RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 NOC2LQ9Y3T9 749 aaKnown RBP27.28■■□□□ 1.96
USP47-205ENST00000525257 PCDHB7Q9Y5E2 793 aa27.28■■□□□ 1.96
USP47-205ENST00000525257 FNDC1Q4ZHG4 1894 aaPredicted RBP27.27■■□□□ 1.96
USP47-205ENST00000525257 HBP1O60381 514 aa27.27■■□□□ 1.96
USP47-205ENST00000525257 RPS6KA5O75582 802 aa27.27■■□□□ 1.96
USP47-205ENST00000525257 AP3B2Q13367 1082 aa27.27■■□□□ 1.96
USP47-205ENST00000525257 SPOUT1Q5T280 376 aaKnown RBP27.27■■□□□ 1.96
USP47-205ENST00000525257 ABHD15Q6UXT9 468 aa27.27■■□□□ 1.96
USP47-205ENST00000525257 TEX2Q8IWB9 1127 aa27.27■■□□□ 1.96
USP47-205ENST00000525257 ATP8B4Q8TF62 1192 aa27.27■■□□□ 1.96
USP47-205ENST00000525257 FBXL18Q96ME1 805 aa27.27■■□□□ 1.96
USP47-205ENST00000525257 NEK1Q96PY6 1258 aa27.27■■□□□ 1.96
USP47-205ENST00000525257 BARHL2Q9NY43 387 aa27.27■■□□□ 1.96
USP47-205ENST00000525257 EVPLQ92817 2033 aa27.26■■□□□ 1.95
USP47-205ENST00000525257 DENND3A2RUS2 1198 aa27.26■■□□□ 1.95
USP47-205ENST00000525257 hCG_1984214I3L0E3 225 aa27.26■■□□□ 1.95
USP47-205ENST00000525257 EYA4O95677 639 aa27.26■■□□□ 1.95
USP47-205ENST00000525257 CLK2P49760 499 aaKnown RBP27.26■■□□□ 1.95
USP47-205ENST00000525257 RNF20Q5VTR2 975 aa27.26■■□□□ 1.95
USP47-205ENST00000525257 KIAA0319LQ8IZA0 1049 aa27.26■■□□□ 1.95
USP47-205ENST00000525257 ZNF713Q8N859 430 aaPredicted RBP27.26■■□□□ 1.95
USP47-205ENST00000525257 TMEM40Q8WWA1 233 aa27.26■■□□□ 1.95
USP47-205ENST00000525257 PPP1R16BQ96T49 567 aa27.26■■□□□ 1.95
USP47-205ENST00000525257 ZNF302Q9NR11 478 aa27.26■■□□□ 1.95
USP47-205ENST00000525257 BARX2Q9UMQ3 279 aaPredicted RBP27.26■■□□□ 1.95
USP47-205ENST00000525257 ZNF318Q5VUA4 2279 aa27.26■■□□□ 1.95
USP47-205ENST00000525257 COL1A2P08123 1366 aa27.25■■□□□ 1.95
USP47-205ENST00000525257 GOLGA8AA7E2F4 631 aa27.25■■□□□ 1.95
USP47-205ENST00000525257 TBKBP1A7MCY6 615 aa27.25■■□□□ 1.95
USP47-205ENST00000525257 GOLGA8BA8MQT2 603 aa27.25■■□□□ 1.95
USP47-205ENST00000525257 GLP2RO95838 553 aa27.25■■□□□ 1.95
USP47-205ENST00000525257 PDXDC2PQ6P474 469 aa27.25■■□□□ 1.95
USP47-205ENST00000525257 PLA2G4DQ86XP0 818 aa27.25■■□□□ 1.95
USP47-205ENST00000525257 SMRP1Q8NCR6 262 aa27.25■■□□□ 1.95
USP47-205ENST00000525257 ADAM2Q99965 735 aa27.25■■□□□ 1.95
USP47-205ENST00000525257 PCDHB12Q9Y5F1 795 aa27.25■■□□□ 1.95
USP47-205ENST00000525257 FAM86B1E9PN63 330 aa27.24■■□□□ 1.95
USP47-205ENST00000525257 FAM86B2P0C5J1 330 aa27.24■■□□□ 1.95
USP47-205ENST00000525257 EXOSC10Q01780 885 aaKnown RBP27.24■■□□□ 1.95
USP47-205ENST00000525257 NHLH1Q02575 133 aa27.24■■□□□ 1.95
USP47-205ENST00000525257 ZNF484Q5JVG2 852 aa27.24■■□□□ 1.95
USP47-205ENST00000525257 FAM102BQ5T8I3 360 aa27.24■■□□□ 1.95
USP47-205ENST00000525257 JAKMIP3Q5VZ66 844 aa27.24■■□□□ 1.95
USP47-205ENST00000525257 NIPA1Q7RTP0 329 aa27.24■■□□□ 1.95
USP47-205ENST00000525257 MICAL1Q8TDZ2 1067 aa27.24■■□□□ 1.95
USP47-205ENST00000525257 RGS18Q9NS28 235 aa27.24■■□□□ 1.95
USP47-205ENST00000525257 HCSTQ9UBK5 93 aa27.24■■□□□ 1.95
USP47-205ENST00000525257 ST3GAL5Q9UNP4 418 aa27.24■■□□□ 1.95
USP47-205ENST00000525257 KLF18A0A0U1RQI7 1052 aa27.23■■□□□ 1.95
USP47-205ENST00000525257 COASYQ13057 564 aa27.23■■□□□ 1.95
USP47-205ENST00000525257 SWSAP1Q6NVH7 229 aa27.23■■□□□ 1.95
USP47-205ENST00000525257 MIS18BP1Q6P0N0 1132 aa27.23■■□□□ 1.95
USP47-205ENST00000525257 MFSD14AQ96MC6 490 aa27.23■■□□□ 1.95
USP47-205ENST00000525257 GLT8D2Q9H1C3 349 aa27.23■■□□□ 1.95
USP47-205ENST00000525257 KCNH6Q9H252 994 aa27.23■■□□□ 1.95
USP47-205ENST00000525257 TLE6Q9H808 572 aa27.23■■□□□ 1.95
USP47-205ENST00000525257 C1orf112Q9NSG2 853 aa27.23■■□□□ 1.95
USP47-205ENST00000525257 TECTAO75443 2155 aa27.23■■□□□ 1.95
USP47-205ENST00000525257 ZBTB42B2RXF5 422 aa27.22■■□□□ 1.95
USP47-205ENST00000525257 PER2O15055 1255 aa27.22■■□□□ 1.95
USP47-205ENST00000525257 DHX15O43143 795 aaKnown RBP27.22■■□□□ 1.95
USP47-205ENST00000525257 ATP4AP20648 1035 aa27.22■■□□□ 1.95
USP47-205ENST00000525257 CDC27P30260 824 aa27.22■■□□□ 1.95
USP47-205ENST00000525257 KIZQ2M2Z5 673 aa27.22■■□□□ 1.95
USP47-205ENST00000525257 SLC24A5Q71RS6 500 aa27.22■■□□□ 1.95
USP47-205ENST00000525257 DHX32Q7L7V1 743 aaKnown RBP27.22■■□□□ 1.95
USP47-205ENST00000525257 CKAP2LQ8IYA6 745 aa27.22■■□□□ 1.95
USP47-205ENST00000525257 EDAQ92838 391 aa27.22■■□□□ 1.95
USP47-205ENST00000525257 OSMRQ99650 979 aa27.22■■□□□ 1.95
USP47-205ENST00000525257 TLR9Q9NR96 1032 aa27.22■■□□□ 1.95
USP47-205ENST00000525257 AAASQ9NRG9 546 aa27.22■■□□□ 1.95
USP47-205ENST00000525257 FAM217BQ9NTX9 383 aaPredicted RBP27.22■■□□□ 1.95
USP47-205ENST00000525257 NAP1L2Q9ULW6 460 aaPredicted RBP27.22■■□□□ 1.95
USP47-205ENST00000525257 USP15Q9Y4E8 981 aaPredicted RBP27.22■■□□□ 1.95
USP47-205ENST00000525257 IGLV3-22A0A075B6J6 115 aa27.21■■□□□ 1.95
USP47-205ENST00000525257 C9IYK1 514 aa27.21■■□□□ 1.95
USP47-205ENST00000525257 IPO5O00410 1097 aaKnown RBP27.21■■□□□ 1.95
USP47-205ENST00000525257 GPR182O15218 404 aa27.21■■□□□ 1.95
USP47-205ENST00000525257 MRE11P49959 708 aa27.21■■□□□ 1.95
USP47-205ENST00000525257 RBM10P98175 930 aaKnown RBP27.21■■□□□ 1.95
USP47-205ENST00000525257 UBE3AQ05086 875 aa27.21■■□□□ 1.95
USP47-205ENST00000525257 ADCK5Q3MIX3 580 aa27.21■■□□□ 1.95
USP47-205ENST00000525257 ODR4Q5SWX8 454 aa27.21■■□□□ 1.95
USP47-205ENST00000525257 TRMT1LQ7Z2T5 733 aaKnown RBP27.21■■□□□ 1.95
USP47-205ENST00000525257 RNF216Q9NWF9 866 aaPredicted RBP27.21■■□□□ 1.95
USP47-205ENST00000525257 FGF18O76093 207 aa27.2■■□□□ 1.94
USP47-205ENST00000525257 C22orf31O95567 290 aa27.2■■□□□ 1.94
USP47-205ENST00000525257 VTNP04004 478 aa27.2■■□□□ 1.94
USP47-205ENST00000525257 FGFR1P11362 822 aa27.2■■□□□ 1.94
USP47-205ENST00000525257 FAM228AQ86W67 206 aa27.2■■□□□ 1.94
USP47-205ENST00000525257 THNSL1Q8IYQ7 743 aa27.2■■□□□ 1.94
USP47-205ENST00000525257 RASEFQ8IZ41 740 aa27.2■■□□□ 1.94
USP47-205ENST00000525257 COLGALT1Q8NBJ5 622 aa27.2■■□□□ 1.94
USP47-205ENST00000525257 ZNF577Q9BSK1 485 aa27.2■■□□□ 1.94
USP47-205ENST00000525257 TYW1Q9NV66 732 aaKnown RBP27.2■■□□□ 1.94
USP47-205ENST00000525257 MYH9P35579 1960 aaKnown RBP27.2■■□□□ 1.94
USP47-205ENST00000525257 LOC730098B7Z3J9 87 aa27.19■■□□□ 1.94
USP47-205ENST00000525257 CRYBB1P53674 252 aaPredicted RBP27.19■■□□□ 1.94
USP47-205ENST00000525257 ERVFC1P60507 584 aa27.19■■□□□ 1.94
USP47-205ENST00000525257 FAM43BQ6ZT52 329 aaPredicted RBP27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms