RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 HIP1RO75146 1068 aa7.78□□□□□ -1.16
COPB1-203ENST00000525214 ASMTLO95671 621 aa7.78□□□□□ -1.16
COPB1-203ENST00000525214 ASLP04424 464 aa7.78□□□□□ -1.16
COPB1-203ENST00000525214 EIF4HQ15056 248 aaKnown RBP7.78□□□□□ -1.16
COPB1-203ENST00000525214 TBR1Q16650 682 aa7.78□□□□□ -1.16
COPB1-203ENST00000525214 RNF151Q2KHN1 245 aa7.78□□□□□ -1.16
COPB1-203ENST00000525214 DDX53Q86TM3 631 aaKnown RBP7.78□□□□□ -1.16
COPB1-203ENST00000525214 RTN4RL1Q86UN2 441 aaPredicted RBP7.78□□□□□ -1.16
COPB1-203ENST00000525214 CHST14Q8NCH0 376 aa7.78□□□□□ -1.16
COPB1-203ENST00000525214 HIPK4Q8NE63 616 aa7.78□□□□□ -1.16
COPB1-203ENST00000525214 DVL3Q92997 716 aaPredicted RBP7.78□□□□□ -1.16
COPB1-203ENST00000525214 FOXRED1Q96CU9 486 aaPredicted RBP7.78□□□□□ -1.16
COPB1-203ENST00000525214 LRRC37BQ96QE4 947 aa7.78□□□□□ -1.16
COPB1-203ENST00000525214 LMF1Q96S06 567 aa7.78□□□□□ -1.16
COPB1-203ENST00000525214 FBXO10Q9UK96 956 aa7.78□□□□□ -1.16
COPB1-203ENST00000525214 MYRFQ9Y2G1 1151 aa7.78□□□□□ -1.16
COPB1-203ENST00000525214 B4E1Z4 1266 aa7.77□□□□□ -1.17
COPB1-203ENST00000525214 OPA1O60313 960 aa7.77□□□□□ -1.17
COPB1-203ENST00000525214 KRT37O76014 449 aa7.77□□□□□ -1.17
COPB1-203ENST00000525214 KCNQ1P51787 676 aa7.77□□□□□ -1.17
COPB1-203ENST00000525214 NOLC1Q14978 699 aaKnown RBP eCLIP7.77□□□□□ -1.176e-13■■■■□ 25.3
COPB1-203ENST00000525214 TMEM200BQ69YZ2 307 aa7.77□□□□□ -1.17
COPB1-203ENST00000525214 TCTN3Q6NUS6 607 aa7.77□□□□□ -1.17
COPB1-203ENST00000525214 CC2D1AQ6P1N0 951 aaPredicted RBP7.77□□□□□ -1.17
COPB1-203ENST00000525214 NEIL1Q96FI4 390 aaPredicted RBP7.77□□□□□ -1.17
COPB1-203ENST00000525214 BORCS6Q96GS4 357 aa7.77□□□□□ -1.17
COPB1-203ENST00000525214 RNPC3Q96LT9 517 aaKnown RBP7.77□□□□□ -1.17
COPB1-203ENST00000525214 KIAA1683Q9H0B3 1180 aa7.77□□□□□ -1.17
COPB1-203ENST00000525214 CDC42EP3Q9UKI2 254 aa7.77□□□□□ -1.17
COPB1-203ENST00000525214 MATN2O00339 956 aa7.76□□□□□ -1.17
COPB1-203ENST00000525214 FOXS1O43638 330 aa7.76□□□□□ -1.17
COPB1-203ENST00000525214 HMGCRP04035 888 aa7.76□□□□□ -1.17
COPB1-203ENST00000525214 PABPC4Q13310 644 aaKnown RBP eCLIP7.76□□□□□ -1.171e-9■■□□□ 12.2
COPB1-203ENST00000525214 PUM1Q14671 1186 aaKnown RBP eCLIP7.76□□□□□ -1.17
COPB1-203ENST00000525214 ARHGAP44Q17R89 818 aa7.76□□□□□ -1.17
COPB1-203ENST00000525214 TRIM68Q6AZZ1 485 aa7.76□□□□□ -1.17
COPB1-203ENST00000525214 RFPL3O75679 317 aa7.75□□□□□ -1.17
COPB1-203ENST00000525214 MOGSQ13724 837 aa7.75□□□□□ -1.17
COPB1-203ENST00000525214 ZMAT1Q5H9K5 638 aa7.75□□□□□ -1.17
COPB1-203ENST00000525214 PIK3R6Q5UE93 754 aa7.75□□□□□ -1.17
COPB1-203ENST00000525214 OTOP2Q7RTS6 562 aa7.75□□□□□ -1.17
COPB1-203ENST00000525214 Q8TCH9 128 aa7.75□□□□□ -1.17
COPB1-203ENST00000525214 ERCC4Q92889 916 aaPredicted RBP7.75□□□□□ -1.17
COPB1-203ENST00000525214 SCYL1Q96KG9 808 aa7.75□□□□□ -1.17
COPB1-203ENST00000525214 KRTAP4-5Q9BYR2 181 aa7.75□□□□□ -1.17
COPB1-203ENST00000525214 KLC2Q9H0B6 622 aa7.75□□□□□ -1.17
COPB1-203ENST00000525214 A0A0G2JNJ9 132 aa7.74□□□□□ -1.17
COPB1-203ENST00000525214 PTPDC1A2A3K4 754 aa7.74□□□□□ -1.17
COPB1-203ENST00000525214 ZNF623O75123 536 aa7.74□□□□□ -1.17
COPB1-203ENST00000525214 KIF11P52732 1056 aa7.74□□□□□ -1.17
COPB1-203ENST00000525214 ALDH6A1Q02252 535 aaKnown RBP7.74□□□□□ -1.17
COPB1-203ENST00000525214 R3HDM1Q15032 1099 aaKnown RBP7.74□□□□□ -1.17
COPB1-203ENST00000525214 PCOLCEQ15113 449 aa7.74□□□□□ -1.17
COPB1-203ENST00000525214 GRAMD4Q6IC98 578 aa7.74□□□□□ -1.17
COPB1-203ENST00000525214 ZNF585AQ6P3V2 769 aa7.74□□□□□ -1.17
COPB1-203ENST00000525214 TAX1BP1Q86VP1 789 aa7.74□□□□□ -1.17
COPB1-203ENST00000525214 BCL6BQ8N143 479 aaPredicted RBP7.74□□□□□ -1.17
COPB1-203ENST00000525214 Q9UFV3 132 aa7.74□□□□□ -1.17
COPB1-203ENST00000525214 TSC22D4Q9Y3Q8 395 aa7.74□□□□□ -1.17
COPB1-203ENST00000525214 FAM83GA6ND36 823 aa7.73□□□□□ -1.17
COPB1-203ENST00000525214 CBX4O00257 560 aa7.73□□□□□ -1.17
COPB1-203ENST00000525214 MATN3O15232 486 aa7.73□□□□□ -1.17
COPB1-203ENST00000525214 MAFO75444 373 aaPredicted RBP7.73□□□□□ -1.17
COPB1-203ENST00000525214 JMJD7P0C870 316 aa7.73□□□□□ -1.17
COPB1-203ENST00000525214 TNFRSF1AP19438 455 aa7.73□□□□□ -1.17
COPB1-203ENST00000525214 FNTBP49356 437 aa7.73□□□□□ -1.17
COPB1-203ENST00000525214 RAC3P60763 192 aa7.73□□□□□ -1.17
COPB1-203ENST00000525214 NFYCQ13952 458 aa7.73□□□□□ -1.17
COPB1-203ENST00000525214 ZNF568Q3ZCX4 644 aa7.73□□□□□ -1.17
COPB1-203ENST00000525214 AGBL4Q5VU57 503 aa7.73□□□□□ -1.17
COPB1-203ENST00000525214 CREB3L3Q68CJ9 461 aa7.73□□□□□ -1.17
COPB1-203ENST00000525214 NPM2Q86SE8 214 aaKnown RBP7.73□□□□□ -1.17
COPB1-203ENST00000525214 CFHR4Q92496 578 aa7.73□□□□□ -1.17
COPB1-203ENST00000525214 FOXB1Q99853 325 aa7.73□□□□□ -1.17
COPB1-203ENST00000525214 OAZ3Q9UMX2 235 aa7.73□□□□□ -1.17
COPB1-203ENST00000525214 CD2APQ9Y5K6 639 aa7.73□□□□□ -1.17
COPB1-203ENST00000525214 ARHGAP6O43182 974 aa7.72□□□□□ -1.17
COPB1-203ENST00000525214 STAT5BP51692 787 aa7.72□□□□□ -1.17
COPB1-203ENST00000525214 DUSP8Q13202 625 aa7.72□□□□□ -1.17
COPB1-203ENST00000525214 TKFCQ3LXA3 575 aa7.72□□□□□ -1.17
COPB1-203ENST00000525214 CDCA2Q69YH5 1023 aaPredicted RBP7.72□□□□□ -1.17
COPB1-203ENST00000525214 FILIP1Q7Z7B0 1213 aa7.72□□□□□ -1.17
COPB1-203ENST00000525214 WDR48Q8TAF3 677 aa7.72□□□□□ -1.17
COPB1-203ENST00000525214 CALML6Q8TD86 181 aa7.72□□□□□ -1.17
COPB1-203ENST00000525214 DPYSL5Q9BPU6 564 aa7.72□□□□□ -1.17
COPB1-203ENST00000525214 B4GALT6Q9UBX8 382 aa7.72□□□□□ -1.17
COPB1-203ENST00000525214 ZFR2Q9UPR6 939 aaKnown RBP7.72□□□□□ -1.17
COPB1-203ENST00000525214 NR2E1Q9Y466 385 aa7.72□□□□□ -1.17
COPB1-203ENST00000525214 PRLP01236 227 aa7.71□□□□□ -1.18
COPB1-203ENST00000525214 APEX1P27695 318 aaKnown RBP7.71□□□□□ -1.18
COPB1-203ENST00000525214 SELENOPP49908 381 aa7.71□□□□□ -1.18
COPB1-203ENST00000525214 MRE11P49959 708 aa7.71□□□□□ -1.18
COPB1-203ENST00000525214 C21orf62-AS1Q17RA5 79 aa7.71□□□□□ -1.18
COPB1-203ENST00000525214 USP30Q70CQ3 517 aa7.71□□□□□ -1.18
COPB1-203ENST00000525214 FUKQ8N0W3 1084 aa7.71□□□□□ -1.18
COPB1-203ENST00000525214 SYNPOQ8N3V7 929 aa7.71□□□□□ -1.18
COPB1-203ENST00000525214 GIMAP8Q8ND71 665 aaPredicted RBP7.71□□□□□ -1.18
COPB1-203ENST00000525214 DEF6Q9H4E7 631 aa7.71□□□□□ -1.18
COPB1-203ENST00000525214 CABP5Q9NP86 173 aa7.71□□□□□ -1.18
COPB1-203ENST00000525214 MAGEC2Q9UBF1 373 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms