RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 FAM189BP81408 668 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 KRT32Q14532 448 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 PKN1Q16512 942 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 RTN1Q16799 776 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 FAM160B1Q5W0V3 765 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 ZNF746Q6NUN9 644 aaPredicted RBP10.7□□□□□ -0.7
SDC2-207ENST00000522911 TMEM184AQ6ZMB5 413 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 SLC24A5Q71RS6 500 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 DHX32Q7L7V1 743 aaKnown RBP10.7□□□□□ -0.7
SDC2-207ENST00000522911 KIAA0319LQ8IZA0 1049 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 KLHL23Q8NBE8 558 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 RASGRP4Q8TDF6 673 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 NEK1Q96PY6 1258 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 ZMYND12Q9H0C1 365 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 FAM49AQ9H0Q0 323 aaPredicted RBP10.7□□□□□ -0.7
SDC2-207ENST00000522911 ERVK-5Q9HDB9 667 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 FAM217BQ9NTX9 383 aaPredicted RBP10.7□□□□□ -0.7
SDC2-207ENST00000522911 TBC1D22BQ9NU19 505 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 LZTS1Q9Y250 596 aa10.7□□□□□ -0.7
SDC2-207ENST00000522911 MAFBQ9Y5Q3 323 aaPredicted RBP10.7□□□□□ -0.7
SDC2-207ENST00000522911 ZNF318Q5VUA4 2279 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 CCDC196A0A1B0GTZ2 297 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 hCG_1642624A0A1W2PR95 340 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 SMCO2A6NFE2 343 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 LOC730098B7Z3J9 87 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 FAM86B1E9PN63 330 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 IPO5O00410 1097 aaKnown RBP10.69□□□□□ -0.7
SDC2-207ENST00000522911 GPR182O15218 404 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 RPS6KA5O75582 802 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 CCNE2O96020 404 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 FAM86B2P0C5J1 330 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 ATF7P17544 494 aaPredicted RBP10.69□□□□□ -0.7
SDC2-207ENST00000522911 KLRC1P26715 233 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 CRYBB1P53674 252 aaPredicted RBP10.69□□□□□ -0.7
SDC2-207ENST00000522911 SETQ01105 290 aaPredicted RBP10.69□□□□□ -0.7
SDC2-207ENST00000522911 PFKFB3Q16875 520 aaPredicted RBP10.69□□□□□ -0.7
SDC2-207ENST00000522911 CCDC60Q8IWA6 550 aaPredicted RBP10.69□□□□□ -0.7
SDC2-207ENST00000522911 SMAP1Q8IYB5 467 aaPredicted RBP10.69□□□□□ -0.7
SDC2-207ENST00000522911 CCDC82Q8N4S0 544 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 TRAPPC12Q8WVT3 735 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 POF1BQ8WVV4 589 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 BBXQ8WY36 941 aaPredicted RBP10.69□□□□□ -0.7
SDC2-207ENST00000522911 RSPH1Q8WYR4 309 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 EDAQ92838 391 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 KCNB2Q92953 911 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 MFSD14AQ96MC6 490 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 YTHDC1Q96MU7 727 aaKnown RBP10.69□□□□□ -0.7
SDC2-207ENST00000522911 ALG13Q9NP73 1137 aaKnown RBP10.69□□□□□ -0.7
SDC2-207ENST00000522911 ANO2Q9NQ90 1003 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 AAASQ9NRG9 546 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 CLEC1BQ9P126 229 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 BRPF3Q9ULD4 1205 aa10.69□□□□□ -0.7
SDC2-207ENST00000522911 V9GY48 417 aaPredicted RBP10.69□□□□□ -0.7
SDC2-207ENST00000522911 MGEA5O60502 916 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 C22orf31O95567 290 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 GLP2RO95838 553 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 ATP4AP20648 1035 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 CIITAP33076 1130 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 PLCB3Q01970 1234 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 KCNC3Q14003 757 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 DSC3Q14574 896 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 MIS18BP1Q6P0N0 1132 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 PDXDC2PQ6P474 469 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 RNF135Q8IUD6 432 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 LINC01465Q8N7H1 131 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 CCDC12Q8WUD4 166 aaPredicted RBP10.68□□□□□ -0.7
SDC2-207ENST00000522911 SUSD6Q92537 303 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 ZBTB10Q96DT7 871 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 LRRC2Q9BYS8 371 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 AGXT2Q9BYV1 514 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 ZNF302Q9NR11 478 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 TMEM161AQ9NX61 479 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 PKD2L1Q9P0L9 805 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 CEP131Q9UPN4 1083 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 NOC2LQ9Y3T9 749 aaKnown RBP10.68□□□□□ -0.7
SDC2-207ENST00000522911 PCDHB7Q9Y5E2 793 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 PCDHB12Q9Y5F1 795 aa10.68□□□□□ -0.7
SDC2-207ENST00000522911 FSCN2O14926 492 aa10.67□□□□□ -0.7
SDC2-207ENST00000522911 MAGEB2O15479 319 aa10.67□□□□□ -0.7
SDC2-207ENST00000522911 LINC01565O15544 149 aa10.67□□□□□ -0.7
SDC2-207ENST00000522911 HOXA2O43364 376 aa10.67□□□□□ -0.7
SDC2-207ENST00000522911 GPR32O75388 356 aa10.67□□□□□ -0.7
SDC2-207ENST00000522911 CDC27P30260 824 aa10.67□□□□□ -0.7
SDC2-207ENST00000522911 GTF2F1P35269 517 aaKnown RBP eCLIP10.67□□□□□ -0.7
SDC2-207ENST00000522911 NDUFV1P49821 464 aa10.67□□□□□ -0.7
SDC2-207ENST00000522911 TMEM62Q0P6H9 643 aa10.67□□□□□ -0.7
SDC2-207ENST00000522911 EP400NLQ6ZTU2 488 aa10.67□□□□□ -0.7
SDC2-207ENST00000522911 HFE2Q6ZVN8 426 aa10.67□□□□□ -0.7
SDC2-207ENST00000522911 PLA2G4DQ86XP0 818 aa10.67□□□□□ -0.7
SDC2-207ENST00000522911 TMEM40Q8WWA1 233 aa10.67□□□□□ -0.7
SDC2-207ENST00000522911 FAM167AQ96KS9 214 aa10.67□□□□□ -0.7
SDC2-207ENST00000522911 PRRX2Q99811 253 aa10.67□□□□□ -0.7
SDC2-207ENST00000522911 ADAM2Q99965 735 aa10.67□□□□□ -0.7
SDC2-207ENST00000522911 PHF7Q9BWX1 381 aaPredicted RBP10.67□□□□□ -0.7
SDC2-207ENST00000522911 CDHR5Q9HBB8 845 aa10.67□□□□□ -0.7
SDC2-207ENST00000522911 TLR9Q9NR96 1032 aa10.67□□□□□ -0.7
SDC2-207ENST00000522911 LRFN2Q9ULH4 789 aa10.67□□□□□ -0.7
SDC2-207ENST00000522911 ST3GAL5Q9UNP4 418 aa10.67□□□□□ -0.7
SDC2-207ENST00000522911 PCDHA10Q9Y5I2 948 aa10.67□□□□□ -0.7
SDC2-207ENST00000522911 KIAA1671Q9BY89 1806 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms