RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 TCF25Q9BQ70 676 aa10.56□□□□□ -0.72
NEDD8-206ENST00000531430 LZTS2Q9BRK4 669 aa10.56□□□□□ -0.72
NEDD8-206ENST00000531430 RNF216Q9NWF9 866 aaPredicted RBP10.56□□□□□ -0.72
NEDD8-206ENST00000531430 ST3GAL5Q9UNP4 418 aa10.56□□□□□ -0.72
NEDD8-206ENST00000531430 SQORQ9Y6N5 450 aa10.56□□□□□ -0.72
NEDD8-206ENST00000531430 IGSF9BQ9UPX0 1349 aa10.56□□□□□ -0.72
NEDD8-206ENST00000531430 ATG2AQ2TAZ0 1938 aa10.55□□□□□ -0.72
NEDD8-206ENST00000531430 SMIM35A0A1B0GVV1 85 aa10.55□□□□□ -0.72
NEDD8-206ENST00000531430 GPR182O15218 404 aa10.55□□□□□ -0.72
NEDD8-206ENST00000531430 MAFGO15525 162 aa10.55□□□□□ -0.72
NEDD8-206ENST00000531430 MGEA5O60502 916 aa10.55□□□□□ -0.72
NEDD8-206ENST00000531430 ARP10275 920 aa10.55□□□□□ -0.72
NEDD8-206ENST00000531430 ATF7P17544 494 aaPredicted RBP10.55□□□□□ -0.72
NEDD8-206ENST00000531430 KRT17Q04695 432 aa10.55□□□□□ -0.72
NEDD8-206ENST00000531430 UBE3AQ05086 875 aa10.55□□□□□ -0.72
NEDD8-206ENST00000531430 ODR4Q5SWX8 454 aa10.55□□□□□ -0.72
NEDD8-206ENST00000531430 ANKRD54Q6NXT1 300 aa10.55□□□□□ -0.72
NEDD8-206ENST00000531430 SLC24A5Q71RS6 500 aa10.55□□□□□ -0.72
NEDD8-206ENST00000531430 METTL13Q8N6R0 699 aa10.55□□□□□ -0.72
NEDD8-206ENST00000531430 COLGALT1Q8NBJ5 622 aa10.55□□□□□ -0.72
NEDD8-206ENST00000531430 KREMEN2Q8NCW0 462 aa10.55□□□□□ -0.72
NEDD8-206ENST00000531430 ATP8B4Q8TF62 1192 aa10.55□□□□□ -0.72
NEDD8-206ENST00000531430 ASIC4Q96FT7 647 aa10.55□□□□□ -0.72
NEDD8-206ENST00000531430 RIPOR3Q96MK2 946 aa10.55□□□□□ -0.72
NEDD8-206ENST00000531430 CDCA3Q99618 268 aaPredicted RBP10.55□□□□□ -0.72
NEDD8-206ENST00000531430 MXRA8Q9BRK3 442 aa10.55□□□□□ -0.72
NEDD8-206ENST00000531430 SPZ1Q9BXG8 430 aa10.55□□□□□ -0.72
NEDD8-206ENST00000531430 RGS18Q9NS28 235 aa10.55□□□□□ -0.72
NEDD8-206ENST00000531430 KCNH7Q9NS40 1196 aa10.55□□□□□ -0.72
NEDD8-206ENST00000531430 COL4A6Q14031 1691 aa10.54□□□□□ -0.72
NEDD8-206ENST00000531430 LAMA4Q16363 1823 aa10.54□□□□□ -0.72
NEDD8-206ENST00000531430 HIDE1A8MVS5 230 aa10.54□□□□□ -0.72
NEDD8-206ENST00000531430 PRC1O43663 620 aa10.54□□□□□ -0.72
NEDD8-206ENST00000531430 WEE2P0C1S8 567 aa10.54□□□□□ -0.72
NEDD8-206ENST00000531430 PBX3P40426 434 aa10.54□□□□□ -0.72
NEDD8-206ENST00000531430 ANTXR2P58335 489 aa10.54□□□□□ -0.72
NEDD8-206ENST00000531430 KIZQ2M2Z5 673 aa10.54□□□□□ -0.72
NEDD8-206ENST00000531430 FAM160B1Q5W0V3 765 aa10.54□□□□□ -0.72
NEDD8-206ENST00000531430 PDE12Q6L8Q7 609 aaKnown RBP10.54□□□□□ -0.72
NEDD8-206ENST00000531430 CES5AQ6NT32 575 aa10.54□□□□□ -0.72
NEDD8-206ENST00000531430 PLPPR4Q7Z2D5 763 aa10.54□□□□□ -0.72
NEDD8-206ENST00000531430 ABI1Q8IZP0 508 aa10.54□□□□□ -0.72
NEDD8-206ENST00000531430 CRIPAKQ8N1N5 446 aa10.54□□□□□ -0.72
NEDD8-206ENST00000531430 MRPS27Q92552 414 aaKnown RBP10.54□□□□□ -0.72
NEDD8-206ENST00000531430 S1PR5Q9H228 398 aa10.54□□□□□ -0.72
NEDD8-206ENST00000531430 MFSD1Q9H3U5 465 aa10.54□□□□□ -0.72
NEDD8-206ENST00000531430 LY9Q9HBG7 655 aa10.54□□□□□ -0.72
NEDD8-206ENST00000531430 ERVK-5Q9HDB9 667 aa10.54□□□□□ -0.72
NEDD8-206ENST00000531430 C1orf112Q9NSG2 853 aa10.54□□□□□ -0.72
NEDD8-206ENST00000531430 CDH22Q9UJ99 828 aa10.54□□□□□ -0.72
NEDD8-206ENST00000531430 NR2E1Q9Y466 385 aa10.54□□□□□ -0.72
NEDD8-206ENST00000531430 LOXHD1Q8IVV2 1947 aa10.54□□□□□ -0.72
NEDD8-206ENST00000531430 MYO10Q9HD67 2058 aa10.53□□□□□ -0.72
NEDD8-206ENST00000531430 HBP1O60381 514 aa10.53□□□□□ -0.72
NEDD8-206ENST00000531430 DDAH1O94760 285 aa10.53□□□□□ -0.72
NEDD8-206ENST00000531430 ZSCAN20P17040 1043 aaPredicted RBP10.53□□□□□ -0.72
NEDD8-206ENST00000531430 LAG3P18627 525 aa10.53□□□□□ -0.72
NEDD8-206ENST00000531430 SMARCA1P28370 1054 aa10.53□□□□□ -0.72
NEDD8-206ENST00000531430 SWSAP1Q6NVH7 229 aa10.53□□□□□ -0.72
NEDD8-206ENST00000531430 PDXDC2PQ6P474 469 aa10.53□□□□□ -0.72
NEDD8-206ENST00000531430 SYCE2Q6PIF2 218 aa10.53□□□□□ -0.72
NEDD8-206ENST00000531430 SYNE3Q6ZMZ3 975 aa10.53□□□□□ -0.72
NEDD8-206ENST00000531430 KIAA0319LQ8IZA0 1049 aa10.53□□□□□ -0.72
NEDD8-206ENST00000531430 TMTC2Q8N394 836 aa10.53□□□□□ -0.72
NEDD8-206ENST00000531430 EXOC6Q8TAG9 804 aa10.53□□□□□ -0.72
NEDD8-206ENST00000531430 SUSD6Q92537 303 aa10.53□□□□□ -0.72
NEDD8-206ENST00000531430 ZNF668Q96K58 619 aaPredicted RBP10.53□□□□□ -0.72
NEDD8-206ENST00000531430 MAP3K14Q99558 947 aa10.53□□□□□ -0.72
NEDD8-206ENST00000531430 OSMRQ99650 979 aa10.53□□□□□ -0.72
NEDD8-206ENST00000531430 LRRC2Q9BYS8 371 aa10.53□□□□□ -0.72
NEDD8-206ENST00000531430 CWH43Q9H720 699 aa10.53□□□□□ -0.72
NEDD8-206ENST00000531430 AGO4Q9HCK5 861 aaKnown RBP10.53□□□□□ -0.72
NEDD8-206ENST00000531430 ZNF302Q9NR11 478 aa10.53□□□□□ -0.72
NEDD8-206ENST00000531430 SLC12A7Q9Y666 1083 aa10.53□□□□□ -0.72
NEDD8-206ENST00000531430 FSD2A1L4K1 749 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 SPDYE4A6NLX3 237 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 C9IYK1 514 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 NT5C1B-RDH14C9J2C7 533 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 STK25O00506 426 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 GALR2O43603 387 aaPredicted RBP10.52□□□□□ -0.73
NEDD8-206ENST00000531430 CXCL14O95715 111 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 VTNP04004 478 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 CHMLP26374 656 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 PDE4AP27815 886 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 MCM5P33992 734 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 CRYBB1P53674 252 aaPredicted RBP10.52□□□□□ -0.73
NEDD8-206ENST00000531430 NAPAP54920 295 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 MTMR3Q13615 1198 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 TPRNQ4KMQ1 711 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 RARS2Q5T160 578 aaKnown RBP10.52□□□□□ -0.73
NEDD8-206ENST00000531430 TTC22Q5TAA0 569 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 KCNT2Q6UVM3 1135 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 ASCL5Q7RTU5 278 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 MB21D2Q8IYB1 491 aaPredicted RBP10.52□□□□□ -0.73
NEDD8-206ENST00000531430 C12orf76Q8N812 135 aaPredicted RBP10.52□□□□□ -0.73
NEDD8-206ENST00000531430 FLCNQ8NFG4 579 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 TMEM40Q8WWA1 233 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 CASP10Q92851 521 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 ZNF558Q96NG5 402 aa10.52□□□□□ -0.73
NEDD8-206ENST00000531430 SMOC2Q9H3U7 446 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms