RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 UBE4AQ14139 1066 aa6.02□□□□□ -1.45
CSDE1-211ENST00000525970 FAM102BQ5T8I3 360 aa6.02□□□□□ -1.45
CSDE1-211ENST00000525970 STEAP3Q658P3 488 aa6.02□□□□□ -1.45
CSDE1-211ENST00000525970 FAM124AQ86V42 546 aa6.02□□□□□ -1.45
CSDE1-211ENST00000525970 MIB1Q86YT6 1006 aa6.02□□□□□ -1.45
CSDE1-211ENST00000525970 EXOC8Q8IYI6 725 aa6.02□□□□□ -1.45
CSDE1-211ENST00000525970 LGI4Q8N135 537 aa6.02□□□□□ -1.45
CSDE1-211ENST00000525970 NXPE1Q8N323 547 aa6.02□□□□□ -1.45
CSDE1-211ENST00000525970 TTLL6Q8N841 843 aa6.02□□□□□ -1.45
CSDE1-211ENST00000525970 IGSF22Q8N9C0 903 aa6.02□□□□□ -1.45
CSDE1-211ENST00000525970 PCDH19Q8TAB3 1148 aa6.02□□□□□ -1.45
CSDE1-211ENST00000525970 PSMD1Q99460 953 aa6.02□□□□□ -1.45
CSDE1-211ENST00000525970 GORASP1Q9BQQ3 440 aa6.02□□□□□ -1.45
CSDE1-211ENST00000525970 RHOBTB2Q9BYZ6 727 aa6.02□□□□□ -1.45
CSDE1-211ENST00000525970 CELF4Q9BZC1 486 aaKnown RBP6.02□□□□□ -1.45
CSDE1-211ENST00000525970 ARNT2Q9HBZ2 717 aa6.02□□□□□ -1.45
CSDE1-211ENST00000525970 B4GALT6Q9UBX8 382 aa6.02□□□□□ -1.45
CSDE1-211ENST00000525970 KRIT1O00522 736 aa6.01□□□□□ -1.45
CSDE1-211ENST00000525970 CAND2O75155 1236 aa6.01□□□□□ -1.45
CSDE1-211ENST00000525970 FKBP9O95302 570 aa6.01□□□□□ -1.45
CSDE1-211ENST00000525970 SOD2P04179 222 aa6.01□□□□□ -1.45
CSDE1-211ENST00000525970 APPP05067 770 aa6.01□□□□□ -1.45
CSDE1-211ENST00000525970 SMAD4Q13485 552 aaKnown RBP6.01□□□□□ -1.45
CSDE1-211ENST00000525970 RGL3Q3MIN7 710 aa6.01□□□□□ -1.45
CSDE1-211ENST00000525970 TBC1D10BQ4KMP7 808 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-211ENST00000525970 CREB3L3Q68CJ9 461 aa6.01□□□□□ -1.45
CSDE1-211ENST00000525970 BORAQ6PGQ7 559 aa6.01□□□□□ -1.45
CSDE1-211ENST00000525970 FKBP9P1Q75LS8 142 aa6.01□□□□□ -1.45
CSDE1-211ENST00000525970 OVCH1Q7RTY7 1134 aa6.01□□□□□ -1.45
CSDE1-211ENST00000525970 ZBTB46Q86UZ6 589 aa6.01□□□□□ -1.45
CSDE1-211ENST00000525970 ZC3H18Q86VM9 953 aaKnown RBP6.01□□□□□ -1.45
CSDE1-211ENST00000525970 MORC4Q8TE76 937 aa6.01□□□□□ -1.45
CSDE1-211ENST00000525970 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.01□□□□□ -1.45
CSDE1-211ENST00000525970 CDIP1Q9H305 208 aa6.01□□□□□ -1.45
CSDE1-211ENST00000525970 TCF7L1Q9HCS4 588 aa6.01□□□□□ -1.45
CSDE1-211ENST00000525970 AASDHPPTQ9NRN7 309 aa6.01□□□□□ -1.45
CSDE1-211ENST00000525970 FAM47E-STBD1D6RA91 191 aa6□□□□□ -1.45
CSDE1-211ENST00000525970 PRPF3O43395 683 aaKnown RBP6□□□□□ -1.45
CSDE1-211ENST00000525970 MAFKO60675 156 aa6□□□□□ -1.45
CSDE1-211ENST00000525970 GNAT1P11488 350 aa6□□□□□ -1.45
CSDE1-211ENST00000525970 COL6A2P12110 1019 aa6□□□□□ -1.45
CSDE1-211ENST00000525970 ATP2A2P16615 1042 aaKnown RBP6□□□□□ -1.45
CSDE1-211ENST00000525970 ZXDAP98168 799 aa6□□□□□ -1.45
CSDE1-211ENST00000525970 SPIRE1Q08AE8 756 aa6□□□□□ -1.45
CSDE1-211ENST00000525970 TMEM177Q53S58 311 aa6□□□□□ -1.45
CSDE1-211ENST00000525970 SMC5Q8IY18 1101 aa6□□□□□ -1.45
CSDE1-211ENST00000525970 MAGEB6Q8N7X4 407 aa6□□□□□ -1.45
CSDE1-211ENST00000525970 PIP4K2CQ8TBX8 421 aa6□□□□□ -1.45
CSDE1-211ENST00000525970 LOXL4Q96JB6 756 aa6□□□□□ -1.45
CSDE1-211ENST00000525970 KRTAP3-1Q9BYR8 98 aa6□□□□□ -1.45
CSDE1-211ENST00000525970 SLC13A1Q9BZW2 595 aa6□□□□□ -1.45
CSDE1-211ENST00000525970 IPPKQ9H8X2 491 aa6□□□□□ -1.45
CSDE1-211ENST00000525970 EMC7Q9NPA0 242 aa6□□□□□ -1.45
CSDE1-211ENST00000525970 NGRNQ9NPE2 291 aaKnown RBP6□□□□□ -1.45
CSDE1-211ENST00000525970 COQ6Q9Y2Z9 468 aa6□□□□□ -1.45
CSDE1-211ENST00000525970 PCDHB4Q9Y5E5 795 aa6□□□□□ -1.45
CSDE1-211ENST00000525970 MROH6A6NGR9 719 aa5.99□□□□□ -1.45
CSDE1-211ENST00000525970 MATN3O15232 486 aa5.99□□□□□ -1.45
CSDE1-211ENST00000525970 ZNF20P17024 532 aa5.99□□□□□ -1.45
CSDE1-211ENST00000525970 ATF3P18847 181 aa5.99□□□□□ -1.45
CSDE1-211ENST00000525970 PAK1Q13153 545 aa5.99□□□□□ -1.45
CSDE1-211ENST00000525970 GORABQ5T7V8 394 aa5.99□□□□□ -1.45
CSDE1-211ENST00000525970 OTOP1Q7RTM1 612 aa5.99□□□□□ -1.45
CSDE1-211ENST00000525970 CHST14Q8NCH0 376 aa5.99□□□□□ -1.45
CSDE1-211ENST00000525970 VTA1Q9NP79 307 aa5.99□□□□□ -1.45
CSDE1-211ENST00000525970 SLC6A20Q9NP91 592 aa5.99□□□□□ -1.45
CSDE1-211ENST00000525970 SPTLC3Q9NUV7 552 aa5.99□□□□□ -1.45
CSDE1-211ENST00000525970 ZNF180Q9UJW8 692 aa5.99□□□□□ -1.45
CSDE1-211ENST00000525970 ZNF652Q9Y2D9 606 aa5.99□□□□□ -1.45
CSDE1-211ENST00000525970 EIF3JO75822 258 aaKnown RBP5.98□□□□□ -1.45
CSDE1-211ENST00000525970 SRGAP2CP0DJJ0 459 aa5.98□□□□□ -1.45
CSDE1-211ENST00000525970 IL2P60568 153 aa5.98□□□□□ -1.45
CSDE1-211ENST00000525970 FAPQ12884 760 aa5.98□□□□□ -1.45
CSDE1-211ENST00000525970 MLC1Q15049 377 aa5.98□□□□□ -1.45
CSDE1-211ENST00000525970 ATP13A4Q4VNC1 1196 aa5.98□□□□□ -1.45
CSDE1-211ENST00000525970 PRR31Q5SQ13 230 aa5.98□□□□□ -1.45
CSDE1-211ENST00000525970 CD300LDQ6UXZ3 194 aa5.98□□□□□ -1.45
CSDE1-211ENST00000525970 OTOP3Q7RTS5 596 aa5.98□□□□□ -1.45
CSDE1-211ENST00000525970 ZC3H7AQ8IWR0 971 aaKnown RBP5.98□□□□□ -1.45
CSDE1-211ENST00000525970 FAM126BQ8IXS8 530 aa5.98□□□□□ -1.45
CSDE1-211ENST00000525970 CHTF18Q8WVB6 975 aa5.98□□□□□ -1.45
CSDE1-211ENST00000525970 JPH3Q8WXH2 748 aaPredicted RBP5.98□□□□□ -1.45
CSDE1-211ENST00000525970 C8orf49Q96NF6 230 aa5.98□□□□□ -1.45
CSDE1-211ENST00000525970 RPS6KC1Q96S38 1066 aa5.98□□□□□ -1.45
CSDE1-211ENST00000525970 ZNF700Q9H0M5 742 aa5.98□□□□□ -1.45
CSDE1-211ENST00000525970 SMOC1Q9H4F8 434 aa5.98□□□□□ -1.45
CSDE1-211ENST00000525970 MYOTQ9UBF9 498 aa5.98□□□□□ -1.45
CSDE1-211ENST00000525970 INVSQ9Y283 1065 aa5.98□□□□□ -1.45
CSDE1-211ENST00000525970 C9orf118A6NHY6 69 aa5.97□□□□□ -1.45
CSDE1-211ENST00000525970 SLC27A2O14975 620 aa5.97□□□□□ -1.45
CSDE1-211ENST00000525970 AKAP8O43823 692 aaKnown RBP5.97□□□□□ -1.45
CSDE1-211ENST00000525970 GAS7O60861 476 aa5.97□□□□□ -1.45
CSDE1-211ENST00000525970 ULK1O75385 1050 aa5.97□□□□□ -1.45
CSDE1-211ENST00000525970 TADA3O75528 432 aa5.97□□□□□ -1.45
CSDE1-211ENST00000525970 ZSCAN20P17040 1043 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-211ENST00000525970 ITGA1P56199 1179 aa5.97□□□□□ -1.45
CSDE1-211ENST00000525970 KRT85P78386 507 aa5.97□□□□□ -1.45
CSDE1-211ENST00000525970 ST5P78524 1137 aa5.97□□□□□ -1.45
CSDE1-211ENST00000525970 BIRC2Q13490 618 aa5.97□□□□□ -1.45
CSDE1-211ENST00000525970 SART3Q15020 963 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms