RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 TMX1Q9H3N1 280 aa11.95□□□□□ -0.5
COPB1-207ENST00000529866 ATP6V0A4Q9HBG4 840 aa11.95□□□□□ -0.5
COPB1-207ENST00000529866 PKD2L1Q9P0L9 805 aa11.95□□□□□ -0.5
COPB1-207ENST00000529866 GINS2Q9Y248 185 aa11.95□□□□□ -0.5
COPB1-207ENST00000529866 NCOR2Q9Y618 2525 aa11.94□□□□□ -0.5
COPB1-207ENST00000529866 C2CD4DB7Z1M9 353 aa11.94□□□□□ -0.5
COPB1-207ENST00000529866 MEIS2O14770 477 aa11.94□□□□□ -0.5
COPB1-207ENST00000529866 GPR182O15218 404 aa11.94□□□□□ -0.5
COPB1-207ENST00000529866 HOXA2O43364 376 aa11.94□□□□□ -0.5
COPB1-207ENST00000529866 RPS6KA5O75582 802 aa11.94□□□□□ -0.5
COPB1-207ENST00000529866 ITGB5P18084 799 aa11.94□□□□□ -0.5
COPB1-207ENST00000529866 PLCB3Q01970 1234 aa11.94□□□□□ -0.5
COPB1-207ENST00000529866 KRT17Q04695 432 aa11.94□□□□□ -0.5
COPB1-207ENST00000529866 TROAPQ12815 778 aa11.94□□□□□ -0.5
COPB1-207ENST00000529866 WTAPQ15007 396 aa11.94□□□□□ -0.5
COPB1-207ENST00000529866 TMEM266Q2M3C6 531 aa11.94□□□□□ -0.5
COPB1-207ENST00000529866 CYB5R4Q7L1T6 521 aa11.94□□□□□ -0.5
COPB1-207ENST00000529866 TMC7Q7Z402 723 aa11.94□□□□□ -0.5
COPB1-207ENST00000529866 FRMD5Q7Z6J6 570 aa11.94□□□□□ -0.5
COPB1-207ENST00000529866 TDRD5Q8NAT2 981 aaKnown RBP11.94□□□□□ -0.5
COPB1-207ENST00000529866 ADAM2Q99965 735 aa11.94□□□□□ -0.5
COPB1-207ENST00000529866 ADAM7Q9H2U9 754 aa11.94□□□□□ -0.5
COPB1-207ENST00000529866 ERVK-5Q9HDB9 667 aa11.94□□□□□ -0.5
COPB1-207ENST00000529866 TYW1Q9NV66 732 aaKnown RBP11.94□□□□□ -0.5
COPB1-207ENST00000529866 SLC9A2Q9UBY0 812 aa11.94□□□□□ -0.5
COPB1-207ENST00000529866 VPS13AQ96RL7 3174 aa11.93□□□□□ -0.5
COPB1-207ENST00000529866 SPDYE3A6NKU9 549 aa11.93□□□□□ -0.5
COPB1-207ENST00000529866 PDE4AP27815 886 aa11.93□□□□□ -0.5
COPB1-207ENST00000529866 KIF5BP33176 963 aa11.93□□□□□ -0.5
COPB1-207ENST00000529866 MTHFRP42898 656 aa11.93□□□□□ -0.5
COPB1-207ENST00000529866 SLC26A2P50443 739 aa11.93□□□□□ -0.5
COPB1-207ENST00000529866 CLCN5P51795 746 aa11.93□□□□□ -0.5
COPB1-207ENST00000529866 APOBRQ0VD83 1088 aa11.93□□□□□ -0.5
COPB1-207ENST00000529866 BMS1Q14692 1282 aaKnown RBP11.93□□□□□ -0.5
COPB1-207ENST00000529866 FAM102BQ5T8I3 360 aa11.93□□□□□ -0.5
COPB1-207ENST00000529866 PLPPR4Q7Z2D5 763 aa11.93□□□□□ -0.5
COPB1-207ENST00000529866 RALYLQ86SE5 291 aaKnown RBP11.93□□□□□ -0.5
COPB1-207ENST00000529866 LRRC43Q8N309 656 aa11.93□□□□□ -0.5
COPB1-207ENST00000529866 CTCFLQ8NI51 663 aaPredicted RBP11.93□□□□□ -0.5
COPB1-207ENST00000529866 SDF4Q9BRK5 362 aa11.93□□□□□ -0.5
COPB1-207ENST00000529866 SPZ1Q9BXG8 430 aa11.93□□□□□ -0.5
COPB1-207ENST00000529866 RWDD1Q9H446 243 aaPredicted RBP11.93□□□□□ -0.5
COPB1-207ENST00000529866 OSBPL3Q9H4L5 887 aa11.93□□□□□ -0.5
COPB1-207ENST00000529866 PSTPIP2Q9H939 334 aa11.93□□□□□ -0.5
COPB1-207ENST00000529866 JADE2Q9NQC1 790 aa11.93□□□□□ -0.5
COPB1-207ENST00000529866 RGS18Q9NS28 235 aa11.93□□□□□ -0.5
COPB1-207ENST00000529866 TMEM161AQ9NX61 479 aa11.93□□□□□ -0.5
COPB1-207ENST00000529866 UBIAD1Q9Y5Z9 338 aa11.93□□□□□ -0.5
COPB1-207ENST00000529866 MYH6P13533 1939 aa11.93□□□□□ -0.5
COPB1-207ENST00000529866 EPG5Q9HCE0 2579 aa11.93□□□□□ -0.5
COPB1-207ENST00000529866 HIDE1A8MVS5 230 aa11.92□□□□□ -0.5
COPB1-207ENST00000529866 C9IYK1 514 aa11.92□□□□□ -0.5
COPB1-207ENST00000529866 MGEA5O60502 916 aa11.92□□□□□ -0.5
COPB1-207ENST00000529866 FGFR1P11362 822 aa11.92□□□□□ -0.5
COPB1-207ENST00000529866 STAT5BP51692 787 aa11.92□□□□□ -0.5
COPB1-207ENST00000529866 SMC1AQ14683 1233 aaKnown RBP11.92□□□□□ -0.5
COPB1-207ENST00000529866 PLCB4Q15147 1175 aa11.92□□□□□ -0.5
COPB1-207ENST00000529866 MTHFD1LQ6UB35 978 aa11.92□□□□□ -0.5
COPB1-207ENST00000529866 ABI1Q8IZP0 508 aa11.92□□□□□ -0.5
COPB1-207ENST00000529866 PLCD3Q8N3E9 789 aa11.92□□□□□ -0.5
COPB1-207ENST00000529866 TRAPPC12Q8WVT3 735 aa11.92□□□□□ -0.5
COPB1-207ENST00000529866 ZNF558Q96NG5 402 aa11.92□□□□□ -0.5
COPB1-207ENST00000529866 PCYT2Q99447 389 aa11.92□□□□□ -0.5
COPB1-207ENST00000529866 TMEM117Q9H0C3 514 aa11.92□□□□□ -0.5
COPB1-207ENST00000529866 POMKQ9H5K3 350 aa11.92□□□□□ -0.5
COPB1-207ENST00000529866 ELAC1Q9H777 363 aaKnown RBP11.92□□□□□ -0.5
COPB1-207ENST00000529866 HCSTQ9UBK5 93 aa11.92□□□□□ -0.5
COPB1-207ENST00000529866 HCFC2Q9Y5Z7 792 aa11.92□□□□□ -0.5
COPB1-207ENST00000529866 U3KPZ7 1027 aaPredicted RBP11.92□□□□□ -0.5
COPB1-207ENST00000529866 DCHS1Q96JQ0 3298 aa11.92□□□□□ -0.5
COPB1-207ENST00000529866 CACNA1BQ00975 2339 aa11.92□□□□□ -0.5
COPB1-207ENST00000529866 TPRP12270 2363 aaKnown RBP11.91□□□□□ -0.5
COPB1-207ENST00000529866 GSPT1P15170 499 aaKnown RBP11.91□□□□□ -0.5
COPB1-207ENST00000529866 GNAQP50148 359 aa11.91□□□□□ -0.5
COPB1-207ENST00000529866 ACTR2P61160 394 aa11.91□□□□□ -0.5
COPB1-207ENST00000529866 IRX6P78412 446 aaPredicted RBP11.91□□□□□ -0.5
COPB1-207ENST00000529866 AAMPQ13685 434 aa11.91□□□□□ -0.5
COPB1-207ENST00000529866 KCNT2Q6UVM3 1135 aa11.91□□□□□ -0.5
COPB1-207ENST00000529866 ZDHHC14Q8IZN3 488 aa11.91□□□□□ -0.5
COPB1-207ENST00000529866 TMEM87AQ8NBN3 555 aa11.91□□□□□ -0.5
COPB1-207ENST00000529866 FLCNQ8NFG4 579 aa11.91□□□□□ -0.5
COPB1-207ENST00000529866 MAP3K14Q99558 947 aa11.91□□□□□ -0.5
COPB1-207ENST00000529866 LZTS2Q9BRK4 669 aa11.91□□□□□ -0.5
COPB1-207ENST00000529866 CWH43Q9H720 699 aa11.91□□□□□ -0.5
COPB1-207ENST00000529866 DZANK1Q9NVP4 752 aa11.91□□□□□ -0.5
COPB1-207ENST00000529866 DBR1Q9UK59 544 aaKnown RBP11.91□□□□□ -0.5
COPB1-207ENST00000529866 ST3GAL5Q9UNP4 418 aa11.91□□□□□ -0.5
COPB1-207ENST00000529866 USTQ9Y2C2 406 aa11.91□□□□□ -0.5
COPB1-207ENST00000529866 NOC2LQ9Y3T9 749 aaKnown RBP11.91□□□□□ -0.5
COPB1-207ENST00000529866 NFASCO94856 1347 aa11.9□□□□□ -0.5
COPB1-207ENST00000529866 HBP1O60381 514 aa11.9□□□□□ -0.5
COPB1-207ENST00000529866 DDAH1O94760 285 aa11.9□□□□□ -0.5
COPB1-207ENST00000529866 ASGR2P07307 311 aa11.9□□□□□ -0.5
COPB1-207ENST00000529866 KLRC1P26715 233 aa11.9□□□□□ -0.5
COPB1-207ENST00000529866 SMARCA1P28370 1054 aa11.9□□□□□ -0.5
COPB1-207ENST00000529866 CA8P35219 290 aa11.9□□□□□ -0.5
COPB1-207ENST00000529866 ATAT1Q5SQI0 421 aa11.9□□□□□ -0.5
COPB1-207ENST00000529866 FAM160B1Q5W0V3 765 aa11.9□□□□□ -0.5
COPB1-207ENST00000529866 KIAA1841Q6NSI8 718 aa11.9□□□□□ -0.5
COPB1-207ENST00000529866 NCOA7Q8NI08 942 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms