ5	370 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	ZNF302	Q9NR11	478 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	GABBR1	Q9UBS5	961 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	STK17A	Q9UEE5	414 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474	EMSY	Q7Z589	1322 aa		10.51	□□□□□ -0.73
NXF1-209	ENST00000531474		A0A087X0B3	334 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474		H3BRB1	525 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	LGR5	O75473	907 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	CAPN15	O75808	1086 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	ATG7	O95352	703 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	PRR29	P0C7W0	189 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	COL6A1	P12109	1028 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	STAT5B	P51692	787 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	SPAG1	Q07617	926 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	SPIRE1	Q08AE8	756 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	MFSD10	Q14728	455 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	TPD52L1	Q16890	204 aa	Predicted RBP	10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	FILIP1L	Q4L180	1135 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	FAM47C	Q5HY64	1035 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	KRT79	Q5XKE5	535 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	SWSAP1	Q6NVH7	229 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	CCDC60	Q8IWA6	550 aa	Predicted RBP	10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	LRRC8A	Q8IWT6	810 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	BANK1	Q8NDB2	785 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	ANKRD20A12P	Q8NF67	263 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	KIAA1524	Q8TCG1	905 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	PPP1R13L	Q8WUF5	828 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	KAT2B	Q92831	832 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	PCYT2	Q99447	389 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	KATNAL1	Q9BW62	490 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	SMARCAD1	Q9H4L7	1026 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	TUT1	Q9H6E5	874 aa	Known RBP	10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	SPTLC3	Q9NUV7	552 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	KBTBD4	Q9NVX7	518 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	ERAP1	Q9NZ08	941 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	IFNK	Q9P0W0	207 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	LRWD1	Q9UFC0	647 aa		10.5	□□□□□ -0.73
NXF1-209	ENST00000531474	DOCK5	Q9H7D0	1870 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	IGKV6D-21	A0A0A0MT36	114 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474		A0A0U1RQG5	324 aa	Predicted RBP	10.49	□□□□□ -0.73

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