RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 RNF10Q8N5U6 811 aaKnown RBP10.75□□□□□ -0.69
SF3B2-206ENST00000528302 STK17AQ9UEE5 414 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 NAGPAQ9UK23 515 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 LEMD3Q9Y2U8 911 aa10.75□□□□□ -0.69
SF3B2-206ENST00000528302 TIAM2Q8IVF5 1701 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 COL14A1Q05707 1796 aaKnown RBP10.74□□□□□ -0.69
SF3B2-206ENST00000528302 CACNA1SQ13698 1873 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 PJA2O43164 708 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 RPS6KA4O75676 772 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 AKAP3O75969 853 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 FAM107AO95990 144 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 XRCC5P13010 732 aaKnown RBP10.74□□□□□ -0.69
SF3B2-206ENST00000528302 SCP2P22307 547 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 GPSM2P81274 684 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 COG2Q14746 738 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 DOK7Q18PE1 504 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 GALNT17Q6IS24 598 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 HIBCHQ6NVY1 386 aaPredicted RBP10.74□□□□□ -0.69
SF3B2-206ENST00000528302 NME8Q8N427 588 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 PRPF38AQ8NAV1 312 aaKnown RBP10.74□□□□□ -0.69
SF3B2-206ENST00000528302 DAGLBQ8NCG7 672 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 N4BP2L2Q92802 583 aaPredicted RBP10.74□□□□□ -0.69
SF3B2-206ENST00000528302 SEC16BQ96JE7 1060 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 MTFR1LQ9H019 292 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 THRAP3Q9Y2W1 955 aaKnown RBP10.74□□□□□ -0.69
SF3B2-206ENST00000528302 ATMINO43313 823 aaPredicted RBP10.74□□□□□ -0.69
SF3B2-206ENST00000528302 SKAP2O75563 359 aaPredicted RBP10.74□□□□□ -0.69
SF3B2-206ENST00000528302 EPB41P11171 864 aaKnown RBP10.74□□□□□ -0.69
SF3B2-206ENST00000528302 FGFR4P22455 802 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 VPS41P49754 854 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 MSL1Q68DK7 614 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 CACNA2D3Q8IZS8 1091 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 WHAMMQ8TF30 809 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 ZKSCAN4Q969J2 545 aaPredicted RBP10.74□□□□□ -0.69
SF3B2-206ENST00000528302 SPZ1Q9BXG8 430 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 ADAM33Q9BZ11 813 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 BHMT2Q9H2M3 363 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 JMJD4Q9H9V9 463 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 MAGEF1Q9HAY2 307 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 ACP6Q9NPH0 428 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 TAS2R14Q9NYV8 317 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 PPP1R9AQ9ULJ8 1098 aa10.74□□□□□ -0.69
SF3B2-206ENST00000528302 HMGB1P1B2RPK0 211 aaPredicted RBP10.73□□□□□ -0.69
SF3B2-206ENST00000528302 TOM1O60784 492 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 H2AFZP0C0S5 128 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 CYP11B2P19099 503 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 POLD1P28340 1107 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 IFI35P80217 286 aaPredicted RBP10.73□□□□□ -0.69
SF3B2-206ENST00000528302 H2AFVQ71UI9 128 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 TBC1D1Q86TI0 1168 aaPredicted RBP10.73□□□□□ -0.69
SF3B2-206ENST00000528302 PALB2Q86YC2 1186 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 CPNE8Q86YQ8 564 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 TRIM59Q8IWR1 403 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 SUGP1Q8IWZ8 645 aaKnown RBP10.73□□□□□ -0.69
SF3B2-206ENST00000528302 ANKRD13AQ8IZ07 590 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 WDR66Q8TBY9 1149 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 ELAC2Q9BQ52 826 aaKnown RBP10.73□□□□□ -0.69
SF3B2-206ENST00000528302 TACO1Q9BSH4 297 aaKnown RBP10.73□□□□□ -0.69
SF3B2-206ENST00000528302 ANKRD2Q9GZV1 360 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 DBR1Q9UK59 544 aaKnown RBP10.73□□□□□ -0.69
SF3B2-206ENST00000528302 LCA5LO95447 670 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 ECHS1P30084 290 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 TM4SF1P30408 202 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 NMT1P30419 496 aaKnown RBP10.73□□□□□ -0.69
SF3B2-206ENST00000528302 KCNJ1P48048 391 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 GALCP54803 685 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 SPICE1Q8N0Z3 855 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 NEDD1Q8NHV4 660 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 NYXQ9GZU5 481 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 ERVK-5Q9HDB9 667 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 RIC8AQ9NPQ8 531 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 TSKSQ9UJT2 592 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 UTP11Q9Y3A2 253 aaKnown RBP10.73□□□□□ -0.69
SF3B2-206ENST00000528302 TRIM37O94972 964 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 PON1P27169 355 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 PPP2R2AP63151 447 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 CTTNQ14247 550 aaKnown RBP10.73□□□□□ -0.69
SF3B2-206ENST00000528302 TRIP13Q15645 432 aaPredicted RBP10.73□□□□□ -0.69
SF3B2-206ENST00000528302 ZKSCAN8Q15776 578 aaPredicted RBP10.73□□□□□ -0.69
SF3B2-206ENST00000528302 GLE1Q53GS7 698 aaKnown RBP10.73□□□□□ -0.69
SF3B2-206ENST00000528302 TPCN2Q8NHX9 752 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 BTBD6Q96KE9 485 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 REEP2Q9BRK0 252 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 RTFDC1Q9BY42 306 aaPredicted RBP10.73□□□□□ -0.69
SF3B2-206ENST00000528302 ISCUQ9H1K1 167 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 AZI2Q9H6S1 392 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 PCDHGC5Q9Y5F6 944 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 PCDHA1Q9Y5I3 950 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 IGSF9BQ9UPX0 1349 aa10.73□□□□□ -0.69
SF3B2-206ENST00000528302 USP11P51784 963 aa10.72□□□□□ -0.69
SF3B2-206ENST00000528302 ARSHQ5FYA8 562 aa10.72□□□□□ -0.69
SF3B2-206ENST00000528302 IRF2BP2Q7Z5L9 587 aa10.72□□□□□ -0.69
SF3B2-206ENST00000528302 ANKRD42Q8N9B4 389 aa10.72□□□□□ -0.69
SF3B2-206ENST00000528302 CUL5Q93034 780 aa10.72□□□□□ -0.69
SF3B2-206ENST00000528302 LRRC45Q96CN5 670 aa10.72□□□□□ -0.69
SF3B2-206ENST00000528302 LBHD1Q9BQE6 289 aaPredicted RBP10.72□□□□□ -0.69
SF3B2-206ENST00000528302 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.72□□□□□ -0.698e-10■■□□□ 13
SF3B2-206ENST00000528302 PCDHAC2Q9Y5I4 1007 aa10.72□□□□□ -0.69
SF3B2-206ENST00000528302 BCORQ6W2J9 1755 aa10.72□□□□□ -0.69
SF3B2-206ENST00000528302 DDX39AO00148 427 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms