RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 GAS7O60861 476 aa12.31□□□□□ -0.44
PVT1-216ENST00000523068 CYP3A7P24462 503 aa12.31□□□□□ -0.44
PVT1-216ENST00000523068 CD52P31358 61 aa12.31□□□□□ -0.44
PVT1-216ENST00000523068 JAK3P52333 1124 aa12.31□□□□□ -0.44
PVT1-216ENST00000523068 TMEM62Q0P6H9 643 aa12.31□□□□□ -0.44
PVT1-216ENST00000523068 PAK2Q13177 524 aa12.31□□□□□ -0.44
PVT1-216ENST00000523068 NONOQ15233 471 aaKnown RBP eCLIP12.31□□□□□ -0.44
PVT1-216ENST00000523068 LRCH2Q5VUJ6 765 aa12.31□□□□□ -0.44
PVT1-216ENST00000523068 MOXD1Q6UVY6 613 aa12.31□□□□□ -0.44
PVT1-216ENST00000523068 WASF1Q92558 559 aa12.31□□□□□ -0.44
PVT1-216ENST00000523068 SLC5A5Q92911 643 aa12.31□□□□□ -0.44
PVT1-216ENST00000523068 IL17RAQ96F46 866 aa12.31□□□□□ -0.44
PVT1-216ENST00000523068 C17orf80Q9BSJ5 609 aa12.31□□□□□ -0.44
PVT1-216ENST00000523068 BACH2Q9BYV9 841 aa12.31□□□□□ -0.44
PVT1-216ENST00000523068 DISC1Q9NRI5 854 aa12.31□□□□□ -0.44
PVT1-216ENST00000523068 TPCN1Q9ULQ1 816 aa12.31□□□□□ -0.44
PVT1-216ENST00000523068 PADI3Q9ULW8 664 aa12.31□□□□□ -0.44
PVT1-216ENST00000523068 COG5Q9UP83 839 aa12.31□□□□□ -0.44
PVT1-216ENST00000523068 RWDD3Q9Y3V2 267 aa12.31□□□□□ -0.44
PVT1-216ENST00000523068 VCANP13611 3396 aa12.3□□□□□ -0.44
PVT1-216ENST00000523068 CCDC194A0A1B0GVG4 234 aa12.3□□□□□ -0.44
PVT1-216ENST00000523068 ZBTB42B2RXF5 422 aa12.3□□□□□ -0.44
PVT1-216ENST00000523068 MAGEB2O15479 319 aa12.3□□□□□ -0.44
PVT1-216ENST00000523068 ATP4AP20648 1035 aa12.3□□□□□ -0.44
PVT1-216ENST00000523068 TMOD1P28289 359 aa12.3□□□□□ -0.44
PVT1-216ENST00000523068 AK2P54819 239 aa12.3□□□□□ -0.44
PVT1-216ENST00000523068 PTPROQ16827 1216 aa12.3□□□□□ -0.44
PVT1-216ENST00000523068 EPC2Q52LR7 807 aa12.3□□□□□ -0.44
PVT1-216ENST00000523068 KRT40Q6A162 431 aa12.3□□□□□ -0.44
PVT1-216ENST00000523068 KIAA0319LQ8IZA0 1049 aa12.3□□□□□ -0.44
PVT1-216ENST00000523068 ZNF710Q8N1W2 664 aa12.3□□□□□ -0.44
PVT1-216ENST00000523068 FIBCD1Q8N539 461 aa12.3□□□□□ -0.44
PVT1-216ENST00000523068 METTL13Q8N6R0 699 aa12.3□□□□□ -0.44
PVT1-216ENST00000523068 RDM1Q8NG50 284 aa12.3□□□□□ -0.44
PVT1-216ENST00000523068 AIFM3Q96NN9 605 aa12.3□□□□□ -0.44
PVT1-216ENST00000523068 PHF20Q9BVI0 1012 aa12.3□□□□□ -0.44
PVT1-216ENST00000523068 AGO3Q9H9G7 860 aaKnown RBP12.3□□□□□ -0.44
PVT1-216ENST00000523068 NRBP2Q9NSY0 501 aa12.3□□□□□ -0.44
PVT1-216ENST00000523068 CHMP2AO43633 222 aa12.29□□□□□ -0.44
PVT1-216ENST00000523068 EDIL3O43854 480 aa12.29□□□□□ -0.44
PVT1-216ENST00000523068 RPS6KA5O75582 802 aa12.29□□□□□ -0.44
PVT1-216ENST00000523068 PSMD10O75832 226 aa12.29□□□□□ -0.44
PVT1-216ENST00000523068 C22orf31O95567 290 aa12.29□□□□□ -0.44
PVT1-216ENST00000523068 OATP04181 439 aa12.29□□□□□ -0.44
PVT1-216ENST00000523068 STAG3L1P0CL83 205 aa12.29□□□□□ -0.44
PVT1-216ENST00000523068 NPY5RQ15761 445 aa12.29□□□□□ -0.44
PVT1-216ENST00000523068 TRMT1LQ7Z2T5 733 aaKnown RBP12.29□□□□□ -0.44
PVT1-216ENST00000523068 TMEM192Q8IY95 271 aa12.29□□□□□ -0.44
PVT1-216ENST00000523068 HLA-CQ95604 372 aa12.29□□□□□ -0.44
PVT1-216ENST00000523068 MBOAT7Q96N66 472 aa12.29□□□□□ -0.44
PVT1-216ENST00000523068 NAP1L4Q99733 375 aaKnown RBP12.29□□□□□ -0.44
PVT1-216ENST00000523068 UPF2Q9HAU5 1272 aaKnown RBP12.29□□□□□ -0.44
PVT1-216ENST00000523068 DDX25Q9UHL0 483 aaKnown RBP12.29□□□□□ -0.44
PVT1-216ENST00000523068 KCNJ14Q9UNX9 436 aa12.29□□□□□ -0.44
PVT1-216ENST00000523068 GINS2Q9Y248 185 aa12.29□□□□□ -0.44
PVT1-216ENST00000523068 KIAA1671Q9BY89 1806 aa12.29□□□□□ -0.44
PVT1-216ENST00000523068 ADGRA3Q8IWK6 1321 aa12.29□□□□□ -0.44
PVT1-216ENST00000523068 TCF20Q9UGU0 1960 aaKnown RBP12.29□□□□□ -0.44
PVT1-216ENST00000523068 FNDC1Q4ZHG4 1894 aaPredicted RBP12.28□□□□□ -0.44
PVT1-216ENST00000523068 H3BNC9 293 aa12.28□□□□□ -0.44
PVT1-216ENST00000523068 RBAK-RBAKDNI3L0D1 243 aa12.28□□□□□ -0.44
PVT1-216ENST00000523068 GPR182O15218 404 aa12.28□□□□□ -0.44
PVT1-216ENST00000523068 TDP2O95551 362 aa12.28□□□□□ -0.44
PVT1-216ENST00000523068 RB1P06400 928 aa12.28□□□□□ -0.44
PVT1-216ENST00000523068 CRYBB1P53674 252 aaPredicted RBP12.28□□□□□ -0.44
PVT1-216ENST00000523068 PRKCEQ02156 737 aa12.28□□□□□ -0.44
PVT1-216ENST00000523068 NFX1Q12986 1120 aaKnown RBP12.28□□□□□ -0.44
PVT1-216ENST00000523068 GPM6BQ13491 265 aa12.28□□□□□ -0.44
PVT1-216ENST00000523068 BTG3Q14201 252 aaPredicted RBP12.28□□□□□ -0.44
PVT1-216ENST00000523068 INF2Q27J81 1249 aa12.28□□□□□ -0.44
PVT1-216ENST00000523068 LETM2Q2VYF4 491 aa12.28□□□□□ -0.44
PVT1-216ENST00000523068 C8orf34Q49A92 452 aa12.28□□□□□ -0.44
PVT1-216ENST00000523068 MIER3Q7Z3K6 550 aa12.28□□□□□ -0.44
PVT1-216ENST00000523068 NPAS4Q8IUM7 802 aa12.28□□□□□ -0.44
PVT1-216ENST00000523068 MRPL38Q96DV4 380 aaKnown RBP12.28□□□□□ -0.44
PVT1-216ENST00000523068 MAP7D2Q96T17 732 aa12.28□□□□□ -0.44
PVT1-216ENST00000523068 UNC45AQ9H3U1 944 aa12.28□□□□□ -0.44
PVT1-216ENST00000523068 BRMS1Q9HCU9 246 aa12.28□□□□□ -0.44
PVT1-216ENST00000523068 ORC3Q9UBD5 711 aaPredicted RBP12.28□□□□□ -0.44
PVT1-216ENST00000523068 LRFN2Q9ULH4 789 aa12.28□□□□□ -0.44
PVT1-216ENST00000523068 XIRP2A4UGR9 3374 aa12.28□□□□□ -0.44
PVT1-216ENST00000523068 DENND3A2RUS2 1198 aa12.27□□□□□ -0.45
PVT1-216ENST00000523068 ZNF862O60290 1169 aa12.27□□□□□ -0.45
PVT1-216ENST00000523068 DGKIO75912 1065 aa12.27□□□□□ -0.45
PVT1-216ENST00000523068 GCFC2P16383 781 aaKnown RBP12.27□□□□□ -0.45
PVT1-216ENST00000523068 NEK4P51957 841 aa12.27□□□□□ -0.45
PVT1-216ENST00000523068 TIGD5Q53EQ6 642 aa12.27□□□□□ -0.45
PVT1-216ENST00000523068 PPP4R3AQ6IN85 833 aa12.27□□□□□ -0.45
PVT1-216ENST00000523068 EFCAB12Q6NXP0 572 aa12.27□□□□□ -0.45
PVT1-216ENST00000523068 NEK8Q86SG6 692 aa12.27□□□□□ -0.45
PVT1-216ENST00000523068 ETNPPLQ8TBG4 499 aa12.27□□□□□ -0.45
PVT1-216ENST00000523068 LINC01599Q8WXQ3 324 aa12.27□□□□□ -0.45
PVT1-216ENST00000523068 GTF3C6Q969F1 213 aa12.27□□□□□ -0.45
PVT1-216ENST00000523068 ZNF689Q96CS4 500 aaPredicted RBP12.27□□□□□ -0.45
PVT1-216ENST00000523068 FAM20AQ96MK3 541 aa12.27□□□□□ -0.45
PVT1-216ENST00000523068 C11orf84Q9BUA3 381 aaPredicted RBP12.27□□□□□ -0.45
PVT1-216ENST00000523068 RC3H2Q9HBD1 1191 aaKnown RBP12.27□□□□□ -0.45
PVT1-216ENST00000523068 ERVK-5Q9HDB9 667 aa12.27□□□□□ -0.45
PVT1-216ENST00000523068 C1orf112Q9NSG2 853 aa12.27□□□□□ -0.45
PVT1-216ENST00000523068 FOXD4L1Q9NU39 408 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms