RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 ODR4Q5SWX8 454 aa25.22■■□□□ 1.63
TRAPPC4-210ENST00000531290 FAM43BQ6ZT52 329 aaPredicted RBP25.22■■□□□ 1.63
TRAPPC4-210ENST00000531290 METTL13Q8N6R0 699 aa25.22■■□□□ 1.63
TRAPPC4-210ENST00000531290 CLP1Q92989 425 aaKnown RBP25.22■■□□□ 1.63
TRAPPC4-210ENST00000531290 C22orf23Q9BZE7 217 aa25.22■■□□□ 1.63
TRAPPC4-210ENST00000531290 NSUN3Q9H649 340 aaKnown RBP25.22■■□□□ 1.63
TRAPPC4-210ENST00000531290 CEP131Q9UPN4 1083 aa25.22■■□□□ 1.63
TRAPPC4-210ENST00000531290 WDR64B1ANS9 1081 aa25.21■■□□□ 1.63
TRAPPC4-210ENST00000531290 RPS6KA5O75582 802 aa25.21■■□□□ 1.63
TRAPPC4-210ENST00000531290 LEXMQ3ZCV2 418 aa25.21■■□□□ 1.63
TRAPPC4-210ENST00000531290 TCEAL5Q5H9L2 206 aa25.21■■□□□ 1.63
TRAPPC4-210ENST00000531290 LARP6Q9BRS8 491 aaKnown RBP25.21■■□□□ 1.63
TRAPPC4-210ENST00000531290 UPF3BQ9BZI7 483 aaKnown RBP25.21■■□□□ 1.63
TRAPPC4-210ENST00000531290 RC3H2Q9HBD1 1191 aaKnown RBP25.21■■□□□ 1.63
TRAPPC4-210ENST00000531290 LRFN2Q9ULH4 789 aa25.21■■□□□ 1.63
TRAPPC4-210ENST00000531290 ZBTB42B2RXF5 422 aa25.2■■□□□ 1.62
TRAPPC4-210ENST00000531290 DEXIO95424 95 aa25.2■■□□□ 1.62
TRAPPC4-210ENST00000531290 CMTR2Q8IYT2 770 aaKnown RBP25.2■■□□□ 1.62
TRAPPC4-210ENST00000531290 LENG9Q96B70 501 aa25.2■■□□□ 1.62
TRAPPC4-210ENST00000531290 FAM167AQ96KS9 214 aa25.2■■□□□ 1.62
TRAPPC4-210ENST00000531290 LMAN2LQ9H0V9 348 aa25.2■■□□□ 1.62
TRAPPC4-210ENST00000531290 CDHR5Q9HBB8 845 aa25.2■■□□□ 1.62
TRAPPC4-210ENST00000531290 PDRG1Q9NUG6 133 aa25.2■■□□□ 1.62
TRAPPC4-210ENST00000531290 PCDHA4Q9UN74 947 aa25.2■■□□□ 1.62
TRAPPC4-210ENST00000531290 NOC2LQ9Y3T9 749 aaKnown RBP25.2■■□□□ 1.62
TRAPPC4-210ENST00000531290 MICAL3Q7RTP6 2002 aa25.2■■□□□ 1.62
TRAPPC4-210ENST00000531290 GPR182O15218 404 aa25.19■■□□□ 1.62
TRAPPC4-210ENST00000531290 MSH4O15457 936 aa25.19■■□□□ 1.62
TRAPPC4-210ENST00000531290 MAGEB2O15479 319 aa25.19■■□□□ 1.62
TRAPPC4-210ENST00000531290 C22orf31O95567 290 aa25.19■■□□□ 1.62
TRAPPC4-210ENST00000531290 IBSPP21815 317 aaPredicted RBP25.19■■□□□ 1.62
TRAPPC4-210ENST00000531290 STK3Q13188 491 aa25.19■■□□□ 1.62
TRAPPC4-210ENST00000531290 EP400NLQ6ZTU2 488 aa25.19■■□□□ 1.62
TRAPPC4-210ENST00000531290 TBCKQ8TEA7 893 aa25.19■■□□□ 1.62
TRAPPC4-210ENST00000531290 RIT2Q99578 217 aa25.19■■□□□ 1.62
TRAPPC4-210ENST00000531290 PLVAPQ9BX97 442 aa25.19■■□□□ 1.62
TRAPPC4-210ENST00000531290 TMX1Q9H3N1 280 aa25.19■■□□□ 1.62
TRAPPC4-210ENST00000531290 DISC1Q9NRI5 854 aa25.19■■□□□ 1.62
TRAPPC4-210ENST00000531290 NRBP2Q9NSY0 501 aa25.19■■□□□ 1.62
TRAPPC4-210ENST00000531290 RNF216Q9NWF9 866 aaPredicted RBP25.19■■□□□ 1.62
TRAPPC4-210ENST00000531290 COL4A6Q14031 1691 aa25.19■■□□□ 1.62
TRAPPC4-210ENST00000531290 DENND3A2RUS2 1198 aa25.18■■□□□ 1.62
TRAPPC4-210ENST00000531290 GRM6O15303 877 aa25.18■■□□□ 1.62
TRAPPC4-210ENST00000531290 GAS7O60861 476 aa25.18■■□□□ 1.62
TRAPPC4-210ENST00000531290 LINC00271P0C7V0 271 aa25.18■■□□□ 1.62
TRAPPC4-210ENST00000531290 CRYBB1P53674 252 aaPredicted RBP25.18■■□□□ 1.62
TRAPPC4-210ENST00000531290 KIZQ2M2Z5 673 aa25.18■■□□□ 1.62
TRAPPC4-210ENST00000531290 CRIPAKQ8N1N5 446 aa25.18■■□□□ 1.62
TRAPPC4-210ENST00000531290 ERVK-5Q9HDB9 667 aa25.18■■□□□ 1.62
TRAPPC4-210ENST00000531290 ST3GAL5Q9UNP4 418 aa25.18■■□□□ 1.62
TRAPPC4-210ENST00000531290 PCDHB7Q9Y5E2 793 aa25.18■■□□□ 1.62
TRAPPC4-210ENST00000531290 COL4A4P53420 1690 aaPredicted RBP25.17■■□□□ 1.62
TRAPPC4-210ENST00000531290 NCK2O43639 380 aa25.17■■□□□ 1.62
TRAPPC4-210ENST00000531290 TMOD1P28289 359 aa25.17■■□□□ 1.62
TRAPPC4-210ENST00000531290 SARSP49591 514 aaKnown RBP25.17■■□□□ 1.62
TRAPPC4-210ENST00000531290 PUS10Q3MIT2 529 aaKnown RBP25.17■■□□□ 1.62
TRAPPC4-210ENST00000531290 PAN2Q504Q3 1202 aaKnown RBP25.17■■□□□ 1.62
TRAPPC4-210ENST00000531290 LRCH2Q5VUJ6 765 aa25.17■■□□□ 1.62
TRAPPC4-210ENST00000531290 BLIDQ8IZY5 108 aa25.17■■□□□ 1.62
TRAPPC4-210ENST00000531290 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.17■■□□□ 1.62
TRAPPC4-210ENST00000531290 PABPC5Q96DU9 382 aaKnown RBP25.17■■□□□ 1.62
TRAPPC4-210ENST00000531290 PPP1R16BQ96T49 567 aa25.17■■□□□ 1.62
TRAPPC4-210ENST00000531290 TEKT3Q9BXF9 490 aa25.17■■□□□ 1.62
TRAPPC4-210ENST00000531290 MRPL42Q9Y6G3 142 aaKnown RBP25.17■■□□□ 1.62
TRAPPC4-210ENST00000531290 CHMP2AO43633 222 aa25.16■■□□□ 1.62
TRAPPC4-210ENST00000531290 EDIL3O43854 480 aa25.16■■□□□ 1.62
TRAPPC4-210ENST00000531290 VTNP04004 478 aa25.16■■□□□ 1.62
TRAPPC4-210ENST00000531290 SFNP31947 248 aa25.16■■□□□ 1.62
TRAPPC4-210ENST00000531290 GALNT17Q6IS24 598 aa25.16■■□□□ 1.62
TRAPPC4-210ENST00000531290 PTCRAQ6ISU1 281 aaPredicted RBP25.16■■□□□ 1.62
TRAPPC4-210ENST00000531290 TMEM40Q8WWA1 233 aa25.16■■□□□ 1.62
TRAPPC4-210ENST00000531290 KAT6AQ92794 2004 aa25.16■■□□□ 1.62
TRAPPC4-210ENST00000531290 SLC5A5Q92911 643 aa25.16■■□□□ 1.62
TRAPPC4-210ENST00000531290 OSMRQ99650 979 aa25.16■■□□□ 1.62
TRAPPC4-210ENST00000531290 ADAM2Q99965 735 aa25.16■■□□□ 1.62
TRAPPC4-210ENST00000531290 C1QTNF1Q9BXJ1 281 aa25.16■■□□□ 1.62
TRAPPC4-210ENST00000531290 C1orf112Q9NSG2 853 aa25.16■■□□□ 1.62
TRAPPC4-210ENST00000531290 OATP04181 439 aa25.15■■□□□ 1.62
TRAPPC4-210ENST00000531290 JAK3P52333 1124 aa25.15■■□□□ 1.62
TRAPPC4-210ENST00000531290 Q4G0T1 1027 aa25.15■■□□□ 1.62
TRAPPC4-210ENST00000531290 NAALADL2Q58DX5 795 aa25.15■■□□□ 1.62
TRAPPC4-210ENST00000531290 EFCAB12Q6NXP0 572 aa25.15■■□□□ 1.62
TRAPPC4-210ENST00000531290 SLC24A5Q71RS6 500 aa25.15■■□□□ 1.62
TRAPPC4-210ENST00000531290 FAM177A1Q8N128 213 aaPredicted RBP25.15■■□□□ 1.62
TRAPPC4-210ENST00000531290 NEK9Q8TD19 979 aa25.15■■□□□ 1.62
TRAPPC4-210ENST00000531290 P2RX5Q93086 422 aa25.15■■□□□ 1.62
TRAPPC4-210ENST00000531290 MAP7D2Q96T17 732 aa25.15■■□□□ 1.62
TRAPPC4-210ENST00000531290 ALG13Q9NP73 1137 aaKnown RBP25.15■■□□□ 1.62
TRAPPC4-210ENST00000531290 RGS18Q9NS28 235 aa25.15■■□□□ 1.62
TRAPPC4-210ENST00000531290 PLAGL2Q9UPG8 496 aa25.15■■□□□ 1.62
TRAPPC4-210ENST00000531290 AKT3Q9Y243 479 aa25.15■■□□□ 1.62
TRAPPC4-210ENST00000531290 H3BQ06 376 aaPredicted RBP25.14■■□□□ 1.62
TRAPPC4-210ENST00000531290 MGEA5O60502 916 aa25.14■■□□□ 1.62
TRAPPC4-210ENST00000531290 CDKL5O76039 1030 aa25.14■■□□□ 1.62
TRAPPC4-210ENST00000531290 CLCN3P51790 818 aa25.14■■□□□ 1.62
TRAPPC4-210ENST00000531290 ZNF710Q8N1W2 664 aa25.14■■□□□ 1.62
TRAPPC4-210ENST00000531290 UNC45AQ9H3U1 944 aa25.14■■□□□ 1.62
TRAPPC4-210ENST00000531290 CLDND1Q9NY35 253 aa25.14■■□□□ 1.62
TRAPPC4-210ENST00000531290 CYP3A7-CYP3A51PA0A087WV96 503 aa25.13■■□□□ 1.61
TRAPPC4-210ENST00000531290 ZNF862O60290 1169 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms