RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 EFCAB14O75071 495 aa18.91■□□□□ 0.62
HIF3A-211ENST00000528563 P4HBP07237 508 aaKnown RBP18.91■□□□□ 0.62
HIF3A-211ENST00000528563 TXKP42681 527 aa18.91■□□□□ 0.62
HIF3A-211ENST00000528563 QARSP47897 775 aaKnown RBP18.91■□□□□ 0.62
HIF3A-211ENST00000528563 TOB1P50616 345 aaPredicted RBP18.91■□□□□ 0.62
HIF3A-211ENST00000528563 WDR5P61964 334 aaKnown RBP18.91■□□□□ 0.62
HIF3A-211ENST00000528563 ORC2Q13416 577 aaPredicted RBP18.91■□□□□ 0.62
HIF3A-211ENST00000528563 LPIN1Q14693 890 aa18.91■□□□□ 0.62
HIF3A-211ENST00000528563 ZNF174Q15697 407 aa18.91■□□□□ 0.62
HIF3A-211ENST00000528563 SEPT8Q92599 483 aa18.91■□□□□ 0.62
HIF3A-211ENST00000528563 SLC9A7Q96T83 725 aa18.91■□□□□ 0.62
HIF3A-211ENST00000528563 CELF4Q9BZC1 486 aaKnown RBP18.91■□□□□ 0.62
HIF3A-211ENST00000528563 SEMA6BQ9H3T3 888 aa18.91■□□□□ 0.62
HIF3A-211ENST00000528563 MTMR10Q9NXD2 777 aa18.91■□□□□ 0.62
HIF3A-211ENST00000528563 SQORQ9Y6N5 450 aa18.91■□□□□ 0.62
HIF3A-211ENST00000528563 EVPLQ92817 2033 aa18.91■□□□□ 0.62
HIF3A-211ENST00000528563 KDM3AQ9Y4C1 1321 aa18.91■□□□□ 0.62
HIF3A-211ENST00000528563 FBXO47Q5MNV8 452 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 ANO5Q75V66 913 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 LINC01465Q8N7H1 131 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 HSD17B14Q9BPX1 270 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 TTYH1Q9H313 450 aaPredicted RBP18.9■□□□□ 0.62
HIF3A-211ENST00000528563 RGL1Q9NZL6 768 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 WRAP73Q9P2S5 460 aaPredicted RBP18.9■□□□□ 0.62
HIF3A-211ENST00000528563 TMEM265A0A087WTH1 108 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 DDX11L8A8MPP1 907 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 SLITRK3O94933 977 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 GHRP10912 638 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 KCNJ6P48051 423 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 RABGGTBP53611 331 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 TMEM62Q0P6H9 643 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 RAB30Q15771 203 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 TTC38Q5R3I4 469 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 ZNF697Q5TEC3 545 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 LARP1BQ659C4 914 aaKnown RBP18.9■□□□□ 0.62
HIF3A-211ENST00000528563 NCAPH2Q6IBW4 605 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 EFCAB12Q6NXP0 572 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 HERC6Q8IVU3 1022 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 C4orf32Q8N8J7 132 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 TIFAQ96CG3 184 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 IFIH1Q9BYX4 1025 aaKnown RBP18.9■□□□□ 0.62
HIF3A-211ENST00000528563 MSRAQ9UJ68 235 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 PCDHA11Q9Y5I1 949 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 TRPV2Q9Y5S1 764 aa18.9■□□□□ 0.62
HIF3A-211ENST00000528563 CHD9Q3L8U1 2897 aa18.89■□□□□ 0.61
HIF3A-211ENST00000528563 TMEM150BA6NC51 233 aa18.89■□□□□ 0.61
HIF3A-211ENST00000528563 DKC1O60832 514 aaKnown RBP eCLIP18.89■□□□□ 0.61
HIF3A-211ENST00000528563 DEFB103AP81534 67 aa18.89■□□□□ 0.61
HIF3A-211ENST00000528563 C4orf19Q8IY42 314 aa18.89■□□□□ 0.61
HIF3A-211ENST00000528563 METTL13Q8N6R0 699 aa18.89■□□□□ 0.61
HIF3A-211ENST00000528563 USP38Q8NB14 1042 aa18.89■□□□□ 0.61
HIF3A-211ENST00000528563 APBB2Q92870 758 aa18.89■□□□□ 0.61
HIF3A-211ENST00000528563 DYDC2Q96IM9 177 aa18.89■□□□□ 0.61
HIF3A-211ENST00000528563 AGO3Q9H9G7 860 aaKnown RBP18.89■□□□□ 0.61
HIF3A-211ENST00000528563 CDHR5Q9HBB8 845 aa18.89■□□□□ 0.61
HIF3A-211ENST00000528563 NOL7Q9UMY1 257 aaKnown RBP18.89■□□□□ 0.61
HIF3A-211ENST00000528563 YBX2Q9Y2T7 364 aaKnown RBP18.89■□□□□ 0.61
HIF3A-211ENST00000528563 M0QZ92 97 aa18.88■□□□□ 0.61
HIF3A-211ENST00000528563 TBC1D8BQ0IIM8 1120 aa18.88■□□□□ 0.61
HIF3A-211ENST00000528563 MCTP1Q6DN14 999 aa18.88■□□□□ 0.61
HIF3A-211ENST00000528563 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.88■□□□□ 0.61
HIF3A-211ENST00000528563 TSHZ1Q6ZSZ6 1077 aa18.88■□□□□ 0.61
HIF3A-211ENST00000528563 EIF2AK1Q9BQI3 630 aaKnown RBP18.88■□□□□ 0.61
HIF3A-211ENST00000528563 SEPT9Q9UHD8 586 aaPredicted RBP18.88■□□□□ 0.61
HIF3A-211ENST00000528563 IGKV6-21A0A0C4DH24 114 aa18.87■□□□□ 0.61
HIF3A-211ENST00000528563 H3BQV1 296 aa18.87■□□□□ 0.61
HIF3A-211ENST00000528563 GPR32O75388 356 aa18.87■□□□□ 0.61
HIF3A-211ENST00000528563 MYOGP15173 224 aa18.87■□□□□ 0.61
HIF3A-211ENST00000528563 TMOD1P28289 359 aa18.87■□□□□ 0.61
HIF3A-211ENST00000528563 CLCN3P51790 818 aa18.87■□□□□ 0.61
HIF3A-211ENST00000528563 CTTNQ14247 550 aaKnown RBP18.87■□□□□ 0.61
HIF3A-211ENST00000528563 NBR1Q14596 966 aa18.87■□□□□ 0.61
HIF3A-211ENST00000528563 SNX21Q969T3 373 aa18.87■□□□□ 0.61
HIF3A-211ENST00000528563 INTS4Q96HW7 963 aaKnown RBP18.87■□□□□ 0.61
HIF3A-211ENST00000528563 FAM161BQ96MY7 647 aa18.87■□□□□ 0.61
HIF3A-211ENST00000528563 SH2D3AQ9BRG2 576 aa18.87■□□□□ 0.61
HIF3A-211ENST00000528563 LXNQ9BS40 222 aa18.87■□□□□ 0.61
HIF3A-211ENST00000528563 ZNF576Q9H609 170 aa18.87■□□□□ 0.61
HIF3A-211ENST00000528563 ZSWIM4Q9H7M6 989 aa18.87■□□□□ 0.61
HIF3A-211ENST00000528563 SUGCTQ9HAC7 445 aa18.87■□□□□ 0.61
HIF3A-211ENST00000528563 PCDHB6Q9Y5E3 794 aa18.87■□□□□ 0.61
HIF3A-211ENST00000528563 SIP14410 1827 aa18.87■□□□□ 0.61
HIF3A-211ENST00000528563 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.86■□□□□ 0.61
HIF3A-211ENST00000528563 ZBTB39O15060 712 aa18.86■□□□□ 0.61
HIF3A-211ENST00000528563 LYPLA2O95372 231 aa18.86■□□□□ 0.61
HIF3A-211ENST00000528563 VTNP04004 478 aa18.86■□□□□ 0.61
HIF3A-211ENST00000528563 OR52Z1P0C646 297 aa18.86■□□□□ 0.61
HIF3A-211ENST00000528563 CYP4A11Q02928 519 aa18.86■□□□□ 0.61
HIF3A-211ENST00000528563 MTERF2Q49AM1 385 aa18.86■□□□□ 0.61
HIF3A-211ENST00000528563 TMCO2Q7Z6W1 182 aaPredicted RBP18.86■□□□□ 0.61
HIF3A-211ENST00000528563 TPH2Q8IWU9 490 aa18.86■□□□□ 0.61
HIF3A-211ENST00000528563 ZNF710Q8N1W2 664 aa18.86■□□□□ 0.61
HIF3A-211ENST00000528563 LRRC71Q8N4P6 559 aa18.86■□□□□ 0.61
HIF3A-211ENST00000528563 ZNF579Q8NAF0 562 aaKnown RBP18.86■□□□□ 0.61
HIF3A-211ENST00000528563 ADAMTS10Q9H324 1103 aa18.86■□□□□ 0.61
HIF3A-211ENST00000528563 CYP26B1Q9NR63 512 aa18.86■□□□□ 0.61
HIF3A-211ENST00000528563 K7ELQ4 463 aaPredicted RBP18.85■□□□□ 0.61
HIF3A-211ENST00000528563 ENPP3O14638 875 aa18.85■□□□□ 0.61
HIF3A-211ENST00000528563 MAFO75444 373 aaPredicted RBP18.85■□□□□ 0.61
HIF3A-211ENST00000528563 CD52P31358 61 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms