RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ADAMTS4O75173 837 aa21.21■□□□□ 0.99
SMPD1-205ENST00000531303 KRT18P05783 430 aaKnown RBP21.21■□□□□ 0.99
SMPD1-205ENST00000531303 XRCC6P12956 609 aaKnown RBP eCLIP21.21■□□□□ 0.99
SMPD1-205ENST00000531303 RARRES1P49788 294 aa21.21■□□□□ 0.99
SMPD1-205ENST00000531303 MDM2Q00987 491 aaPredicted RBP21.21■□□□□ 0.99
SMPD1-205ENST00000531303 AMPD3Q01432 767 aa21.21■□□□□ 0.99
SMPD1-205ENST00000531303 LHX8Q68G74 356 aa21.21■□□□□ 0.99
SMPD1-205ENST00000531303 KCTD17Q8N5Z5 321 aa21.21■□□□□ 0.99
SMPD1-205ENST00000531303 FAM167AQ96KS9 214 aa21.21■□□□□ 0.99
SMPD1-205ENST00000531303 RUSC1Q9BVN2 902 aa21.21■□□□□ 0.99
SMPD1-205ENST00000531303 KAT6AQ92794 2004 aa21.21■□□□□ 0.99
SMPD1-205ENST00000531303 GTPBP6O43824 516 aaPredicted RBP21.2■□□□□ 0.98
SMPD1-205ENST00000531303 ZEB2O60315 1214 aa21.2■□□□□ 0.98
SMPD1-205ENST00000531303 PADI6Q6TGC4 694 aa21.2■□□□□ 0.98
SMPD1-205ENST00000531303 ATP8B4Q8TF62 1192 aa21.2■□□□□ 0.98
SMPD1-205ENST00000531303 DEFB118Q96PH6 123 aa21.2■□□□□ 0.98
SMPD1-205ENST00000531303 POLD4Q9HCU8 107 aa21.2■□□□□ 0.98
SMPD1-205ENST00000531303 FRMPD3Q5JV73 1810 aa21.2■□□□□ 0.98
SMPD1-205ENST00000531303 ARID2Q68CP9 1835 aa21.2■□□□□ 0.98
SMPD1-205ENST00000531303 USO1O60763 962 aaKnown RBP21.2■□□□□ 0.98
SMPD1-205ENST00000531303 CYP11B2P19099 503 aa21.2■□□□□ 0.98
SMPD1-205ENST00000531303 SLC26A2P50443 739 aa21.2■□□□□ 0.98
SMPD1-205ENST00000531303 CACNB1Q02641 598 aaPredicted RBP21.2■□□□□ 0.98
SMPD1-205ENST00000531303 KCNA10Q16322 511 aa21.2■□□□□ 0.98
SMPD1-205ENST00000531303 RINT1Q6NUQ1 792 aa21.2■□□□□ 0.98
SMPD1-205ENST00000531303 CXCL17Q6UXB2 119 aa21.2■□□□□ 0.98
SMPD1-205ENST00000531303 MAEAQ7L5Y9 396 aa21.2■□□□□ 0.98
SMPD1-205ENST00000531303 RNF180Q86T96 592 aa21.2■□□□□ 0.98
SMPD1-205ENST00000531303 BBXQ8WY36 941 aaPredicted RBP21.2■□□□□ 0.98
SMPD1-205ENST00000531303 DDX12PQ92771 950 aa21.2■□□□□ 0.98
SMPD1-205ENST00000531303 CYP26B1Q9NR63 512 aa21.2■□□□□ 0.98
SMPD1-205ENST00000531303 IGBP1P78318 339 aa21.19■□□□□ 0.98
SMPD1-205ENST00000531303 ASIC1P78348 528 aa21.19■□□□□ 0.98
SMPD1-205ENST00000531303 PURAQ00577 322 aaKnown RBP21.19■□□□□ 0.98
SMPD1-205ENST00000531303 LRRC41Q15345 812 aa21.19■□□□□ 0.98
SMPD1-205ENST00000531303 KIAA0753Q2KHM9 967 aa21.19■□□□□ 0.98
SMPD1-205ENST00000531303 ARSHQ5FYA8 562 aa21.19■□□□□ 0.98
SMPD1-205ENST00000531303 KLHDC9Q8NEP7 349 aa21.19■□□□□ 0.98
SMPD1-205ENST00000531303 KAT2BQ92831 832 aa21.19■□□□□ 0.98
SMPD1-205ENST00000531303 C7orf25Q9BPX7 421 aa21.19■□□□□ 0.98
SMPD1-205ENST00000531303 NIFKQ9BYG3 293 aaKnown RBP21.19■□□□□ 0.98
SMPD1-205ENST00000531303 TRIM9Q9C026 710 aa21.19■□□□□ 0.98
SMPD1-205ENST00000531303 LRRC27Q9C0I9 530 aa21.19■□□□□ 0.98
SMPD1-205ENST00000531303 PCDHA5Q9Y5H7 936 aa21.19■□□□□ 0.98
SMPD1-205ENST00000531303 HBP1O60381 514 aa21.18■□□□□ 0.98
SMPD1-205ENST00000531303 KPNA6O60684 536 aa21.18■□□□□ 0.98
SMPD1-205ENST00000531303 F2P00734 622 aa21.18■□□□□ 0.98
SMPD1-205ENST00000531303 PSEN2P49810 448 aa21.18■□□□□ 0.98
SMPD1-205ENST00000531303 DPYDQ12882 1025 aa21.18■□□□□ 0.98
SMPD1-205ENST00000531303 MFSD10Q14728 455 aa21.18■□□□□ 0.98
SMPD1-205ENST00000531303 ZSCAN23Q3MJ62 389 aa21.18■□□□□ 0.98
SMPD1-205ENST00000531303 ISM2Q6H9L7 571 aa21.18■□□□□ 0.98
SMPD1-205ENST00000531303 C1orf186Q6ZWK4 172 aa21.18■□□□□ 0.98
SMPD1-205ENST00000531303 ELOA2Q8IYF1 753 aaPredicted RBP21.18■□□□□ 0.98
SMPD1-205ENST00000531303 TRAPPC12Q8WVT3 735 aa21.18■□□□□ 0.98
SMPD1-205ENST00000531303 ZHX3Q9H4I2 956 aa21.18■□□□□ 0.98
SMPD1-205ENST00000531303 SYCE3A1L190 88 aa21.17■□□□□ 0.98
SMPD1-205ENST00000531303 BIN1O00499 593 aa21.17■□□□□ 0.98
SMPD1-205ENST00000531303 SMC2O95347 1197 aa21.17■□□□□ 0.98
SMPD1-205ENST00000531303 ASGR1P07306 291 aa21.17■□□□□ 0.98
SMPD1-205ENST00000531303 INSRRP14616 1297 aa21.17■□□□□ 0.98
SMPD1-205ENST00000531303 IDEP14735 1019 aa21.17■□□□□ 0.98
SMPD1-205ENST00000531303 NKX3-2P78367 333 aa21.17■□□□□ 0.98
SMPD1-205ENST00000531303 SMARCE1Q969G3 411 aa21.17■□□□□ 0.98
SMPD1-205ENST00000531303 ZNF333Q96JL9 665 aa21.17■□□□□ 0.98
SMPD1-205ENST00000531303 MTG1Q9BT17 334 aaPredicted RBP21.17■□□□□ 0.98
SMPD1-205ENST00000531303 PAK6Q9NQU5 681 aaPredicted RBP21.17■□□□□ 0.98
SMPD1-205ENST00000531303 PRDM10Q9NQV6 1147 aa21.17■□□□□ 0.98
SMPD1-205ENST00000531303 KIAA1468Q9P260 1216 aa21.17■□□□□ 0.98
SMPD1-205ENST00000531303 CST5P28325 142 aaPredicted RBP21.16■□□□□ 0.98
SMPD1-205ENST00000531303 MYH11P35749 1972 aa21.16■□□□□ 0.98
SMPD1-205ENST00000531303 PCSK9Q8NBP7 692 aaKnown RBP21.16■□□□□ 0.98
SMPD1-205ENST00000531303 VTI1AQ96AJ9 217 aa21.16■□□□□ 0.98
SMPD1-205ENST00000531303 EVPLQ92817 2033 aa21.16■□□□□ 0.98
SMPD1-205ENST00000531303 RSPH10B2B2RC85 870 aa21.15■□□□□ 0.98
SMPD1-205ENST00000531303 RPN1P04843 607 aaKnown RBP21.15■□□□□ 0.98
SMPD1-205ENST00000531303 RSPH10BP0C881 870 aa21.15■□□□□ 0.98
SMPD1-205ENST00000531303 POLGP54098 1239 aaPredicted RBP21.15■□□□□ 0.98
SMPD1-205ENST00000531303 PPFIA1Q13136 1202 aa21.15■□□□□ 0.98
SMPD1-205ENST00000531303 GIT2Q14161 759 aa21.15■□□□□ 0.98
SMPD1-205ENST00000531303 TARBP2Q15633 366 aaKnown RBP21.15■□□□□ 0.98
SMPD1-205ENST00000531303 CCSAPQ6IQ19 270 aaPredicted RBP21.15■□□□□ 0.98
SMPD1-205ENST00000531303 ARRDC4Q8NCT1 418 aa21.15■□□□□ 0.98
SMPD1-205ENST00000531303 DNAJC19Q96DA6 116 aa21.15■□□□□ 0.98
SMPD1-205ENST00000531303 ZBTB10Q96DT7 871 aa21.15■□□□□ 0.98
SMPD1-205ENST00000531303 REEP2Q9BRK0 252 aa21.15■□□□□ 0.98
SMPD1-205ENST00000531303 KATNAL1Q9BW62 490 aa21.15■□□□□ 0.98
SMPD1-205ENST00000531303 SFI1A8K8P3 1242 aa21.14■□□□□ 0.98
SMPD1-205ENST00000531303 ZBTB42B2RXF5 422 aa21.14■□□□□ 0.98
SMPD1-205ENST00000531303 LETM1O95202 739 aaPredicted RBP21.14■□□□□ 0.98
SMPD1-205ENST00000531303 MYL1P05976 194 aa21.14■□□□□ 0.98
SMPD1-205ENST00000531303 SMIM10L2AP0DMW4 78 aa21.14■□□□□ 0.98
SMPD1-205ENST00000531303 SMIM10L2BP0DMW5 78 aa21.14■□□□□ 0.98
SMPD1-205ENST00000531303 SOX10P56693 466 aa21.14■□□□□ 0.98
SMPD1-205ENST00000531303 TBC1D8BQ0IIM8 1120 aa21.14■□□□□ 0.98
SMPD1-205ENST00000531303 ZNF484Q5JVG2 852 aa21.14■□□□□ 0.98
SMPD1-205ENST00000531303 FAM102BQ5T8I3 360 aa21.14■□□□□ 0.98
SMPD1-205ENST00000531303 ARMC5Q96C12 935 aa21.14■□□□□ 0.98
SMPD1-205ENST00000531303 SETD4Q9NVD3 440 aa21.14■□□□□ 0.98
SMPD1-205ENST00000531303 TRIP12Q14669 1992 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms