RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 DCDC2CA8MYV0 355 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 B8ZZF3 427 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 F6X3S4 739 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 CAPN9O14815 690 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 CLTBP09497 229 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 SP9P0CG40 484 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 HCLS1P14317 486 aaPredicted RBP4.26□□□□□ -1.73
CSDE1-209ENST00000525132 RAB6AP20340 208 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 ERCC5P28715 1186 aaPredicted RBP4.26□□□□□ -1.73
CSDE1-209ENST00000525132 CRKP46108 304 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 RACK1P63244 317 aaKnown RBP4.26□□□□□ -1.73
CSDE1-209ENST00000525132 TAP1Q03518 808 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 RAD51AP2Q09MP3 1159 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 KIAA2012Q0VF49 1180 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 PWP1Q13610 501 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 MAP7Q14244 749 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 SF3A1Q15459 793 aaKnown RBP4.26□□□□□ -1.73
CSDE1-209ENST00000525132 NKG7Q16617 165 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 PTPN21Q16825 1174 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 RGL3Q3MIN7 710 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 TMEM201Q5SNT2 666 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 C12orf40Q86WS4 652 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 SRRM1Q8IYB3 904 aaKnown RBP4.26□□□□□ -1.73
CSDE1-209ENST00000525132 USHBP1Q8N6Y0 703 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 LSM14AQ8ND56 463 aaKnown RBP4.26□□□□□ -1.73
CSDE1-209ENST00000525132 GDPD5Q8WTR4 605 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 MIR1-1HGQ9H1L0 117 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 KIAA1217Q5T5P2 1943 aa4.26□□□□□ -1.73
CSDE1-209ENST00000525132 USP9YO00507 2555 aaPredicted RBP4.25□□□□□ -1.73
CSDE1-209ENST00000525132 CGNL1Q0VF96 1302 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 FAM221BA6H8Z2 402 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 FAM170BA6NMN3 283 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 KINO60870 393 aaKnown RBP4.25□□□□□ -1.73
CSDE1-209ENST00000525132 DNAJA2O60884 412 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 TGFB1P01137 390 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 PRNPP04156 253 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 CSF2RAP15509 400 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 CCND3P30281 292 aaPredicted RBP4.25□□□□□ -1.73
CSDE1-209ENST00000525132 USP11P51784 963 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 ZNF280AP59817 542 aaPredicted RBP4.25□□□□□ -1.73
CSDE1-209ENST00000525132 HDLBPQ00341 1268 aaKnown RBP4.25□□□□□ -1.73
CSDE1-209ENST00000525132 HNRNPUQ00839 825 aaKnown RBP eCLIP4.25□□□□□ -1.73
CSDE1-209ENST00000525132 MPP2Q14168 576 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 SNX17Q15036 470 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 TMEM67Q5HYA8 995 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 MAP3K21Q5TCX8 1036 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 OGFOD3Q6PK18 319 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 PAOXQ6QHF9 649 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 HS2ST1Q7LGA3 356 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 DTX1Q86Y01 620 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 MRPL41Q8IXM3 137 aaKnown RBP4.25□□□□□ -1.73
CSDE1-209ENST00000525132 FLCNQ8NFG4 579 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 FBXO27Q8NI29 283 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 TBC1D16Q8TBP0 767 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 RAPGEF4Q8WZA2 1011 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 YIPF2Q9BWQ6 316 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 TRIM4Q9C037 500 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 KCNF1Q9H3M0 494 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 MFSD1Q9H3U5 465 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 ZCCHC17Q9NP64 241 aaKnown RBP4.25□□□□□ -1.73
CSDE1-209ENST00000525132 DDX41Q9UJV9 622 aaKnown RBP4.25□□□□□ -1.73
CSDE1-209ENST00000525132 PCOLCE2Q9UKZ9 415 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 ANKRD30AQ9BXX3 1397 aa4.25□□□□□ -1.73
CSDE1-209ENST00000525132 SCAMP3O14828 347 aaKnown RBP4.24□□□□□ -1.73
CSDE1-209ENST00000525132 USP2O75604 605 aaPredicted RBP4.24□□□□□ -1.73
CSDE1-209ENST00000525132 LEFTY1O75610 366 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 EOMESO95936 686 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 FOSL1P15407 271 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 ICAM3P32942 547 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 ZNF76P36508 570 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 CDK5R2Q13319 367 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 LRP8Q14114 963 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 CBX2Q14781 532 aaPredicted RBP4.24□□□□□ -1.73
CSDE1-209ENST00000525132 CWF19L1Q69YN2 538 aaKnown RBP4.24□□□□□ -1.73
CSDE1-209ENST00000525132 CCDC174Q6PII3 467 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 ZNF765Q7L2R6 523 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 HDXQ7Z353 690 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 REC114Q7Z4M0 266 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 ANKRD13AQ8IZ07 590 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 TMEM87AQ8NBN3 555 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 SPATA3Q8NHX4 192 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 TRIB2Q92519 343 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 ACSF2Q96CM8 615 aaPredicted RBP4.24□□□□□ -1.73
CSDE1-209ENST00000525132 PABPC5Q96DU9 382 aaKnown RBP4.24□□□□□ -1.73
CSDE1-209ENST00000525132 EAF1Q96JC9 268 aaPredicted RBP4.24□□□□□ -1.73
CSDE1-209ENST00000525132 DUSP23Q9BVJ7 150 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 MYOZ2Q9NPC6 264 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 CLDND1Q9NY35 253 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 TJP2Q9UDY2 1190 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 ADAM30Q9UKF2 790 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 CSADQ9Y600 493 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 NIPBLQ6KC79 2804 aaeCLIP4.24□□□□□ -1.73
CSDE1-209ENST00000525132 HIVEP3Q5T1R4 2406 aa4.24□□□□□ -1.73
CSDE1-209ENST00000525132 COL5A1P20908 1838 aaPredicted RBP4.23□□□□□ -1.73
CSDE1-209ENST00000525132 RLFQ13129 1914 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 MYOM3Q5VTT5 1437 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 DNM1LO00429 736 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 ADAMTS4O75173 837 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 LRIG2O94898 1065 aa4.23□□□□□ -1.73
CSDE1-209ENST00000525132 SLITRK5O94991 958 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms