RNA–Protein interactions for RNA: ENST00000525378.5

NDUFS3-204, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 779 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-204ENST00000525378 GINS2Q9Y248 185 aa13.35□□□□□ -0.27
NDUFS3-204ENST00000525378 HCN4Q9Y3Q4 1203 aa13.35□□□□□ -0.27
NDUFS3-204ENST00000525378 NOC2LQ9Y3T9 749 aaKnown RBP13.35□□□□□ -0.27
NDUFS3-204ENST00000525378 C19orf67A6NJJ6 358 aa13.34□□□□□ -0.27
NDUFS3-204ENST00000525378 ZBTB42B2RXF5 422 aa13.34□□□□□ -0.27
NDUFS3-204ENST00000525378 MBTPS2O43462 519 aa13.34□□□□□ -0.27
NDUFS3-204ENST00000525378 NCK2O43639 380 aa13.34□□□□□ -0.27
NDUFS3-204ENST00000525378 CDC45O75419 566 aa13.34□□□□□ -0.27
NDUFS3-204ENST00000525378 CYP3A4P08684 503 aa13.34□□□□□ -0.27
NDUFS3-204ENST00000525378 STAG3L1P0CL83 205 aa13.34□□□□□ -0.27
NDUFS3-204ENST00000525378 IBSPP21815 317 aaPredicted RBP13.34□□□□□ -0.27
NDUFS3-204ENST00000525378 IRS1P35568 1242 aa13.34□□□□□ -0.27
NDUFS3-204ENST00000525378 METAP2P50579 478 aaKnown RBP eCLIP13.34□□□□□ -0.27
NDUFS3-204ENST00000525378 RCAN1P53805 252 aa13.34□□□□□ -0.27
NDUFS3-204ENST00000525378 PKN1Q16512 942 aa13.34□□□□□ -0.27
NDUFS3-204ENST00000525378 FAM160B1Q5W0V3 765 aa13.34□□□□□ -0.27
NDUFS3-204ENST00000525378 SWSAP1Q6NVH7 229 aa13.34□□□□□ -0.27
NDUFS3-204ENST00000525378 PDXDC2PQ6P474 469 aa13.34□□□□□ -0.27
NDUFS3-204ENST00000525378 Q6ZUG5 572 aa13.34□□□□□ -0.27
NDUFS3-204ENST00000525378 KLHL23Q8NBE8 558 aa13.34□□□□□ -0.27
NDUFS3-204ENST00000525378 PPP1R16BQ96T49 567 aa13.34□□□□□ -0.27
NDUFS3-204ENST00000525378 ZMYND12Q9H0C1 365 aa13.34□□□□□ -0.27
NDUFS3-204ENST00000525378 COL1A2P08123 1366 aa13.33□□□□□ -0.27
NDUFS3-204ENST00000525378 ESYT2A0FGR8 921 aa13.33□□□□□ -0.28
NDUFS3-204ENST00000525378 IPO5O00410 1097 aaKnown RBP13.33□□□□□ -0.28
NDUFS3-204ENST00000525378 PPFIA3O75145 1194 aa13.33□□□□□ -0.28
NDUFS3-204ENST00000525378 RPS6KA5O75582 802 aa13.33□□□□□ -0.28
NDUFS3-204ENST00000525378 SARSP49591 514 aaKnown RBP13.33□□□□□ -0.28
NDUFS3-204ENST00000525378 FGD1P98174 961 aa13.33□□□□□ -0.28
NDUFS3-204ENST00000525378 ADAM15Q13444 863 aa13.33□□□□□ -0.28
NDUFS3-204ENST00000525378 NAALADL2Q58DX5 795 aa13.33□□□□□ -0.28
NDUFS3-204ENST00000525378 MIS18BP1Q6P0N0 1132 aa13.33□□□□□ -0.28
NDUFS3-204ENST00000525378 TRMT1LQ7Z2T5 733 aaKnown RBP13.33□□□□□ -0.28
NDUFS3-204ENST00000525378 ADHFE1Q8IWW8 467 aa13.33□□□□□ -0.28
NDUFS3-204ENST00000525378 RASGRP4Q8TDF6 673 aa13.33□□□□□ -0.28
NDUFS3-204ENST00000525378 POF1BQ8WVV4 589 aa13.33□□□□□ -0.28
NDUFS3-204ENST00000525378 KCNB2Q92953 911 aa13.33□□□□□ -0.28
NDUFS3-204ENST00000525378 BRF1Q92994 677 aa13.33□□□□□ -0.28
NDUFS3-204ENST00000525378 ZNF577Q9BSK1 485 aa13.33□□□□□ -0.28
NDUFS3-204ENST00000525378 PRKAG3Q9UGI9 489 aa13.33□□□□□ -0.28
NDUFS3-204ENST00000525378 LRFN2Q9ULH4 789 aa13.33□□□□□ -0.28
NDUFS3-204ENST00000525378 FAM50BQ9Y247 325 aa13.33□□□□□ -0.28
NDUFS3-204ENST00000525378 ARIH1Q9Y4X5 557 aaPredicted RBP13.33□□□□□ -0.28
NDUFS3-204ENST00000525378 PCDHGC5Q9Y5F6 944 aa13.33□□□□□ -0.28
NDUFS3-204ENST00000525378 PRR33A8MZF0 331 aa13.32□□□□□ -0.28
NDUFS3-204ENST00000525378 PRPF3O43395 683 aaKnown RBP13.32□□□□□ -0.28
NDUFS3-204ENST00000525378 C22orf31O95567 290 aa13.32□□□□□ -0.28
NDUFS3-204ENST00000525378 HMGB1P09429 215 aaKnown RBP13.32□□□□□ -0.28
NDUFS3-204ENST00000525378 ALADP13716 330 aa13.32□□□□□ -0.28
NDUFS3-204ENST00000525378 SMAD2Q15796 467 aaKnown RBP13.32□□□□□ -0.28
NDUFS3-204ENST00000525378 ZNF484Q5JVG2 852 aa13.32□□□□□ -0.28
NDUFS3-204ENST00000525378 FAM102BQ5T8I3 360 aa13.32□□□□□ -0.28
NDUFS3-204ENST00000525378 CKAP2LQ8IYA6 745 aa13.32□□□□□ -0.28
NDUFS3-204ENST00000525378 PHKBQ93100 1093 aa13.32□□□□□ -0.28
NDUFS3-204ENST00000525378 JAKMIP1Q96N16 626 aaKnown RBP13.32□□□□□ -0.28
NDUFS3-204ENST00000525378 OSMRQ99650 979 aa13.32□□□□□ -0.28
NDUFS3-204ENST00000525378 ADAM2Q99965 735 aa13.32□□□□□ -0.28
NDUFS3-204ENST00000525378 HCSTQ9UBK5 93 aa13.32□□□□□ -0.28
NDUFS3-204ENST00000525378 ST3GAL5Q9UNP4 418 aa13.32□□□□□ -0.28
NDUFS3-204ENST00000525378 PCDHB7Q9Y5E2 793 aa13.32□□□□□ -0.28
NDUFS3-204ENST00000525378 MAFBQ9Y5Q3 323 aaPredicted RBP13.32□□□□□ -0.28
NDUFS3-204ENST00000525378 SNX14Q9Y5W7 946 aa13.32□□□□□ -0.28
NDUFS3-204ENST00000525378 C5orf42Q9H799 3197 aa13.32□□□□□ -0.28
NDUFS3-204ENST00000525378 NID2Q14112 1375 aa13.32□□□□□ -0.28
NDUFS3-204ENST00000525378 CCDC196A0A1B0GTZ2 297 aa13.31□□□□□ -0.28
NDUFS3-204ENST00000525378 C9IYK1 514 aa13.31□□□□□ -0.28
NDUFS3-204ENST00000525378 DCXO43602 365 aa13.31□□□□□ -0.28
NDUFS3-204ENST00000525378 EDIL3O43854 480 aa13.31□□□□□ -0.28
NDUFS3-204ENST00000525378 GPR32O75388 356 aa13.31□□□□□ -0.28
NDUFS3-204ENST00000525378 VTNP04004 478 aa13.31□□□□□ -0.28
NDUFS3-204ENST00000525378 NDUFV1P49821 464 aa13.31□□□□□ -0.28
NDUFS3-204ENST00000525378 SETQ01105 290 aaPredicted RBP13.31□□□□□ -0.28
NDUFS3-204ENST00000525378 SMAD4Q13485 552 aaKnown RBP13.31□□□□□ -0.28
NDUFS3-204ENST00000525378 NTRK3Q16288 839 aa13.31□□□□□ -0.28
NDUFS3-204ENST00000525378 KIZQ2M2Z5 673 aa13.31□□□□□ -0.28
NDUFS3-204ENST00000525378 ZNF746Q6NUN9 644 aaPredicted RBP13.31□□□□□ -0.28
NDUFS3-204ENST00000525378 FAM228AQ86W67 206 aa13.31□□□□□ -0.28
NDUFS3-204ENST00000525378 REXO1Q8N1G1 1221 aaKnown RBP13.31□□□□□ -0.28
NDUFS3-204ENST00000525378 BBXQ8WY36 941 aaPredicted RBP13.31□□□□□ -0.28
NDUFS3-204ENST00000525378 MSLNLQ96KJ4 702 aa13.31□□□□□ -0.28
NDUFS3-204ENST00000525378 C6orf50Q9HD87 102 aa13.31□□□□□ -0.28
NDUFS3-204ENST00000525378 RGS18Q9NS28 235 aa13.31□□□□□ -0.28
NDUFS3-204ENST00000525378 TBC1D22BQ9NU19 505 aa13.31□□□□□ -0.28
NDUFS3-204ENST00000525378 GABBR1Q9UBS5 961 aa13.31□□□□□ -0.28
NDUFS3-204ENST00000525378 CD207Q9UJ71 328 aa13.31□□□□□ -0.28
NDUFS3-204ENST00000525378 DENND3A2RUS2 1198 aa13.3□□□□□ -0.28
NDUFS3-204ENST00000525378 TBKBP1A7MCY6 615 aa13.3□□□□□ -0.28
NDUFS3-204ENST00000525378 GPR182O15218 404 aa13.3□□□□□ -0.28
NDUFS3-204ENST00000525378 GLP2RO95838 553 aa13.3□□□□□ -0.28
NDUFS3-204ENST00000525378 HOXD11P31277 338 aaPredicted RBP13.3□□□□□ -0.28
NDUFS3-204ENST00000525378 CIITAP33076 1130 aa13.3□□□□□ -0.28
NDUFS3-204ENST00000525378 HSPA4P34932 840 aa13.3□□□□□ -0.28
NDUFS3-204ENST00000525378 NRIP1P48552 1158 aa13.3□□□□□ -0.28
NDUFS3-204ENST00000525378 PRR16Q569H4 304 aa13.3□□□□□ -0.28
NDUFS3-204ENST00000525378 BLOC1S2Q6QNY1 142 aa13.3□□□□□ -0.28
NDUFS3-204ENST00000525378 SLC24A5Q71RS6 500 aa13.3□□□□□ -0.28
NDUFS3-204ENST00000525378 RBM23Q86U06 439 aaKnown RBP13.3□□□□□ -0.28
NDUFS3-204ENST00000525378 METTL13Q8N6R0 699 aa13.3□□□□□ -0.28
NDUFS3-204ENST00000525378 CCDC12Q8WUD4 166 aaPredicted RBP13.3□□□□□ -0.28
NDUFS3-204ENST00000525378 LENG9Q96B70 501 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms