RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 ZBTB10Q96DT7 871 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 AK8Q96MA6 479 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 CTAGE1Q96RT6 745 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 SH2D3AQ9BRG2 576 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 NRBP2Q9NSY0 501 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 SEPT9Q9UHD8 586 aaPredicted RBP15.68■□□□□ 0.1
USF1-209ENST00000529476 NRCAMQ92823 1304 aa15.68■□□□□ 0.1
USF1-209ENST00000529476 DCDC2CA8MYV0 355 aa15.67■□□□□ 0.1
USF1-209ENST00000529476 ZBTB42B2RXF5 422 aa15.67■□□□□ 0.1
USF1-209ENST00000529476 TREHO43280 583 aa15.67■□□□□ 0.1
USF1-209ENST00000529476 LYPLA2O95372 231 aa15.67■□□□□ 0.1
USF1-209ENST00000529476 CD4P01730 458 aa15.67■□□□□ 0.1
USF1-209ENST00000529476 ADAM17P78536 824 aa15.67■□□□□ 0.1
USF1-209ENST00000529476 FAAP100Q0VG06 881 aa15.67■□□□□ 0.1
USF1-209ENST00000529476 ZRSR1Q15695 479 aaKnown RBP15.67■□□□□ 0.1
USF1-209ENST00000529476 MARCH8Q5T0T0 291 aa15.67■□□□□ 0.1
USF1-209ENST00000529476 POTEGQ6S5H5 508 aa15.67■□□□□ 0.1
USF1-209ENST00000529476 USP49Q70CQ1 688 aa15.67■□□□□ 0.1
USF1-209ENST00000529476 CABP7Q86V35 215 aa15.67■□□□□ 0.1
USF1-209ENST00000529476 TNPO1Q92973 898 aaKnown RBP15.67■□□□□ 0.1
USF1-209ENST00000529476 EPSTI1Q96J88 318 aa15.67■□□□□ 0.1
USF1-209ENST00000529476 SPATA32Q96LK8 384 aa15.67■□□□□ 0.1
USF1-209ENST00000529476 TOX2Q96NM4 488 aa15.67■□□□□ 0.1
USF1-209ENST00000529476 GUCD1Q96NT3 240 aa15.67■□□□□ 0.1
USF1-209ENST00000529476 NIFKQ9BYG3 293 aaKnown RBP15.67■□□□□ 0.1
USF1-209ENST00000529476 PCDHA7Q9UN72 937 aa15.67■□□□□ 0.1
USF1-209ENST00000529476 STK24Q9Y6E0 443 aa15.67■□□□□ 0.1
USF1-209ENST00000529476 DNAH12Q6ZR08 3092 aa15.66■□□□□ 0.1
USF1-209ENST00000529476 COL1A2P08123 1366 aa15.66■□□□□ 0.1
USF1-209ENST00000529476 RRN3P2A6NIE6 340 aa15.66■□□□□ 0.1
USF1-209ENST00000529476 TLR3O15455 904 aaKnown RBP15.66■□□□□ 0.1
USF1-209ENST00000529476 GNAT1P11488 350 aa15.66■□□□□ 0.1
USF1-209ENST00000529476 CYP2C9P11712 490 aa15.66■□□□□ 0.1
USF1-209ENST00000529476 YWHABP31946 246 aaKnown RBP15.66■□□□□ 0.1
USF1-209ENST00000529476 ME1P48163 572 aa15.66■□□□□ 0.1
USF1-209ENST00000529476 NPEPPSP55786 919 aa15.66■□□□□ 0.1
USF1-209ENST00000529476 TARBP2Q15633 366 aaKnown RBP15.66■□□□□ 0.1
USF1-209ENST00000529476 MTERF2Q49AM1 385 aa15.66■□□□□ 0.1
USF1-209ENST00000529476 ZNF484Q5JVG2 852 aa15.66■□□□□ 0.1
USF1-209ENST00000529476 AXDND1Q5T1B0 1012 aaPredicted RBP15.66■□□□□ 0.1
USF1-209ENST00000529476 ZNF579Q8NAF0 562 aaKnown RBP15.66■□□□□ 0.1
USF1-209ENST00000529476 PIGOQ8TEQ8 1089 aa15.66■□□□□ 0.1
USF1-209ENST00000529476 SYMPKQ92797 1274 aaKnown RBP15.66■□□□□ 0.1
USF1-209ENST00000529476 PNMA5Q96PV4 448 aa15.66■□□□□ 0.1
USF1-209ENST00000529476 PLIN2Q99541 437 aa15.66■□□□□ 0.1
USF1-209ENST00000529476 UBE2OQ9C0C9 1292 aaKnown RBP15.66■□□□□ 0.1
USF1-209ENST00000529476 SCAND2PQ9GZW5 306 aaPredicted RBP15.66■□□□□ 0.1
USF1-209ENST00000529476 GDPD2Q9HCC8 539 aa15.66■□□□□ 0.1
USF1-209ENST00000529476 PRDM6Q9NQX0 595 aa15.66■□□□□ 0.1
USF1-209ENST00000529476 TUBE1Q9UJT0 475 aa15.66■□□□□ 0.1
USF1-209ENST00000529476 KIAA1024Q9UPX6 916 aa15.66■□□□□ 0.1
USF1-209ENST00000529476 NOD1Q9Y239 953 aa15.66■□□□□ 0.1
USF1-209ENST00000529476 EVPLQ92817 2033 aa15.66■□□□□ 0.1
USF1-209ENST00000529476 VCANP13611 3396 aa15.65■□□□□ 0.1
USF1-209ENST00000529476 MBLAC1A4D2B0 266 aaPredicted RBP15.65■□□□□ 0.1
USF1-209ENST00000529476 CUTAO60888 179 aa15.65■□□□□ 0.1
USF1-209ENST00000529476 CLTBP09497 229 aa15.65■□□□□ 0.1
USF1-209ENST00000529476 MUTP22033 750 aa15.65■□□□□ 0.1
USF1-209ENST00000529476 KLRC1P26715 233 aa15.65■□□□□ 0.1
USF1-209ENST00000529476 UBA7P41226 1012 aa15.65■□□□□ 0.1
USF1-209ENST00000529476 GRB10Q13322 594 aa15.65■□□□□ 0.1
USF1-209ENST00000529476 MTHFD1LQ6UB35 978 aa15.65■□□□□ 0.1
USF1-209ENST00000529476 RUFY4Q6ZNE9 571 aa15.65■□□□□ 0.1
USF1-209ENST00000529476 SH3RF1Q7Z6J0 888 aa15.65■□□□□ 0.1
USF1-209ENST00000529476 DHX38Q92620 1227 aaKnown RBP15.65■□□□□ 0.1
USF1-209ENST00000529476 WNT8BQ93098 351 aa15.65■□□□□ 0.1
USF1-209ENST00000529476 CEP170P1Q96L14 293 aa15.65■□□□□ 0.1
USF1-209ENST00000529476 NACC1Q96RE7 527 aa15.65■□□□□ 0.1
USF1-209ENST00000529476 CEP89Q96ST8 783 aa15.65■□□□□ 0.1
USF1-209ENST00000529476 PDLIM7Q9NR12 457 aa15.65■□□□□ 0.1
USF1-209ENST00000529476 CYP26B1Q9NR63 512 aa15.65■□□□□ 0.1
USF1-209ENST00000529476 DDX19AQ9NUU7 478 aaKnown RBP15.65■□□□□ 0.1
USF1-209ENST00000529476 C22orf31O95567 290 aa15.64■□□□□ 0.09
USF1-209ENST00000529476 KARSQ15046 597 aaKnown RBP15.64■□□□□ 0.09
USF1-209ENST00000529476 XKR9Q5GH70 373 aa15.64■□□□□ 0.09
USF1-209ENST00000529476 HYIQ5T013 277 aa15.64■□□□□ 0.09
USF1-209ENST00000529476 SHC4Q6S5L8 630 aa15.64■□□□□ 0.09
USF1-209ENST00000529476 OTUD6AQ7L8S5 288 aa15.64■□□□□ 0.09
USF1-209ENST00000529476 KCNK18Q7Z418 384 aa15.64■□□□□ 0.09
USF1-209ENST00000529476 SERINC5Q86VE9 423 aa15.64■□□□□ 0.09
USF1-209ENST00000529476 CDK5RAP3Q96JB5 506 aa15.64■□□□□ 0.09
USF1-209ENST00000529476 CCSER1Q9C0I3 900 aa15.64■□□□□ 0.09
USF1-209ENST00000529476 PRDM5Q9NQX1 630 aaPredicted RBP15.64■□□□□ 0.09
USF1-209ENST00000529476 ANKEF1Q9NU02 776 aa15.64■□□□□ 0.09
USF1-209ENST00000529476 TMEM39AQ9NV64 488 aa15.64■□□□□ 0.09
USF1-209ENST00000529476 TBX21Q9UL17 535 aa15.64■□□□□ 0.09
USF1-209ENST00000529476 LOXHD1Q8IVV2 1947 aa15.64■□□□□ 0.09
USF1-209ENST00000529476 KDM3AQ9Y4C1 1321 aa15.64■□□□□ 0.09
USF1-209ENST00000529476 TRIM43BA6NCK2 446 aa15.63■□□□□ 0.09
USF1-209ENST00000529476 E9PMD0 336 aa15.63■□□□□ 0.09
USF1-209ENST00000529476 XRCC6P12956 609 aaKnown RBP eCLIP15.63■□□□□ 0.09
USF1-209ENST00000529476 RARRES1P49788 294 aa15.63■□□□□ 0.09
USF1-209ENST00000529476 PTK7Q13308 1070 aa15.63■□□□□ 0.09
USF1-209ENST00000529476 TMEM119Q4V9L6 283 aa15.63■□□□□ 0.09
USF1-209ENST00000529476 RASSF8Q8NHQ8 419 aa15.63■□□□□ 0.09
USF1-209ENST00000529476 TRIM43Q96BQ3 446 aaPredicted RBP15.63■□□□□ 0.09
USF1-209ENST00000529476 CALML4Q96GE6 196 aa15.63■□□□□ 0.09
USF1-209ENST00000529476 FAM161BQ96MY7 647 aa15.63■□□□□ 0.09
USF1-209ENST00000529476 DBR1Q9UK59 544 aaKnown RBP15.63■□□□□ 0.09
USF1-209ENST00000529476 PCDHA2Q9Y5H9 948 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms