RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 KRT76Q01546 638 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 PRKCEQ02156 737 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 ORC2Q13416 577 aaPredicted RBP7.28□□□□□ -1.24
CD44-214ENST00000525211 DRP2Q13474 957 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 TARBP2Q15633 366 aaKnown RBP7.28□□□□□ -1.24
CD44-214ENST00000525211 LRRC26Q2I0M4 334 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 TMEM119Q4V9L6 283 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 NAALADL2Q58DX5 795 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 ARL6IP4Q66PJ3 421 aaKnown RBP7.28□□□□□ -1.24
CD44-214ENST00000525211 GDF6Q6KF10 455 aaPredicted RBP7.28□□□□□ -1.24
CD44-214ENST00000525211 PDXDC2PQ6P474 469 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 RUFY4Q6ZNE9 571 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 CLEC17AQ6ZS10 378 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 ANO5Q75V66 913 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 CABP7Q86V35 215 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 TPH2Q8IWU9 490 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 SLFN12Q8IYM2 578 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 GRAMD1CQ8IYS0 662 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 SNX29Q8TEQ0 813 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 DHX38Q92620 1227 aaKnown RBP7.28□□□□□ -1.24
CD44-214ENST00000525211 SPATA32Q96LK8 384 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 NAP1L4Q99733 375 aaKnown RBP7.28□□□□□ -1.24
CD44-214ENST00000525211 LXNQ9BS40 222 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 SENP6Q9GZR1 1112 aaPredicted RBP7.28□□□□□ -1.24
CD44-214ENST00000525211 ZNF302Q9NR11 478 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 SETD4Q9NVD3 440 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 HDAC6Q9UBN7 1215 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 LRWD1Q9UFC0 647 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 PCDHA10Q9Y5I2 948 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 MORC2Q9Y6X9 1032 aaPredicted RBP7.28□□□□□ -1.24
CD44-214ENST00000525211 TRIP12Q14669 1992 aaPredicted RBP7.28□□□□□ -1.24
CD44-214ENST00000525211 EMSYQ7Z589 1322 aa7.27□□□□□ -1.24
CD44-214ENST00000525211 DDX11L8A8MPP1 907 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 H3BRB1 525 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 DNM1LO00429 736 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 NOP56O00567 594 aaKnown RBP7.27□□□□□ -1.25
CD44-214ENST00000525211 BACH1O14867 736 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 TREHO43280 583 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 PPFIA4O75335 1185 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 P4HBP07237 508 aaKnown RBP7.27□□□□□ -1.25
CD44-214ENST00000525211 PSAPP07602 524 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 SMIM10L2AP0DMW4 78 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 SMIM10L2BP0DMW5 78 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 INSRRP14616 1297 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 PLCG1P19174 1290 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 HOXC8P31273 242 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 CCT6AP40227 531 aaKnown RBP7.27□□□□□ -1.25
CD44-214ENST00000525211 ME1P48163 572 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 CDK7P50613 346 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 NDUFA8P51970 172 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 JAK3P52333 1124 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 IGBP1P78318 339 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 ADAM17P78536 824 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 ITGA7Q13683 1181 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 PDIA5Q14554 519 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 MCM6Q14566 821 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 ZRSR1Q15695 479 aaKnown RBP7.27□□□□□ -1.25
CD44-214ENST00000525211 DGKDQ16760 1214 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 KIAA0753Q2KHM9 967 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 HYIQ5T013 277 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 RESP18Q5W5W9 173 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 MIS18BP1Q6P0N0 1132 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 SH3RF1Q7Z6J0 888 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 PDILTQ8N807 584 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 SLC43A3Q8NBI5 491 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 AFAP1L1Q8TED9 768 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 STAMQ92783 540 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 ZNF668Q96K58 619 aaPredicted RBP7.27□□□□□ -1.25
CD44-214ENST00000525211 MTG1Q9BT17 334 aaPredicted RBP7.27□□□□□ -1.25
CD44-214ENST00000525211 POLR3CQ9BUI4 534 aaPredicted RBP7.27□□□□□ -1.25
CD44-214ENST00000525211 TRPV6Q9H1D0 765 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 TUT1Q9H6E5 874 aaKnown RBP7.27□□□□□ -1.25
CD44-214ENST00000525211 LMBRD1Q9NUN5 540 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 TRMT13Q9NUP7 481 aaKnown RBP7.27□□□□□ -1.25
CD44-214ENST00000525211 HPSEQ9Y251 543 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 SAMM50Q9Y512 469 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 TNRC18O15417 2968 aaPredicted RBP7.27□□□□□ -1.25
CD44-214ENST00000525211 PDE4DIPQ5VU43 2346 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 ALPK3Q96L96 1907 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 UMODL1Q5DID0 1318 aa7.27□□□□□ -1.25
CD44-214ENST00000525211 LAD1O00515 517 aa7.26□□□□□ -1.25
CD44-214ENST00000525211 MSCO60682 206 aa7.26□□□□□ -1.25
CD44-214ENST00000525211 CUTAO60888 179 aa7.26□□□□□ -1.25
CD44-214ENST00000525211 PRPF40AO75400 957 aaKnown RBP7.26□□□□□ -1.25
CD44-214ENST00000525211 CYP2C9P11712 490 aa7.26□□□□□ -1.25
CD44-214ENST00000525211 PFKFB1P16118 471 aa7.26□□□□□ -1.25
CD44-214ENST00000525211 ITGB8P26012 769 aa7.26□□□□□ -1.25
CD44-214ENST00000525211 RPA1P27694 616 aa7.26□□□□□ -1.25
CD44-214ENST00000525211 LONP1P36776 959 aaKnown RBP7.26□□□□□ -1.25
CD44-214ENST00000525211 QARSP47897 775 aaKnown RBP7.26□□□□□ -1.25
CD44-214ENST00000525211 CPT1AP50416 773 aa7.26□□□□□ -1.25
CD44-214ENST00000525211 PSMC5P62195 406 aa7.26□□□□□ -1.25
CD44-214ENST00000525211 TCTN1Q2MV58 587 aa7.26□□□□□ -1.25
CD44-214ENST00000525211 TRIM71Q2Q1W2 868 aaKnown RBP7.26□□□□□ -1.25
CD44-214ENST00000525211 TRIM60Q495X7 471 aa7.26□□□□□ -1.25
CD44-214ENST00000525211 MTERF2Q49AM1 385 aa7.26□□□□□ -1.25
CD44-214ENST00000525211 ARSHQ5FYA8 562 aa7.26□□□□□ -1.25
CD44-214ENST00000525211 ATL3Q6DD88 541 aa7.26□□□□□ -1.25
CD44-214ENST00000525211 SLC39A5Q6ZMH5 540 aa7.26□□□□□ -1.25
CD44-214ENST00000525211 NUDT18Q6ZVK8 323 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms