RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 OATP04181 439 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 LGALS2P05162 132 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 RARBP10826 455 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 AOPEPQ8N6M6 819 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 GLIS3Q8NEA6 775 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 TRPV1Q8NER1 839 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 GSDMAQ96QA5 445 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 MAGEF1Q9HAY2 307 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 SPC25Q9HBM1 224 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 RMND1Q9NWS8 449 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 LOC102724159A0A0B4J2E5 919 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 CCDC169A6NNP5 214 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 XRCC5P13010 732 aaKnown RBP10.37□□□□□ -0.75
SDCBP-212ENST00000523483 BMP6P22004 513 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 NLRP12P59046 1061 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 STK4Q13043 487 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 PWP2Q15269 919 aaKnown RBP10.37□□□□□ -0.75
SDCBP-212ENST00000523483 ARSHQ5FYA8 562 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 XKR3Q5GH77 459 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 FAM47CQ5HY64 1035 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 HYIQ5T013 277 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 C4orf19Q8IY42 314 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 LRRC71Q8N4P6 559 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 RDM1Q8NG50 284 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 TMEM143Q96AN5 459 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 PCYT2Q99447 389 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 NAT10Q9H0A0 1025 aaKnown RBP10.37□□□□□ -0.75
SDCBP-212ENST00000523483 MRPL44Q9H9J2 332 aaKnown RBP10.37□□□□□ -0.75
SDCBP-212ENST00000523483 PLXNA1Q9UIW2 1896 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 H3BRB1 525 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 INHAP05111 366 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 GRK4P32298 578 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 TBC1D8BQ0IIM8 1120 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 DGKDQ16760 1214 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 ODR4Q5SWX8 454 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 SFR1Q86XK3 245 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 MSL3Q8N5Y2 521 aaKnown RBP10.37□□□□□ -0.75
SDCBP-212ENST00000523483 SLC7A3Q8WY07 619 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 RNPEPQ9H4A4 650 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 TUT1Q9H6E5 874 aaKnown RBP10.37□□□□□ -0.75
SDCBP-212ENST00000523483 NRBP2Q9NSY0 501 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 CTNND2Q9UQB3 1225 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 HIP1RO75146 1068 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 GCNT3O95395 438 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 HMGCRP04035 888 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 COASYQ13057 564 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 FAM26FQ5R3K3 315 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 RBM43Q6ZSC3 357 aaKnown RBP10.36□□□□□ -0.75
SDCBP-212ENST00000523483 C7orf25Q9BPX7 421 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 KIFC3Q9BVG8 833 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 SMARCAD1Q9H4L7 1026 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 XPNPEP3Q9NQH7 507 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 CYP26B1Q9NR63 512 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 WBP1LQ9NX94 342 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 ERAP1Q9NZ08 941 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 TUBE1Q9UJT0 475 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 ZNF215Q9UL58 517 aaPredicted RBP10.36□□□□□ -0.75
SDCBP-212ENST00000523483 CASP8AP2Q9UKL3 1982 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 MMP3P08254 477 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 ATP4AP20648 1035 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 FSCN1Q16658 493 aaKnown RBP10.36□□□□□ -0.75
SDCBP-212ENST00000523483 CXCL17Q6UXB2 119 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 PPTC7Q8NI37 304 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 SCLT1Q96NL6 688 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 CBX8Q9HC52 389 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 MYADML2A6NDP7 307 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 PEX3P56589 373 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 GIT2Q14161 759 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 SLC9C1Q4G0N8 1177 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 UNC13DQ70J99 1090 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 KSR1Q8IVT5 923 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 SAGE1Q9NXZ1 904 aa10.36□□□□□ -0.75
SDCBP-212ENST00000523483 PPFIA4O75335 1185 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 LBX1P52954 281 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 STIM1Q13586 685 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 CNNM4Q6P4Q7 775 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 FAM178BQ8IXR5 827 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 FAM200AQ8TCP9 573 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 DNAJC19Q96DA6 116 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 FGFBP2Q9BYJ0 223 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 PARVGQ9HBI0 331 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 CYBAP13498 195 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 CD44P16070 742 aaKnown RBP10.35□□□□□ -0.75
SDCBP-212ENST00000523483 NMT1P30419 496 aaKnown RBP10.35□□□□□ -0.75
SDCBP-212ENST00000523483 PRCPP42785 496 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 MORC3Q14149 939 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 KIAA0753Q2KHM9 967 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 FUCA2Q9BTY2 467 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 FAM49AQ9H0Q0 323 aaPredicted RBP10.35□□□□□ -0.75
SDCBP-212ENST00000523483 COL4A3BPQ9Y5P4 624 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 MAFBQ9Y5Q3 323 aaPredicted RBP10.35□□□□□ -0.75
SDCBP-212ENST00000523483 IGSF9BQ9UPX0 1349 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 TRIM49BA6NDI0 452 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 PES1O00541 588 aaKnown RBP10.35□□□□□ -0.75
SDCBP-212ENST00000523483 SEPT4O43236 478 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 KLRC4O43908 158 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 INSRRP14616 1297 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 CPT1AP50416 773 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 PLCB4Q15147 1175 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 ZNF658Q5TYW1 1059 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms