RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 MAN2B1O00754 1011 aa5.39□□□□□ -1.55
CD44-219ENST00000525685 KCNK3O14649 394 aa5.39□□□□□ -1.55
CD44-219ENST00000525685 HIP1RO75146 1068 aa5.39□□□□□ -1.55
CD44-219ENST00000525685 FBXO21O94952 628 aa5.39□□□□□ -1.55
CD44-219ENST00000525685 IL18BPO95998 194 aa5.39□□□□□ -1.55
CD44-219ENST00000525685 AMY2AP04746 511 aa5.39□□□□□ -1.55
CD44-219ENST00000525685 PTPN1P18031 435 aaKnown RBP5.39□□□□□ -1.55
CD44-219ENST00000525685 AMY2BP19961 511 aa5.39□□□□□ -1.55
CD44-219ENST00000525685 MASP1P48740 699 aa5.39□□□□□ -1.55
CD44-219ENST00000525685 SCNN1BP51168 640 aa5.39□□□□□ -1.55
CD44-219ENST00000525685 EPHB4P54760 987 aa5.39□□□□□ -1.55
CD44-219ENST00000525685 TMEM177Q53S58 311 aa5.39□□□□□ -1.55
CD44-219ENST00000525685 GLB1LQ6UWU2 654 aa5.39□□□□□ -1.55
CD44-219ENST00000525685 Q6ZUG5 572 aa5.39□□□□□ -1.55
CD44-219ENST00000525685 DDX46Q7L014 1031 aaKnown RBP5.39□□□□□ -1.55
CD44-219ENST00000525685 STPG3Q8N7X2 389 aa5.39□□□□□ -1.55
CD44-219ENST00000525685 UBR7Q8N806 425 aa5.39□□□□□ -1.55
CD44-219ENST00000525685 LOXL4Q96JB6 756 aa5.39□□□□□ -1.55
CD44-219ENST00000525685 CUX2O14529 1486 aa5.39□□□□□ -1.55
CD44-219ENST00000525685 SLC12A8A0AV02 714 aa5.38□□□□□ -1.55
CD44-219ENST00000525685 GLRX3O76003 335 aaKnown RBP5.38□□□□□ -1.55
CD44-219ENST00000525685 INSRRP14616 1297 aa5.38□□□□□ -1.55
CD44-219ENST00000525685 CPEP16870 476 aa5.38□□□□□ -1.55
CD44-219ENST00000525685 JAM2P57087 298 aa5.38□□□□□ -1.55
CD44-219ENST00000525685 PPP2CBP62714 309 aa5.38□□□□□ -1.55
CD44-219ENST00000525685 PPP2CAP67775 309 aa5.38□□□□□ -1.55
CD44-219ENST00000525685 DBPQ10586 325 aaPredicted RBP5.38□□□□□ -1.55
CD44-219ENST00000525685 ARHGAP44Q17R89 818 aa5.38□□□□□ -1.55
CD44-219ENST00000525685 ZXDCQ2QGD7 858 aaPredicted RBP5.38□□□□□ -1.55
CD44-219ENST00000525685 FIGNQ5HY92 759 aa5.38□□□□□ -1.55
CD44-219ENST00000525685 BTBD8Q5XKL5 378 aa5.38□□□□□ -1.55
CD44-219ENST00000525685 ARHGEF18Q6ZSZ5 1173 aa5.38□□□□□ -1.55
CD44-219ENST00000525685 ZCRB1Q8TBF4 217 aaKnown RBP5.38□□□□□ -1.55
CD44-219ENST00000525685 AJUBAQ96IF1 538 aa5.38□□□□□ -1.55
CD44-219ENST00000525685 C8orf49Q96NF6 230 aa5.38□□□□□ -1.55
CD44-219ENST00000525685 GPR20Q99678 358 aa5.38□□□□□ -1.55
CD44-219ENST00000525685 C1QTNF3Q9BXJ4 246 aa5.38□□□□□ -1.55
CD44-219ENST00000525685 CAAP1Q9H8G2 361 aa5.38□□□□□ -1.55
CD44-219ENST00000525685 SLC39A2Q9NP94 309 aa5.38□□□□□ -1.55
CD44-219ENST00000525685 RIC8BQ9NVN3 520 aa5.38□□□□□ -1.55
CD44-219ENST00000525685 MAPRE3Q9UPY8 281 aa5.38□□□□□ -1.55
CD44-219ENST00000525685 ZDHHC9Q9Y397 364 aa5.38□□□□□ -1.55
CD44-219ENST00000525685 ATP23Q9Y6H3 246 aa5.38□□□□□ -1.55
CD44-219ENST00000525685 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.37□□□□□ -1.55
CD44-219ENST00000525685 PTPDC1A2A3K4 754 aa5.37□□□□□ -1.55
CD44-219ENST00000525685 ZNF561-AS1K7EIQ3 104 aa5.37□□□□□ -1.55
CD44-219ENST00000525685 SCDO00767 359 aa5.37□□□□□ -1.55
CD44-219ENST00000525685 GPR42O15529 346 aa5.37□□□□□ -1.55
CD44-219ENST00000525685 B4GALT4O60513 344 aa5.37□□□□□ -1.55
CD44-219ENST00000525685 ZNF20P17024 532 aa5.37□□□□□ -1.55
CD44-219ENST00000525685 PCBP1Q15365 356 aaKnown RBP eCLIP5.37□□□□□ -1.55
CD44-219ENST00000525685 ZNF174Q15697 407 aa5.37□□□□□ -1.55
CD44-219ENST00000525685 CPZQ66K79 652 aa5.37□□□□□ -1.55
CD44-219ENST00000525685 ABHD17CQ6PCB6 329 aa5.37□□□□□ -1.55
CD44-219ENST00000525685 CHST14Q8NCH0 376 aa5.37□□□□□ -1.55
CD44-219ENST00000525685 OR2W6PQ8NHA6 318 aa5.37□□□□□ -1.55
CD44-219ENST00000525685 USP7Q93009 1102 aa5.37□□□□□ -1.55
CD44-219ENST00000525685 TACO1Q9BSH4 297 aaKnown RBP5.37□□□□□ -1.55
CD44-219ENST00000525685 KATNBL1Q9H079 304 aa5.37□□□□□ -1.55
CD44-219ENST00000525685 MYRFQ9Y2G1 1151 aa5.37□□□□□ -1.55
CD44-219ENST00000525685 A0A087X0B3 334 aa5.36□□□□□ -1.55
CD44-219ENST00000525685 NPEPPSL1A6NEC2 478 aa5.36□□□□□ -1.55
CD44-219ENST00000525685 H0Y858 1186 aa5.36□□□□□ -1.55
CD44-219ENST00000525685 H7C1D1 291 aa5.36□□□□□ -1.55
CD44-219ENST00000525685 KCNA6P17658 529 aa5.36□□□□□ -1.55
CD44-219ENST00000525685 CSF2RBP32927 897 aa5.36□□□□□ -1.55
CD44-219ENST00000525685 GJA4P35212 333 aa5.36□□□□□ -1.55
CD44-219ENST00000525685 IL2P60568 153 aa5.36□□□□□ -1.55
CD44-219ENST00000525685 LACTBP83111 547 aaPredicted RBP5.36□□□□□ -1.55
CD44-219ENST00000525685 ICAM4Q14773 271 aa5.36□□□□□ -1.55
CD44-219ENST00000525685 TMEM132BQ14DG7 1078 aa5.36□□□□□ -1.55
CD44-219ENST00000525685 SLFN13Q68D06 897 aa5.36□□□□□ -1.55
CD44-219ENST00000525685 OVCH1Q7RTY7 1134 aa5.36□□□□□ -1.55
CD44-219ENST00000525685 RALYLQ86SE5 291 aaKnown RBP5.36□□□□□ -1.55
CD44-219ENST00000525685 C11orf74Q86VG3 221 aa5.36□□□□□ -1.55
CD44-219ENST00000525685 PTPN18Q99952 460 aa5.36□□□□□ -1.55
CD44-219ENST00000525685 BOCQ9BWV1 1114 aa5.36□□□□□ -1.55
CD44-219ENST00000525685 MEGF9Q9H1U4 602 aa5.36□□□□□ -1.55
CD44-219ENST00000525685 PCIF1Q9H4Z3 704 aa5.36□□□□□ -1.55
CD44-219ENST00000525685 SMURF1Q9HCE7 757 aa5.36□□□□□ -1.55
CD44-219ENST00000525685 ST6GALNAC2Q9UJ37 374 aa5.36□□□□□ -1.55
CD44-219ENST00000525685 URB2Q14146 1524 aaKnown RBP5.36□□□□□ -1.55
CD44-219ENST00000525685 PRAMEF25A6NGN4 478 aa5.35□□□□□ -1.55
CD44-219ENST00000525685 GSG1L2A8MUP6 293 aa5.35□□□□□ -1.55
CD44-219ENST00000525685 C1QTNF3-AMACRE9PGA6 284 aa5.35□□□□□ -1.55
CD44-219ENST00000525685 CBX4O00257 560 aa5.35□□□□□ -1.55
CD44-219ENST00000525685 CLASP2O75122 1294 aaKnown RBP5.35□□□□□ -1.55
CD44-219ENST00000525685 CNOT4O95628 575 aaKnown RBP5.35□□□□□ -1.55
CD44-219ENST00000525685 STAT3P40763 770 aa5.35□□□□□ -1.55
CD44-219ENST00000525685 IRF9Q00978 393 aa5.35□□□□□ -1.55
CD44-219ENST00000525685 STRN3Q13033 797 aa5.35□□□□□ -1.55
CD44-219ENST00000525685 CIR1Q86X95 450 aaPredicted RBP5.35□□□□□ -1.55
CD44-219ENST00000525685 PASD1Q8IV76 773 aa5.35□□□□□ -1.55
CD44-219ENST00000525685 REXO1L1PQ8IX06 675 aa5.35□□□□□ -1.55
CD44-219ENST00000525685 NXPE1Q8N323 547 aa5.35□□□□□ -1.55
CD44-219ENST00000525685 CHST13Q8NET6 341 aa5.35□□□□□ -1.55
CD44-219ENST00000525685 DNERQ8NFT8 737 aa5.35□□□□□ -1.55
CD44-219ENST00000525685 ATL2Q8NHH9 583 aa5.35□□□□□ -1.55
CD44-219ENST00000525685 DVL3Q92997 716 aaPredicted RBP5.35□□□□□ -1.55
CD44-219ENST00000525685 CD248Q9HCU0 757 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms