RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 AAK1Q2M2I8 961 aa6.68□□□□□ -1.34
SF3B2-205ENST00000526653 LRRC24Q50LG9 513 aa6.68□□□□□ -1.34
SF3B2-205ENST00000526653 METTL24Q5JXM2 366 aa6.68□□□□□ -1.34
SF3B2-205ENST00000526653 PRAMEF19Q5SWL8 479 aa6.68□□□□□ -1.34
SF3B2-205ENST00000526653 TRPV1Q8NER1 839 aa6.68□□□□□ -1.34
SF3B2-205ENST00000526653 WDR66Q8TBY9 1149 aa6.68□□□□□ -1.34
SF3B2-205ENST00000526653 DNAAF4Q8WXU2 420 aa6.68□□□□□ -1.34
SF3B2-205ENST00000526653 PLPPR2Q96GM1 343 aa6.68□□□□□ -1.34
SF3B2-205ENST00000526653 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.68□□□□□ -1.343e-10■□□□□ 10.7
SF3B2-205ENST00000526653 FBRSQ9HAH7 460 aa6.68□□□□□ -1.34
SF3B2-205ENST00000526653 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.68□□□□□ -1.34
SF3B2-205ENST00000526653 MAPK8IP1Q9UQF2 711 aa6.68□□□□□ -1.34
SF3B2-205ENST00000526653 RPAP1Q9BWH6 1393 aaPredicted RBP6.68□□□□□ -1.34
SF3B2-205ENST00000526653 ARID1BQ8NFD5 2236 aaPredicted RBP6.68□□□□□ -1.34
SF3B2-205ENST00000526653 MSCO60682 206 aa6.67□□□□□ -1.34
SF3B2-205ENST00000526653 PQBP1O60828 265 aaKnown RBP6.67□□□□□ -1.34
SF3B2-205ENST00000526653 LDHBP07195 334 aaKnown RBP6.67□□□□□ -1.34
SF3B2-205ENST00000526653 P4HBP07237 508 aaKnown RBP6.67□□□□□ -1.34
SF3B2-205ENST00000526653 CLTBP09497 229 aa6.67□□□□□ -1.34
SF3B2-205ENST00000526653 PRDX5P30044 214 aa6.67□□□□□ -1.34
SF3B2-205ENST00000526653 CLCN7P51798 805 aa6.67□□□□□ -1.34
SF3B2-205ENST00000526653 RRP1BQ14684 758 aaKnown RBP6.67□□□□□ -1.34
SF3B2-205ENST00000526653 C16orf59Q7L2K0 433 aa6.67□□□□□ -1.34
SF3B2-205ENST00000526653 CYFIP1Q7L576 1253 aa6.67□□□□□ -1.34
SF3B2-205ENST00000526653 GAL3ST3Q96A11 431 aa6.67□□□□□ -1.34
SF3B2-205ENST00000526653 APBA2Q99767 749 aa6.67□□□□□ -1.34
SF3B2-205ENST00000526653 FOXQ1Q9C009 403 aa6.67□□□□□ -1.34
SF3B2-205ENST00000526653 SLC28A3Q9HAS3 691 aa6.67□□□□□ -1.34
SF3B2-205ENST00000526653 IFT57Q9NWB7 429 aa6.67□□□□□ -1.34
SF3B2-205ENST00000526653 TMOD4Q9NZQ9 345 aa6.67□□□□□ -1.34
SF3B2-205ENST00000526653 MSRAQ9UJ68 235 aa6.67□□□□□ -1.34
SF3B2-205ENST00000526653 MROH5Q6ZUA9 1318 aa6.67□□□□□ -1.34
SF3B2-205ENST00000526653 CLSPNQ9HAW4 1339 aa6.67□□□□□ -1.34
SF3B2-205ENST00000526653 F6X3S4 739 aa6.66□□□□□ -1.34
SF3B2-205ENST00000526653 RFXAPO00287 272 aa6.66□□□□□ -1.34
SF3B2-205ENST00000526653 KIAA0355O15063 1070 aa6.66□□□□□ -1.34
SF3B2-205ENST00000526653 GLRX3O76003 335 aaKnown RBP6.66□□□□□ -1.34
SF3B2-205ENST00000526653 PDE8BO95263 885 aa6.66□□□□□ -1.34
SF3B2-205ENST00000526653 ACRP10323 421 aa6.66□□□□□ -1.34
SF3B2-205ENST00000526653 HOXA7P31268 230 aaPredicted RBP6.66□□□□□ -1.34
SF3B2-205ENST00000526653 NHLH1Q02575 133 aa6.66□□□□□ -1.34
SF3B2-205ENST00000526653 SLBPQ14493 270 aaKnown RBP eCLIP6.66□□□□□ -1.34
SF3B2-205ENST00000526653 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.66□□□□□ -1.34
SF3B2-205ENST00000526653 SV2BQ7L1I2 683 aa6.66□□□□□ -1.34
SF3B2-205ENST00000526653 HDXQ7Z353 690 aa6.66□□□□□ -1.34
SF3B2-205ENST00000526653 NPLOC4Q8TAT6 608 aa6.66□□□□□ -1.34
SF3B2-205ENST00000526653 IDI2Q9BXS1 227 aa6.66□□□□□ -1.34
SF3B2-205ENST00000526653 WNT10AQ9GZT5 417 aa6.66□□□□□ -1.34
SF3B2-205ENST00000526653 NKX2-4Q9H2Z4 354 aa6.66□□□□□ -1.34
SF3B2-205ENST00000526653 CD320Q9NPF0 282 aa6.66□□□□□ -1.34
SF3B2-205ENST00000526653 DDX4Q9NQI0 724 aaKnown RBP6.66□□□□□ -1.34
SF3B2-205ENST00000526653 C9orf78Q9NZ63 289 aaPredicted RBP6.66□□□□□ -1.34
SF3B2-205ENST00000526653 CTNND2Q9UQB3 1225 aa6.66□□□□□ -1.34
SF3B2-205ENST00000526653 REV3LO60673 3130 aa6.66□□□□□ -1.34
SF3B2-205ENST00000526653 MGAMO43451 1857 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 WDFY4Q6ZS81 3184 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 PRR33A8MZF0 331 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 PI4K2BG5E9Z4 385 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 APAF1O14727 1248 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 IFIT1P09914 478 aaKnown RBP6.65□□□□□ -1.34
SF3B2-205ENST00000526653 CAP2P40123 477 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 CDK8P49336 464 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 BACE1P56817 501 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 KCNA1Q09470 495 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 SNX17Q15036 470 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 WDR43Q15061 677 aaKnown RBP eCLIP6.65□□□□□ -1.34
SF3B2-205ENST00000526653 LRRC41Q15345 812 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 NKG7Q16617 165 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 TMEM240Q5SV17 173 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 BEND3Q5T5X7 828 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 LCE1DQ5T752 114 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 ZNF365Q70YC5 407 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 DPP9Q86TI2 863 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 ZSWIM9Q86XI8 627 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 SLC44A5Q8NCS7 719 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 KLHDC4Q8TBB5 520 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 HERVK_113Q902F9 699 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 TSR2Q969E8 191 aaKnown RBP6.65□□□□□ -1.34
SF3B2-205ENST00000526653 HSPA12BQ96MM6 686 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 MIPEPQ99797 713 aa6.65□□□□□ -1.34
SF3B2-205ENST00000526653 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.65□□□□□ -1.34
SF3B2-205ENST00000526653 TPX2Q9ULW0 747 aaKnown RBP6.65□□□□□ -1.34
SF3B2-205ENST00000526653 UTYO14607 1347 aa6.65□□□□□ -1.35
SF3B2-205ENST00000526653 ATRNL1Q5VV63 1379 aa6.65□□□□□ -1.35
SF3B2-205ENST00000526653 MYO9BQ13459 2157 aa6.65□□□□□ -1.35
SF3B2-205ENST00000526653 TCF20Q9UGU0 1960 aaKnown RBP6.64□□□□□ -1.35
SF3B2-205ENST00000526653 CHD7Q9P2D1 2997 aa6.64□□□□□ -1.35
SF3B2-205ENST00000526653 ZNF503-AS2A6NEH8 195 aa6.64□□□□□ -1.35
SF3B2-205ENST00000526653 SLC15A5A6NIM6 579 aa6.64□□□□□ -1.35
SF3B2-205ENST00000526653 GRM8O00222 908 aa6.64□□□□□ -1.35
SF3B2-205ENST00000526653 ERC2O15083 957 aa6.64□□□□□ -1.35
SF3B2-205ENST00000526653 TIMP1P01033 207 aa6.64□□□□□ -1.35
SF3B2-205ENST00000526653 MYOGP15173 224 aa6.64□□□□□ -1.35
SF3B2-205ENST00000526653 CSF2RAP15509 400 aa6.64□□□□□ -1.35
SF3B2-205ENST00000526653 RABGGTBP53611 331 aa6.64□□□□□ -1.35
SF3B2-205ENST00000526653 ETF1P62495 437 aaKnown RBP6.64□□□□□ -1.35
SF3B2-205ENST00000526653 CALD1Q05682 793 aaKnown RBP6.64□□□□□ -1.35
SF3B2-205ENST00000526653 TWISTNBQ3B726 338 aaPredicted RBP6.64□□□□□ -1.35
SF3B2-205ENST00000526653 WIPI1Q5MNZ9 446 aaPredicted RBP6.64□□□□□ -1.35
SF3B2-205ENST00000526653 TTBK2Q6IQ55 1244 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms