RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 TRAF6Q9Y4K3 522 aa5.91□□□□□ -1.46
USP48-211ENST00000526044 KCTD3Q9Y597 815 aa5.91□□□□□ -1.46
USP48-211ENST00000526044 USP6P35125 1406 aa5.91□□□□□ -1.46
USP48-211ENST00000526044 RFXAPO00287 272 aa5.9□□□□□ -1.46
USP48-211ENST00000526044 C6orf222P0C671 652 aaPredicted RBP5.9□□□□□ -1.46
USP48-211ENST00000526044 NAT1P18440 290 aa5.9□□□□□ -1.46
USP48-211ENST00000526044 IGFBP6P24592 240 aaPredicted RBP5.9□□□□□ -1.46
USP48-211ENST00000526044 PMLP29590 882 aa5.9□□□□□ -1.46
USP48-211ENST00000526044 STEAP3Q658P3 488 aa5.9□□□□□ -1.46
USP48-211ENST00000526044 NME9Q86XW9 330 aa5.9□□□□□ -1.46
USP48-211ENST00000526044 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.9□□□□□ -1.46
USP48-211ENST00000526044 CPA5Q8WXQ8 436 aa5.9□□□□□ -1.46
USP48-211ENST00000526044 COG3Q96JB2 828 aa5.9□□□□□ -1.46
USP48-211ENST00000526044 C20orf173Q96LM9 149 aa5.9□□□□□ -1.46
USP48-211ENST00000526044 BCAS3Q9H6U6 928 aa5.9□□□□□ -1.46
USP48-211ENST00000526044 USP35Q9P2H5 1018 aa5.9□□□□□ -1.46
USP48-211ENST00000526044 PPARGC1AQ9UBK2 798 aaKnown RBP5.9□□□□□ -1.46
USP48-211ENST00000526044 PLA2G2DQ9UNK4 145 aa5.9□□□□□ -1.46
USP48-211ENST00000526044 PTCH2Q9Y6C5 1203 aa5.9□□□□□ -1.46
USP48-211ENST00000526044 ROBO1Q9Y6N7 1651 aa5.9□□□□□ -1.47
USP48-211ENST00000526044 MON2Q7Z3U7 1717 aa5.9□□□□□ -1.47
USP48-211ENST00000526044 EDC4Q6P2E9 1401 aaKnown RBP5.9□□□□□ -1.47
USP48-211ENST00000526044 NSD3Q9BZ95 1437 aa5.9□□□□□ -1.47
USP48-211ENST00000526044 FAM47E-STBD1D6RA91 191 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 KRIT1O00522 736 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 MAFKO60675 156 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 TADA3O75528 432 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 SOD2P04179 222 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 ATF2P15336 505 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 SYN1P17600 705 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 BMP7P18075 431 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 GRK2P25098 689 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 GRK3P35626 688 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 SSPNQ14714 243 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 RALBP1Q15311 655 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 EMC4Q5J8M3 183 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 TMEFF1Q8IYR6 380 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 PIF1Q9H611 641 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 PRKRIP1Q9H875 184 aaPredicted RBP5.89□□□□□ -1.47
USP48-211ENST00000526044 ZNF652Q9Y2D9 606 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 FAN1Q9Y2M0 1017 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 SPATA31A3Q5VYP0 1347 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 SBNO1A3KN83 1393 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 NSD2O96028 1365 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 NPC1L1Q9UHC9 1359 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 SSH2Q76I76 1423 aa5.89□□□□□ -1.47
USP48-211ENST00000526044 FOXD2O60548 495 aaPredicted RBP5.88□□□□□ -1.47
USP48-211ENST00000526044 EFCAB14O75071 495 aa5.88□□□□□ -1.47
USP48-211ENST00000526044 APPP05067 770 aa5.88□□□□□ -1.47
USP48-211ENST00000526044 PI3P19957 117 aa5.88□□□□□ -1.47
USP48-211ENST00000526044 TNNT2P45379 298 aaPredicted RBP5.88□□□□□ -1.47
USP48-211ENST00000526044 FOXO4P98177 505 aa5.88□□□□□ -1.47
USP48-211ENST00000526044 GUCY1A3Q02108 690 aa5.88□□□□□ -1.47
USP48-211ENST00000526044 CACNB2Q08289 660 aaPredicted RBP5.88□□□□□ -1.47
USP48-211ENST00000526044 SPIRE1Q08AE8 756 aa5.88□□□□□ -1.47
USP48-211ENST00000526044 PAK1Q13153 545 aa5.88□□□□□ -1.47
USP48-211ENST00000526044 CNKSR3Q6P9H4 555 aa5.88□□□□□ -1.47
USP48-211ENST00000526044 MTDHQ86UE4 582 aaKnown RBP5.88□□□□□ -1.47
USP48-211ENST00000526044 FAM129CQ86XR2 697 aa5.88□□□□□ -1.47
USP48-211ENST00000526044 NLGN1Q8N2Q7 840 aa5.88□□□□□ -1.47
USP48-211ENST00000526044 KCNH5Q8NCM2 988 aa5.88□□□□□ -1.47
USP48-211ENST00000526044 KCNJ15Q99712 375 aa5.88□□□□□ -1.47
USP48-211ENST00000526044 SMOC1Q9H4F8 434 aa5.88□□□□□ -1.47
USP48-211ENST00000526044 SLC6A20Q9NP91 592 aa5.88□□□□□ -1.47
USP48-211ENST00000526044 PHLPP1O60346 1717 aa5.88□□□□□ -1.47
USP48-211ENST00000526044 KIF20BQ96Q89 1820 aa5.88□□□□□ -1.47
USP48-211ENST00000526044 GCP02774 474 aa5.87□□□□□ -1.47
USP48-211ENST00000526044 GNAT1P11488 350 aa5.87□□□□□ -1.47
USP48-211ENST00000526044 CYP4F22Q6NT55 531 aa5.87□□□□□ -1.47
USP48-211ENST00000526044 ETV3LQ6ZN32 361 aa5.87□□□□□ -1.47
USP48-211ENST00000526044 OTOP3Q7RTS5 596 aa5.87□□□□□ -1.47
USP48-211ENST00000526044 B3GNT8Q7Z7M8 397 aa5.87□□□□□ -1.47
USP48-211ENST00000526044 MIB1Q86YT6 1006 aa5.87□□□□□ -1.47
USP48-211ENST00000526044 TMEM151BQ8IW70 566 aa5.87□□□□□ -1.47
USP48-211ENST00000526044 PIP4K2CQ8TBX8 421 aa5.87□□□□□ -1.47
USP48-211ENST00000526044 PHOSPHO1Q8TCT1 267 aa5.87□□□□□ -1.47
USP48-211ENST00000526044 PANK1Q8TE04 598 aa5.87□□□□□ -1.47
USP48-211ENST00000526044 SH3TC2Q8TF17 1288 aa5.87□□□□□ -1.47
USP48-211ENST00000526044 MRPL4Q9BYD3 311 aaKnown RBP5.87□□□□□ -1.47
USP48-211ENST00000526044 KRTAP17-1Q9BYP8 105 aa5.87□□□□□ -1.47
USP48-211ENST00000526044 IPPKQ9H8X2 491 aa5.87□□□□□ -1.47
USP48-211ENST00000526044 EPB41L4AQ9HCS5 686 aaPredicted RBP5.87□□□□□ -1.47
USP48-211ENST00000526044 NDOR1Q9UHB4 597 aa5.87□□□□□ -1.47
USP48-211ENST00000526044 PCDHB4Q9Y5E5 795 aa5.87□□□□□ -1.47
USP48-211ENST00000526044 PCDHA8Q9Y5H6 950 aa5.87□□□□□ -1.47
USP48-211ENST00000526044 ARHGEF10O15013 1369 aa5.87□□□□□ -1.47
USP48-211ENST00000526044 PXDNQ92626 1479 aa5.87□□□□□ -1.47
USP48-211ENST00000526044 NHSL1Q5SYE7 1610 aa5.87□□□□□ -1.47
USP48-211ENST00000526044 MAP2P11137 1827 aaKnown RBP5.87□□□□□ -1.47
USP48-211ENST00000526044 TRPM3Q9HCF6 1732 aaPredicted RBP5.86□□□□□ -1.47
USP48-211ENST00000526044 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.86□□□□□ -1.47
USP48-211ENST00000526044 TCRBV5S2A0A599 114 aa5.86□□□□□ -1.47
USP48-211ENST00000526044 CRTAMO95727 393 aa5.86□□□□□ -1.47
USP48-211ENST00000526044 COL6A2P12110 1019 aa5.86□□□□□ -1.47
USP48-211ENST00000526044 PPP2R1AP30153 589 aa5.86□□□□□ -1.47
USP48-211ENST00000526044 HSPA1LP34931 641 aa5.86□□□□□ -1.47
USP48-211ENST00000526044 MC3RP41968 323 aa5.86□□□□□ -1.47
USP48-211ENST00000526044 LIMS1P48059 325 aa5.86□□□□□ -1.47
USP48-211ENST00000526044 MTHFSP49914 203 aa5.86□□□□□ -1.47
USP48-211ENST00000526044 SQSTM1Q13501 440 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms