RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 CYP26B1Q9NR63 512 aa18.91■□□□□ 0.62
SF3B2-211ENST00000531041 SETD4Q9NVD3 440 aa18.91■□□□□ 0.62
SF3B2-211ENST00000531041 DNM3Q9UQ16 869 aa18.91■□□□□ 0.62
SF3B2-211ENST00000531041 PPME1Q9Y570 386 aa18.91■□□□□ 0.62
SF3B2-211ENST00000531041 FAM237AA0A1B0GTK4 181 aa18.9■□□□□ 0.62
SF3B2-211ENST00000531041 C17orf102A2RUQ5 167 aa18.9■□□□□ 0.62
SF3B2-211ENST00000531041 TMEM150BA6NC51 233 aa18.9■□□□□ 0.62
SF3B2-211ENST00000531041 GOLGA6L4A6NEF3 574 aa18.9■□□□□ 0.62
SF3B2-211ENST00000531041 PLCG1P19174 1290 aa18.9■□□□□ 0.62
SF3B2-211ENST00000531041 ATN1P54259 1190 aaPredicted RBP18.9■□□□□ 0.62
SF3B2-211ENST00000531041 HIC1Q14526 733 aa18.9■□□□□ 0.62
SF3B2-211ENST00000531041 PLA2G4FQ68DD2 849 aa18.9■□□□□ 0.62
SF3B2-211ENST00000531041 GDF6Q6KF10 455 aaPredicted RBP18.9■□□□□ 0.62
SF3B2-211ENST00000531041 CCDC73Q6ZRK6 1079 aa18.9■□□□□ 0.62
SF3B2-211ENST00000531041 ANKRD33Q7Z3H0 272 aa18.9■□□□□ 0.62
SF3B2-211ENST00000531041 KCNK18Q7Z418 384 aa18.9■□□□□ 0.62
SF3B2-211ENST00000531041 CEP89Q96ST8 783 aa18.9■□□□□ 0.62
SF3B2-211ENST00000531041 PLIN2Q99541 437 aa18.9■□□□□ 0.62
SF3B2-211ENST00000531041 A0A087WWV3 80 aa18.89■□□□□ 0.61
SF3B2-211ENST00000531041 A0A087X0B3 334 aa18.89■□□□□ 0.61
SF3B2-211ENST00000531041 MBLAC1A4D2B0 266 aaPredicted RBP18.89■□□□□ 0.61
SF3B2-211ENST00000531041 E9PMD0 336 aa18.89■□□□□ 0.61
SF3B2-211ENST00000531041 EYA4O95677 639 aa18.89■□□□□ 0.61
SF3B2-211ENST00000531041 RARRES1P49788 294 aa18.89■□□□□ 0.61
SF3B2-211ENST00000531041 NPEPPSP55786 919 aa18.89■□□□□ 0.61
SF3B2-211ENST00000531041 MTERF2Q49AM1 385 aa18.89■□□□□ 0.61
SF3B2-211ENST00000531041 XKR9Q5GH70 373 aa18.89■□□□□ 0.61
SF3B2-211ENST00000531041 MARCH8Q5T0T0 291 aa18.89■□□□□ 0.61
SF3B2-211ENST00000531041 RRAGBQ5VZM2 374 aa18.89■□□□□ 0.61
SF3B2-211ENST00000531041 CEP170P1Q96L14 293 aa18.89■□□□□ 0.61
SF3B2-211ENST00000531041 STK17AQ9UEE5 414 aa18.89■□□□□ 0.61
SF3B2-211ENST00000531041 HPSEQ9Y251 543 aa18.89■□□□□ 0.61
SF3B2-211ENST00000531041 A0A1B0GVL5 298 aa18.88■□□□□ 0.61
SF3B2-211ENST00000531041 IGBP1P78318 339 aa18.88■□□□□ 0.61
SF3B2-211ENST00000531041 LRRC26Q2I0M4 334 aa18.88■□□□□ 0.61
SF3B2-211ENST00000531041 FAM126BQ8IXS8 530 aa18.88■□□□□ 0.61
SF3B2-211ENST00000531041 PDILTQ8N807 584 aa18.88■□□□□ 0.61
SF3B2-211ENST00000531041 LRRC15Q8TF66 581 aa18.88■□□□□ 0.61
SF3B2-211ENST00000531041 TRAPPC12Q8WVT3 735 aa18.88■□□□□ 0.61
SF3B2-211ENST00000531041 MRPS27Q92552 414 aaKnown RBP18.88■□□□□ 0.61
SF3B2-211ENST00000531041 TOX2Q96NM4 488 aa18.88■□□□□ 0.61
SF3B2-211ENST00000531041 SH2D3AQ9BRG2 576 aa18.88■□□□□ 0.61
SF3B2-211ENST00000531041 PYM1Q9BRP8 204 aaKnown RBP18.88■□□□□ 0.61
SF3B2-211ENST00000531041 PANK2Q9BZ23 570 aa18.88■□□□□ 0.61
SF3B2-211ENST00000531041 BHMT2Q9H2M3 363 aa18.88■□□□□ 0.61
SF3B2-211ENST00000531041 BLOC1S4Q9NUP1 217 aa18.88■□□□□ 0.61
SF3B2-211ENST00000531041 TUBE1Q9UJT0 475 aa18.88■□□□□ 0.61
SF3B2-211ENST00000531041 KCNH3Q9ULD8 1083 aa18.88■□□□□ 0.61
SF3B2-211ENST00000531041 MAGEB2O15479 319 aa18.87■□□□□ 0.61
SF3B2-211ENST00000531041 TREHO43280 583 aa18.87■□□□□ 0.61
SF3B2-211ENST00000531041 B4GALT4O60513 344 aa18.87■□□□□ 0.61
SF3B2-211ENST00000531041 CD4P01730 458 aa18.87■□□□□ 0.61
SF3B2-211ENST00000531041 PFKFB1P16118 471 aa18.87■□□□□ 0.61
SF3B2-211ENST00000531041 KLRC1P26715 233 aa18.87■□□□□ 0.61
SF3B2-211ENST00000531041 ZNF200P98182 395 aaPredicted RBP18.87■□□□□ 0.61
SF3B2-211ENST00000531041 PTGISQ16647 500 aa18.87■□□□□ 0.61
SF3B2-211ENST00000531041 NAALADL2Q58DX5 795 aa18.87■□□□□ 0.61
SF3B2-211ENST00000531041 MTHFD1LQ6UB35 978 aa18.87■□□□□ 0.61
SF3B2-211ENST00000531041 EXOC8Q8IYI6 725 aa18.87■□□□□ 0.61
SF3B2-211ENST00000531041 FSIP1Q8NA03 581 aa18.87■□□□□ 0.61
SF3B2-211ENST00000531041 CCDC43Q96MW1 224 aaKnown RBP18.87■□□□□ 0.61
SF3B2-211ENST00000531041 CTAGE1Q96RT6 745 aa18.87■□□□□ 0.61
SF3B2-211ENST00000531041 DHX33Q9H6R0 707 aaKnown RBP18.87■□□□□ 0.61
SF3B2-211ENST00000531041 ARHGEF35A5YM69 484 aa18.86■□□□□ 0.61
SF3B2-211ENST00000531041 POLR2DO15514 142 aaKnown RBP18.86■□□□□ 0.61
SF3B2-211ENST00000531041 GADD45BO75293 160 aaPredicted RBP18.86■□□□□ 0.61
SF3B2-211ENST00000531041 PRPF40AO75400 957 aaKnown RBP18.86■□□□□ 0.61
SF3B2-211ENST00000531041 C22orf31O95567 290 aa18.86■□□□□ 0.61
SF3B2-211ENST00000531041 RFC5P40937 340 aa18.86■□□□□ 0.61
SF3B2-211ENST00000531041 STAT6P42226 847 aa18.86■□□□□ 0.61
SF3B2-211ENST00000531041 RTP1P59025 263 aa18.86■□□□□ 0.61
SF3B2-211ENST00000531041 TBC1D8BQ0IIM8 1120 aa18.86■□□□□ 0.61
SF3B2-211ENST00000531041 E2F4Q16254 413 aa18.86■□□□□ 0.61
SF3B2-211ENST00000531041 TRIM60Q495X7 471 aa18.86■□□□□ 0.61
SF3B2-211ENST00000531041 SYT2Q8N9I0 419 aaPredicted RBP18.86■□□□□ 0.61
SF3B2-211ENST00000531041 IQUBQ8NA54 791 aa18.86■□□□□ 0.61
SF3B2-211ENST00000531041 LARP4BQ92615 738 aaKnown RBP18.86■□□□□ 0.61
SF3B2-211ENST00000531041 RAD54LQ92698 747 aa18.86■□□□□ 0.61
SF3B2-211ENST00000531041 TRPV6Q9H1D0 765 aa18.86■□□□□ 0.61
SF3B2-211ENST00000531041 CUEDC2Q9H467 287 aa18.86■□□□□ 0.61
SF3B2-211ENST00000531041 TRMT13Q9NUP7 481 aaKnown RBP18.86■□□□□ 0.61
SF3B2-211ENST00000531041 PCDHA2Q9Y5H9 948 aa18.86■□□□□ 0.61
SF3B2-211ENST00000531041 MKI67P46013 3256 aaKnown RBP18.86■□□□□ 0.61
SF3B2-211ENST00000531041 SIP14410 1827 aa18.85■□□□□ 0.61
SF3B2-211ENST00000531041 IGKV6-21A0A0C4DH24 114 aa18.85■□□□□ 0.61
SF3B2-211ENST00000531041 DCDC2CA8MYV0 355 aa18.85■□□□□ 0.61
SF3B2-211ENST00000531041 TLR3O15455 904 aaKnown RBP18.85■□□□□ 0.61
SF3B2-211ENST00000531041 PQBP1O60828 265 aaKnown RBP18.85■□□□□ 0.61
SF3B2-211ENST00000531041 MAFO75444 373 aaPredicted RBP18.85■□□□□ 0.61
SF3B2-211ENST00000531041 DGAT1O75907 488 aa18.85■□□□□ 0.61
SF3B2-211ENST00000531041 PLA2G4BP0C869 781 aa18.85■□□□□ 0.61
SF3B2-211ENST00000531041 NDUFA8P51970 172 aa18.85■□□□□ 0.61
SF3B2-211ENST00000531041 SLC12A3P55017 1021 aa18.85■□□□□ 0.61
SF3B2-211ENST00000531041 UBE2HP62256 183 aa18.85■□□□□ 0.61
SF3B2-211ENST00000531041 TLE2Q04725 743 aa18.85■□□□□ 0.61
SF3B2-211ENST00000531041 TPRNQ4KMQ1 711 aa18.85■□□□□ 0.61
SF3B2-211ENST00000531041 SERINC5Q86VE9 423 aa18.85■□□□□ 0.61
SF3B2-211ENST00000531041 JPH2Q9BR39 696 aaPredicted RBP18.85■□□□□ 0.61
SF3B2-211ENST00000531041 GOLPH3LQ9H4A5 285 aa18.85■□□□□ 0.61
SF3B2-211ENST00000531041 PDLIM7Q9NR12 457 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms