RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 FAM178BQ8IXR5 827 aa17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 ERGIC2Q96RQ1 377 aa17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 ZNF408Q9H9D4 720 aa17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 ABHD10Q9NUJ1 306 aa17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 ZNF215Q9UL58 517 aaPredicted RBP17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 LUC7L2Q9Y383 392 aaKnown RBP17.87■□□□□ 0.45
SNRNP35-204ENST00000527158 POTEB2H3BUK9 544 aa17.86■□□□□ 0.45
SNRNP35-204ENST00000527158 DKC1O60832 514 aaKnown RBP eCLIP17.86■□□□□ 0.45
SNRNP35-204ENST00000527158 TRIM21P19474 475 aaKnown RBP17.86■□□□□ 0.45
SNRNP35-204ENST00000527158 RARRES1P49788 294 aa17.86■□□□□ 0.45
SNRNP35-204ENST00000527158 CNTN2Q02246 1040 aa17.86■□□□□ 0.45
SNRNP35-204ENST00000527158 GABPB1Q06547 395 aaPredicted RBP17.86■□□□□ 0.45
SNRNP35-204ENST00000527158 TSR1Q2NL82 804 aaKnown RBP17.86■□□□□ 0.45
SNRNP35-204ENST00000527158 IQCDQ96DY2 449 aa17.86■□□□□ 0.45
SNRNP35-204ENST00000527158 JPH1Q9HDC5 661 aaPredicted RBP17.86■□□□□ 0.45
SNRNP35-204ENST00000527158 TYW1Q9NV66 732 aaKnown RBP17.86■□□□□ 0.45
SNRNP35-204ENST00000527158 PRDM4Q9UKN5 801 aa17.86■□□□□ 0.45
SNRNP35-204ENST00000527158 CAPN11Q9UMQ6 739 aa17.86■□□□□ 0.45
SNRNP35-204ENST00000527158 HIP1RO75146 1068 aa17.86■□□□□ 0.45
SNRNP35-204ENST00000527158 NR2F2P24468 414 aa17.86■□□□□ 0.45
SNRNP35-204ENST00000527158 RPL13P26373 211 aaKnown RBP17.86■□□□□ 0.45
SNRNP35-204ENST00000527158 MAP1SQ66K74 1059 aaPredicted RBP17.86■□□□□ 0.45
SNRNP35-204ENST00000527158 ZC3H3Q8IXZ2 948 aaKnown RBP17.86■□□□□ 0.45
SNRNP35-204ENST00000527158 ANKEF1Q9NU02 776 aa17.86■□□□□ 0.45
SNRNP35-204ENST00000527158 A0A0G2JMZ2 1700 aa17.85■□□□□ 0.45
SNRNP35-204ENST00000527158 TTC26A0AVF1 554 aa17.85■□□□□ 0.45
SNRNP35-204ENST00000527158 PSAPP07602 524 aa17.85■□□□□ 0.45
SNRNP35-204ENST00000527158 ERCC3P19447 782 aa17.85■□□□□ 0.45
SNRNP35-204ENST00000527158 NMT1P30419 496 aaKnown RBP17.85■□□□□ 0.45
SNRNP35-204ENST00000527158 HOXD13P35453 343 aa17.85■□□□□ 0.45
SNRNP35-204ENST00000527158 ALDH5A1P51649 535 aaPredicted RBP17.85■□□□□ 0.45
SNRNP35-204ENST00000527158 MARSP56192 900 aaKnown RBP17.85■□□□□ 0.45
SNRNP35-204ENST00000527158 MOGSQ13724 837 aa17.85■□□□□ 0.45
SNRNP35-204ENST00000527158 ZNF720Q7Z2F6 126 aa17.85■□□□□ 0.45
SNRNP35-204ENST00000527158 TMTC1Q8IUR5 882 aa17.85■□□□□ 0.45
SNRNP35-204ENST00000527158 OR8K1Q8NGG5 319 aa17.85■□□□□ 0.45
SNRNP35-204ENST00000527158 ATP6V0A1Q93050 837 aa17.85■□□□□ 0.45
SNRNP35-204ENST00000527158 TIPINQ9BVW5 301 aa17.85■□□□□ 0.45
SNRNP35-204ENST00000527158 BCAS3Q9H6U6 928 aa17.85■□□□□ 0.45
SNRNP35-204ENST00000527158 LARSQ9P2J5 1176 aaKnown RBP17.85■□□□□ 0.45
SNRNP35-204ENST00000527158 SLC9A2Q9UBY0 812 aa17.85■□□□□ 0.45
SNRNP35-204ENST00000527158 PCDHB13Q9Y5F0 798 aa17.85■□□□□ 0.45
SNRNP35-204ENST00000527158 SRCAPQ6ZRS2 3230 aa17.85■□□□□ 0.45
SNRNP35-204ENST00000527158 UBE4BO95155 1302 aa17.85■□□□□ 0.45
SNRNP35-204ENST00000527158 CNMDO75829 334 aa17.84■□□□□ 0.45
SNRNP35-204ENST00000527158 UGCGQ16739 394 aa17.84■□□□□ 0.45
SNRNP35-204ENST00000527158 LOXHD1Q8IVV2 1947 aa17.84■□□□□ 0.45
SNRNP35-204ENST00000527158 RNF225M0QZC1 329 aaPredicted RBP17.84■□□□□ 0.45
SNRNP35-204ENST00000527158 NKRFO15226 690 aaKnown RBP eCLIP17.84■□□□□ 0.45
SNRNP35-204ENST00000527158 FECHP22830 423 aa17.84■□□□□ 0.45
SNRNP35-204ENST00000527158 ICAM3P32942 547 aa17.84■□□□□ 0.45
SNRNP35-204ENST00000527158 ETF1P62495 437 aaKnown RBP17.84■□□□□ 0.45
SNRNP35-204ENST00000527158 FAM193AP78312 1265 aa17.84■□□□□ 0.45
SNRNP35-204ENST00000527158 FIGNQ5HY92 759 aa17.84■□□□□ 0.45
SNRNP35-204ENST00000527158 GPAT2Q6NUI2 795 aa17.84■□□□□ 0.45
SNRNP35-204ENST00000527158 CYP26C1Q6V0L0 522 aa17.84■□□□□ 0.45
SNRNP35-204ENST00000527158 OTUD6AQ7L8S5 288 aa17.84■□□□□ 0.45
SNRNP35-204ENST00000527158 MPHOSPH6Q99547 160 aaKnown RBP17.84■□□□□ 0.45
SNRNP35-204ENST00000527158 RBPJLQ9UBG7 517 aa17.84■□□□□ 0.45
SNRNP35-204ENST00000527158 GABBR1Q9UBS5 961 aa17.84■□□□□ 0.45
SNRNP35-204ENST00000527158 PPP2R2CQ9Y2T4 447 aa17.84■□□□□ 0.45
SNRNP35-204ENST00000527158 SOWAHDA6NJG2 315 aa17.83■□□□□ 0.45
SNRNP35-204ENST00000527158 POTEJP0CG39 1038 aa17.83■□□□□ 0.45
SNRNP35-204ENST00000527158 XKR9Q5GH70 373 aa17.83■□□□□ 0.45
SNRNP35-204ENST00000527158 MAEAQ7L5Y9 396 aa17.83■□□□□ 0.45
SNRNP35-204ENST00000527158 PNMA3Q9UL41 463 aa17.83■□□□□ 0.45
SNRNP35-204ENST00000527158 FAM184BQ9ULE4 1060 aa17.83■□□□□ 0.45
SNRNP35-204ENST00000527158 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.83■□□□□ 0.45
SNRNP35-204ENST00000527158 USO1O60763 962 aaKnown RBP17.83■□□□□ 0.44
SNRNP35-204ENST00000527158 NR3C1P04150 777 aa17.83■□□□□ 0.44
SNRNP35-204ENST00000527158 GJA5P36382 358 aa17.83■□□□□ 0.44
SNRNP35-204ENST00000527158 MAPK7Q13164 816 aa17.83■□□□□ 0.44
SNRNP35-204ENST00000527158 ZC2HC1CQ53FD0 456 aaPredicted RBP17.83■□□□□ 0.44
SNRNP35-204ENST00000527158 MIS18BP1Q6P0N0 1132 aa17.83■□□□□ 0.44
SNRNP35-204ENST00000527158 TRMT1LQ7Z2T5 733 aaKnown RBP17.83■□□□□ 0.44
SNRNP35-204ENST00000527158 TRIM59Q8IWR1 403 aa17.83■□□□□ 0.44
SNRNP35-204ENST00000527158 DRC1Q96MC2 740 aa17.83■□□□□ 0.44
SNRNP35-204ENST00000527158 FIZ1Q96SL8 496 aa17.83■□□□□ 0.44
SNRNP35-204ENST00000527158 TXNRD2Q9NNW7 524 aa17.83■□□□□ 0.44
SNRNP35-204ENST00000527158 BACH1O14867 736 aa17.82■□□□□ 0.44
SNRNP35-204ENST00000527158 MAPTP10636 758 aaKnown RBP17.82■□□□□ 0.44
SNRNP35-204ENST00000527158 KLK7P49862 253 aa17.82■□□□□ 0.44
SNRNP35-204ENST00000527158 ACTR2P61160 394 aa17.82■□□□□ 0.44
SNRNP35-204ENST00000527158 KCNA1Q09470 495 aa17.82■□□□□ 0.44
SNRNP35-204ENST00000527158 SWSAP1Q6NVH7 229 aa17.82■□□□□ 0.44
SNRNP35-204ENST00000527158 SEPT14Q6ZU15 432 aa17.82■□□□□ 0.44
SNRNP35-204ENST00000527158 TOGARAM2Q6ZUX3 1019 aa17.82■□□□□ 0.44
SNRNP35-204ENST00000527158 FRMD5Q7Z6J6 570 aa17.82■□□□□ 0.44
SNRNP35-204ENST00000527158 DAW1Q8N136 415 aa17.82■□□□□ 0.44
SNRNP35-204ENST00000527158 DNAJC7Q99615 494 aa17.82■□□□□ 0.44
SNRNP35-204ENST00000527158 ASTN1O14525 1302 aa17.82■□□□□ 0.44
SNRNP35-204ENST00000527158 A0A1W2PQJ5 194 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 SOWAHBA6NEL2 793 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 SPDYE4A6NLX3 237 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 CCDC175P0C221 793 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 ZBED6P86452 979 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 SP4Q02446 784 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 ALCAMQ13740 583 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 KCTD2Q14681 263 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 HS2ST1Q7LGA3 356 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms