RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 SQORQ9Y6N5 450 aa11.35□□□□□ -0.59
TTC39A-213ENST00000524442 KDM3AQ9Y4C1 1321 aa11.35□□□□□ -0.59
TTC39A-213ENST00000524442 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.34□□□□□ -0.59
TTC39A-213ENST00000524442 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.34□□□□□ -0.59
TTC39A-213ENST00000524442 DDX11L8A8MPP1 907 aa11.34□□□□□ -0.59
TTC39A-213ENST00000524442 SLITRK3O94933 977 aa11.34□□□□□ -0.59
TTC39A-213ENST00000524442 STBD1O95210 358 aa11.34□□□□□ -0.59
TTC39A-213ENST00000524442 XRCC6P12956 609 aaKnown RBP eCLIP11.34□□□□□ -0.59
TTC39A-213ENST00000524442 MUTP22033 750 aa11.34□□□□□ -0.59
TTC39A-213ENST00000524442 FXR2P51116 673 aaKnown RBP eCLIP11.34□□□□□ -0.59
TTC39A-213ENST00000524442 CDC42EP1Q00587 391 aa11.34□□□□□ -0.59
TTC39A-213ENST00000524442 TBC1D8BQ0IIM8 1120 aa11.34□□□□□ -0.59
TTC39A-213ENST00000524442 PTGDRQ13258 359 aa11.34□□□□□ -0.59
TTC39A-213ENST00000524442 MBTPS1Q14703 1052 aa11.34□□□□□ -0.59
TTC39A-213ENST00000524442 GPNMBQ14956 572 aa11.34□□□□□ -0.59
TTC39A-213ENST00000524442 CNKSR3Q6P9H4 555 aa11.34□□□□□ -0.59
TTC39A-213ENST00000524442 TRMT1LQ7Z2T5 733 aaKnown RBP11.34□□□□□ -0.59
TTC39A-213ENST00000524442 KIAA0319LQ8IZA0 1049 aa11.34□□□□□ -0.59
TTC39A-213ENST00000524442 USP38Q8NB14 1042 aa11.34□□□□□ -0.59
TTC39A-213ENST00000524442 APBB2Q92870 758 aa11.34□□□□□ -0.59
TTC39A-213ENST00000524442 EIF2AK1Q9BQI3 630 aaKnown RBP11.34□□□□□ -0.59
TTC39A-213ENST00000524442 FAM49AQ9H0Q0 323 aaPredicted RBP11.34□□□□□ -0.59
TTC39A-213ENST00000524442 SEPT9Q9UHD8 586 aaPredicted RBP11.34□□□□□ -0.59
TTC39A-213ENST00000524442 KAT6AQ92794 2004 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 ABHD14A-ACY1A0A1B0GW23 586 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 STX6O43752 255 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 CHRNA1P02708 482 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 CTSHP09668 335 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 YWHABP31946 246 aaKnown RBP11.33□□□□□ -0.6
TTC39A-213ENST00000524442 TECP42680 631 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 DNM2P50570 870 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 FXR1P51114 621 aaKnown RBP eCLIP11.33□□□□□ -0.6
TTC39A-213ENST00000524442 SMAD3P84022 425 aaKnown RBP11.33□□□□□ -0.6
TTC39A-213ENST00000524442 ATP2C1P98194 919 aaPredicted RBP11.33□□□□□ -0.6
TTC39A-213ENST00000524442 MGAT3Q09327 533 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 IKBKEQ14164 716 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 NBR1Q14596 966 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 PLEKHG4Q58EX7 1191 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 ARL6IP4Q66PJ3 421 aaKnown RBP11.33□□□□□ -0.6
TTC39A-213ENST00000524442 HAUS3Q68CZ6 603 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 DTHD1Q6ZMT9 781 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 ANO5Q75V66 913 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 OTOP2Q7RTS6 562 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 TPH2Q8IWU9 490 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 PHOSPHO2Q8TCD6 241 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 SEPT8Q92599 483 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 DYDC2Q96IM9 177 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 CEP89Q96ST8 783 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 MAP7D2Q96T17 732 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 POLR3CQ9BUI4 534 aaPredicted RBP11.33□□□□□ -0.6
TTC39A-213ENST00000524442 CELF4Q9BZC1 486 aaKnown RBP11.33□□□□□ -0.6
TTC39A-213ENST00000524442 ZSCAN16Q9H4T2 348 aaPredicted RBP11.33□□□□□ -0.6
TTC39A-213ENST00000524442 TUFT1Q9NNX1 390 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 CYP26B1Q9NR63 512 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 RGL1Q9NZL6 768 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 TRPV2Q9Y5S1 764 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 SLC4A7Q9Y6M7 1214 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 TANC1Q9C0D5 1861 aa11.33□□□□□ -0.6
TTC39A-213ENST00000524442 IGKV6-21A0A0C4DH24 114 aa11.32□□□□□ -0.6
TTC39A-213ENST00000524442 POTEMA6NI47 508 aa11.32□□□□□ -0.6
TTC39A-213ENST00000524442 GAS2O43903 313 aaKnown RBP11.32□□□□□ -0.6
TTC39A-213ENST00000524442 MAFO75444 373 aaPredicted RBP11.32□□□□□ -0.6
TTC39A-213ENST00000524442 RPA1P27694 616 aa11.32□□□□□ -0.6
TTC39A-213ENST00000524442 RFC5P40937 340 aa11.32□□□□□ -0.6
TTC39A-213ENST00000524442 CYP4A11Q02928 519 aa11.32□□□□□ -0.6
TTC39A-213ENST00000524442 CTTNQ14247 550 aaKnown RBP11.32□□□□□ -0.6
TTC39A-213ENST00000524442 MTERF2Q49AM1 385 aa11.32□□□□□ -0.6
TTC39A-213ENST00000524442 ODR4Q5SWX8 454 aa11.32□□□□□ -0.6
TTC39A-213ENST00000524442 EFCAB12Q6NXP0 572 aa11.32□□□□□ -0.6
TTC39A-213ENST00000524442 METTL13Q8N6R0 699 aa11.32□□□□□ -0.6
TTC39A-213ENST00000524442 LINC01465Q8N7H1 131 aa11.32□□□□□ -0.6
TTC39A-213ENST00000524442 IGSF22Q8N9C0 903 aa11.32□□□□□ -0.6
TTC39A-213ENST00000524442 SLC7A3Q8WY07 619 aa11.32□□□□□ -0.6
TTC39A-213ENST00000524442 CEP170P1Q96L14 293 aa11.32□□□□□ -0.6
TTC39A-213ENST00000524442 SLC9A7Q96T83 725 aa11.32□□□□□ -0.6
TTC39A-213ENST00000524442 ANKEF1Q9NU02 776 aa11.32□□□□□ -0.6
TTC39A-213ENST00000524442 FOXD4L1Q9NU39 408 aa11.32□□□□□ -0.6
TTC39A-213ENST00000524442 WRAP73Q9P2S5 460 aaPredicted RBP11.32□□□□□ -0.6
TTC39A-213ENST00000524442 LRWD1Q9UFC0 647 aa11.32□□□□□ -0.6
TTC39A-213ENST00000524442 MTMR6Q9Y217 621 aa11.32□□□□□ -0.6
TTC39A-213ENST00000524442 CDY2AQ9Y6F7 541 aa11.32□□□□□ -0.6
TTC39A-213ENST00000524442 MYH9P35579 1960 aaKnown RBP11.32□□□□□ -0.6
TTC39A-213ENST00000524442 TRIP12Q14669 1992 aaPredicted RBP11.32□□□□□ -0.6
TTC39A-213ENST00000524442 ZBBXA8MT70 800 aa11.31□□□□□ -0.6
TTC39A-213ENST00000524442 SPATA31C1P0DKV0 1188 aa11.31□□□□□ -0.6
TTC39A-213ENST00000524442 KCNJ6P48051 423 aa11.31□□□□□ -0.6
TTC39A-213ENST00000524442 CRYBB1P53674 252 aaPredicted RBP11.31□□□□□ -0.6
TTC39A-213ENST00000524442 RESTQ13127 1097 aa11.31□□□□□ -0.6
TTC39A-213ENST00000524442 LPIN1Q14693 890 aa11.31□□□□□ -0.6
TTC39A-213ENST00000524442 FBXO47Q5MNV8 452 aa11.31□□□□□ -0.6
TTC39A-213ENST00000524442 TSHZ1Q6ZSZ6 1077 aa11.31□□□□□ -0.6
TTC39A-213ENST00000524442 FERMT3Q86UX7 667 aa11.31□□□□□ -0.6
TTC39A-213ENST00000524442 CATSPER3Q86XQ3 398 aa11.31□□□□□ -0.6
TTC39A-213ENST00000524442 KCTD17Q8N5Z5 321 aa11.31□□□□□ -0.6
TTC39A-213ENST00000524442 DBF4BQ8NFT6 615 aa11.31□□□□□ -0.6
TTC39A-213ENST00000524442 ZBTB10Q96DT7 871 aa11.31□□□□□ -0.6
TTC39A-213ENST00000524442 NACC1Q96RE7 527 aa11.31□□□□□ -0.6
TTC39A-213ENST00000524442 IFIH1Q9BYX4 1025 aaKnown RBP11.31□□□□□ -0.6
TTC39A-213ENST00000524442 DHX33Q9H6R0 707 aaKnown RBP11.31□□□□□ -0.6
TTC39A-213ENST00000524442 SUGCTQ9HAC7 445 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms