RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 CYP17A1P05093 508 aa6.51□□□□□ -1.37
PCM1-219ENST00000523540 ZNF28P17035 718 aa6.51□□□□□ -1.37
PCM1-219ENST00000523540 ID4P47928 161 aa6.51□□□□□ -1.37
PCM1-219ENST00000523540 FNTBP49356 437 aa6.51□□□□□ -1.37
PCM1-219ENST00000523540 OCRLQ01968 901 aa6.51□□□□□ -1.37
PCM1-219ENST00000523540 SMAD4Q13485 552 aaKnown RBP6.51□□□□□ -1.37
PCM1-219ENST00000523540 SKIDA1Q1XH10 827 aa6.51□□□□□ -1.37
PCM1-219ENST00000523540 CARFQ8N187 725 aa6.51□□□□□ -1.37
PCM1-219ENST00000523540 IGDCC4Q8TDY8 1250 aa6.51□□□□□ -1.37
PCM1-219ENST00000523540 FOXRED1Q96CU9 486 aaPredicted RBP6.51□□□□□ -1.37
PCM1-219ENST00000523540 GPATCH3Q96I76 525 aa6.51□□□□□ -1.37
PCM1-219ENST00000523540 C16orf92Q96LL3 132 aa6.51□□□□□ -1.37
PCM1-219ENST00000523540 GBP4Q96PP9 640 aa6.51□□□□□ -1.37
PCM1-219ENST00000523540 TTC1Q99614 292 aa6.51□□□□□ -1.37
PCM1-219ENST00000523540 PCIF1Q9H4Z3 704 aa6.51□□□□□ -1.37
PCM1-219ENST00000523540 IFT22Q9H7X7 185 aa6.51□□□□□ -1.37
PCM1-219ENST00000523540 EMC7Q9NPA0 242 aa6.51□□□□□ -1.37
PCM1-219ENST00000523540 ASB1Q9Y576 335 aa6.51□□□□□ -1.37
PCM1-219ENST00000523540 GOLGA6L22H0YM25 854 aa6.5□□□□□ -1.37
PCM1-219ENST00000523540 PTGS1P23219 599 aa6.5□□□□□ -1.37
PCM1-219ENST00000523540 MC4RP32245 332 aa6.5□□□□□ -1.37
PCM1-219ENST00000523540 SMAD3P84022 425 aaKnown RBP6.5□□□□□ -1.37
PCM1-219ENST00000523540 SMAD2Q15796 467 aaKnown RBP6.5□□□□□ -1.37
PCM1-219ENST00000523540 ESRP1Q6NXG1 681 aaKnown RBP6.5□□□□□ -1.37
PCM1-219ENST00000523540 RTN4RL1Q86UN2 441 aaPredicted RBP6.5□□□□□ -1.37
PCM1-219ENST00000523540 ZSWIM3Q96MP5 696 aa6.5□□□□□ -1.37
PCM1-219ENST00000523540 TOMM22Q9NS69 142 aa6.5□□□□□ -1.37
PCM1-219ENST00000523540 ARHGAP28Q9P2N2 729 aa6.5□□□□□ -1.37
PCM1-219ENST00000523540 COL4A3BPQ9Y5P4 624 aa6.5□□□□□ -1.37
PCM1-219ENST00000523540 BRINP1O60477 761 aa6.49□□□□□ -1.37
PCM1-219ENST00000523540 IL18BPO95998 194 aa6.49□□□□□ -1.37
PCM1-219ENST00000523540 SARSP49591 514 aaKnown RBP6.49□□□□□ -1.37
PCM1-219ENST00000523540 SLURP1P55000 103 aa6.49□□□□□ -1.37
PCM1-219ENST00000523540 STAT4Q14765 748 aa6.49□□□□□ -1.37
PCM1-219ENST00000523540 EPHA7Q15375 998 aa6.49□□□□□ -1.37
PCM1-219ENST00000523540 PTPROQ16827 1216 aa6.49□□□□□ -1.37
PCM1-219ENST00000523540 PHF19Q5T6S3 580 aa6.49□□□□□ -1.37
PCM1-219ENST00000523540 LHFPL2Q6ZUX7 228 aa6.49□□□□□ -1.37
PCM1-219ENST00000523540 SCYL1Q96KG9 808 aa6.49□□□□□ -1.37
PCM1-219ENST00000523540 AMNQ9BXJ7 453 aa6.49□□□□□ -1.37
PCM1-219ENST00000523540 BRINP2Q9C0B6 783 aa6.49□□□□□ -1.37
PCM1-219ENST00000523540 ZMAT4Q9H898 229 aa6.49□□□□□ -1.37
PCM1-219ENST00000523540 PCDH12Q9NPG4 1184 aa6.49□□□□□ -1.37
PCM1-219ENST00000523540 INCENPQ9NQS7 918 aa6.49□□□□□ -1.37
PCM1-219ENST00000523540 UCKL1Q9NWZ5 548 aa6.49□□□□□ -1.37
PCM1-219ENST00000523540 ATP8A1Q9Y2Q0 1164 aa6.49□□□□□ -1.37
PCM1-219ENST00000523540 PRAMEF22A3QJZ6 481 aa6.48□□□□□ -1.37
PCM1-219ENST00000523540 CPEP16870 476 aa6.48□□□□□ -1.37
PCM1-219ENST00000523540 GLRBP48167 497 aa6.48□□□□□ -1.37
PCM1-219ENST00000523540 KCNC1P48547 511 aa6.48□□□□□ -1.37
PCM1-219ENST00000523540 PHC1P78364 1004 aa6.48□□□□□ -1.37
PCM1-219ENST00000523540 LRRC32Q14392 662 aa6.48□□□□□ -1.37
PCM1-219ENST00000523540 ATP13A4Q4VNC1 1196 aa6.48□□□□□ -1.37
PCM1-219ENST00000523540 GPR158Q5T848 1215 aa6.48□□□□□ -1.37
PCM1-219ENST00000523540 PRAMEF18Q5VWM3 479 aa6.48□□□□□ -1.37
PCM1-219ENST00000523540 DDX42Q86XP3 938 aaKnown RBP eCLIP6.48□□□□□ -1.37
PCM1-219ENST00000523540 PASD1Q8IV76 773 aa6.48□□□□□ -1.37
PCM1-219ENST00000523540 HIPK4Q8NE63 616 aa6.48□□□□□ -1.37
PCM1-219ENST00000523540 ZNF526Q8TF50 670 aaPredicted RBP6.48□□□□□ -1.37
PCM1-219ENST00000523540 KCND1Q9NSA2 647 aa6.48□□□□□ -1.37
PCM1-219ENST00000523540 GALNT8Q9NY28 637 aa6.48□□□□□ -1.37
PCM1-219ENST00000523540 ARHGAP20Q9P2F6 1191 aa6.48□□□□□ -1.37
PCM1-219ENST00000523540 ZFP69BQ9UJL9 534 aa6.48□□□□□ -1.37
PCM1-219ENST00000523540 APOBEC2Q9Y235 224 aaKnown RBP6.48□□□□□ -1.37
PCM1-219ENST00000523540 MYRFQ9Y2G1 1151 aa6.48□□□□□ -1.37
PCM1-219ENST00000523540 COL6A1P12109 1028 aa6.47□□□□□ -1.37
PCM1-219ENST00000523540 MLLT6P55198 1093 aaPredicted RBP6.47□□□□□ -1.37
PCM1-219ENST00000523540 PLP2Q04941 152 aa6.47□□□□□ -1.37
PCM1-219ENST00000523540 TERF2Q15554 542 aa6.47□□□□□ -1.37
PCM1-219ENST00000523540 CXXC5Q7LFL8 322 aaKnown RBP6.47□□□□□ -1.37
PCM1-219ENST00000523540 C11orf74Q86VG3 221 aa6.47□□□□□ -1.37
PCM1-219ENST00000523540 ZCRB1Q8TBF4 217 aaKnown RBP6.47□□□□□ -1.37
PCM1-219ENST00000523540 ERCC4Q92889 916 aaPredicted RBP6.47□□□□□ -1.37
PCM1-219ENST00000523540 BDH2Q9BUT1 245 aa6.47□□□□□ -1.37
PCM1-219ENST00000523540 CROTQ9UKG9 612 aa6.47□□□□□ -1.37
PCM1-219ENST00000523540 CNOT11Q9UKZ1 510 aaKnown RBP6.47□□□□□ -1.37
PCM1-219ENST00000523540 PHLDB1Q86UU1 1377 aa6.46□□□□□ -1.37
PCM1-219ENST00000523540 GPR39O43194 453 aa6.46□□□□□ -1.38
PCM1-219ENST00000523540 PRICKLE3O43900 615 aaPredicted RBP6.46□□□□□ -1.38
PCM1-219ENST00000523540 ECE1P42892 770 aa6.46□□□□□ -1.38
PCM1-219ENST00000523540 ALDH6A1Q02252 535 aaKnown RBP6.46□□□□□ -1.38
PCM1-219ENST00000523540 STILQ15468 1287 aa6.46□□□□□ -1.38
PCM1-219ENST00000523540 ZFYVE27Q5T4F4 411 aa6.46□□□□□ -1.38
PCM1-219ENST00000523540 BROXQ5VW32 411 aa6.46□□□□□ -1.38
PCM1-219ENST00000523540 LRSAM1Q6UWE0 723 aa6.46□□□□□ -1.38
PCM1-219ENST00000523540 ZNF761Q86XN6 746 aaPredicted RBP6.46□□□□□ -1.38
PCM1-219ENST00000523540 NME9Q86XW9 330 aa6.46□□□□□ -1.38
PCM1-219ENST00000523540 ZZZ3Q8IYH5 903 aa6.46□□□□□ -1.38
PCM1-219ENST00000523540 STPG3Q8N7X2 389 aa6.46□□□□□ -1.38
PCM1-219ENST00000523540 ZNF610Q8N9Z0 462 aa6.46□□□□□ -1.38
PCM1-219ENST00000523540 ATL2Q8NHH9 583 aa6.46□□□□□ -1.38
PCM1-219ENST00000523540 WDR66Q8TBY9 1149 aa6.46□□□□□ -1.38
PCM1-219ENST00000523540 ADAMTS17Q8TE56 1095 aa6.46□□□□□ -1.38
PCM1-219ENST00000523540 RTF1Q92541 710 aaKnown RBP6.46□□□□□ -1.38
PCM1-219ENST00000523540 SLC5A5Q92911 643 aa6.46□□□□□ -1.38
PCM1-219ENST00000523540 YTHDC1Q96MU7 727 aaKnown RBP6.46□□□□□ -1.38
PCM1-219ENST00000523540 FOXB1Q99853 325 aa6.46□□□□□ -1.38
PCM1-219ENST00000523540 TACO1Q9BSH4 297 aaKnown RBP6.46□□□□□ -1.38
PCM1-219ENST00000523540 MCM8Q9UJA3 840 aa6.46□□□□□ -1.38
PCM1-219ENST00000523540 A0A1B0GTL3 188 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms