RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 GPR20Q99678 358 aa16.71■□□□□ 0.27
CSGALNACT1-211ENST00000522854 IFNKQ9P0W0 207 aa16.71■□□□□ 0.27
CSGALNACT1-211ENST00000522854 GJD2Q9UKL4 321 aa16.71■□□□□ 0.27
CSGALNACT1-211ENST00000522854 NKRFO15226 690 aaKnown RBP eCLIP16.7■□□□□ 0.26
CSGALNACT1-211ENST00000522854 NMT1P30419 496 aaKnown RBP16.7■□□□□ 0.26
CSGALNACT1-211ENST00000522854 CCDC173Q0VFZ6 552 aa16.7■□□□□ 0.26
CSGALNACT1-211ENST00000522854 MAPK7Q13164 816 aa16.7■□□□□ 0.26
CSGALNACT1-211ENST00000522854 ZNF467Q7Z7K2 595 aaPredicted RBP16.7■□□□□ 0.26
CSGALNACT1-211ENST00000522854 MYCT1Q8N699 235 aa16.7■□□□□ 0.26
CSGALNACT1-211ENST00000522854 SCFD1Q8WVM8 642 aa16.7■□□□□ 0.26
CSGALNACT1-211ENST00000522854 CEP170P1Q96L14 293 aa16.7■□□□□ 0.26
CSGALNACT1-211ENST00000522854 TRIM47Q96LD4 638 aa16.7■□□□□ 0.26
CSGALNACT1-211ENST00000522854 PPP1R9BQ96SB3 815 aa16.7■□□□□ 0.26
CSGALNACT1-211ENST00000522854 DBR1Q9UK59 544 aaKnown RBP16.7■□□□□ 0.26
CSGALNACT1-211ENST00000522854 MAFBQ9Y5Q3 323 aaPredicted RBP16.7■□□□□ 0.26
CSGALNACT1-211ENST00000522854 NOP56O00567 594 aaKnown RBP16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 PSMA7O14818 248 aa16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 TRPA1O75762 1119 aa16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 FAM13AO94988 1023 aa16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 ZNF18P17022 549 aa16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 SMPD1P17405 629 aa16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 IRX5P78411 483 aaPredicted RBP16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 FANCCQ00597 558 aa16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 MTERF2Q49AM1 385 aa16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 ZC2HC1CQ53FD0 456 aaPredicted RBP16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 TTI2Q6NXR4 508 aa16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 USP6NLQ92738 828 aa16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 P2RX5Q93086 422 aa16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 NAP1L5Q96NT1 182 aaPredicted RBP16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 DUSP9Q99956 384 aaKnown RBP16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 XPO4Q9C0E2 1151 aaKnown RBP16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 GABRQQ9UN88 632 aa16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 IGKV6D-21A0A0A0MT36 114 aa16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 PRPF6O94906 941 aaKnown RBP16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 PSMC4P43686 418 aa16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 VEGFBP49765 207 aa16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 ARHGAP1Q07960 439 aa16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 STIM1Q13586 685 aa16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 ACVR2BQ13705 512 aa16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 TPD52L1Q16890 204 aaPredicted RBP16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 CCDC144BQ3MJ40 725 aa16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 KCTD17Q8N5Z5 321 aa16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 SEPT1Q8WYJ6 367 aa16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 MRPL44Q9H9J2 332 aaKnown RBP16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 VTA1Q9NP79 307 aa16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 DIS3Q9Y2L1 958 aaKnown RBP16.69■□□□□ 0.26
CSGALNACT1-211ENST00000522854 HOXD13P35453 343 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 STAT5BP51692 787 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 TPM4P67936 248 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 PSMD2Q13200 908 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 SARM1Q6SZW1 724 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 MYOCDQ8IZQ8 938 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 FIZ1Q96SL8 496 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 PARVGQ9HBI0 331 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 LOC102724159A0A0B4J2E5 919 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 GCNT3O95395 438 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 SERPINC1P01008 464 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 OATP04181 439 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 CDK11BP21127 795 aaKnown RBP16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 CCNE1P24864 410 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 GUCY2CP25092 1073 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 LACTBP83111 547 aaPredicted RBP16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 PWP2Q15269 919 aaKnown RBP16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 ODR4Q5SWX8 454 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 FAM102BQ5T8I3 360 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 CDKAL1Q5VV42 579 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 KCNV1Q6PIU1 500 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 IRF2BP1Q8IU81 584 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 GUF1Q8N442 669 aaKnown RBP16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 AFG1LQ8WV93 481 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 GLG1Q92896 1179 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 ZBTB10Q96DT7 871 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 DHTKD1Q96HY7 919 aaPredicted RBP16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 SRRTQ9BXP5 876 aaKnown RBP16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 CYP26B1Q9NR63 512 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 NRBP1Q9UHY1 535 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 COL4A3BPQ9Y5P4 624 aa16.68■□□□□ 0.26
CSGALNACT1-211ENST00000522854 RBAK-RBAKDNI3L0D1 243 aa16.67■□□□□ 0.26
CSGALNACT1-211ENST00000522854 PPP1R13LQ8WUF5 828 aa16.67■□□□□ 0.26
CSGALNACT1-211ENST00000522854 KIFC3Q9BVG8 833 aa16.67■□□□□ 0.26
CSGALNACT1-211ENST00000522854 ABHD16BQ9H3Z7 469 aa16.67■□□□□ 0.26
CSGALNACT1-211ENST00000522854 ANKEF1Q9NU02 776 aa16.67■□□□□ 0.26
CSGALNACT1-211ENST00000522854 INTS13Q9NVM9 706 aa16.67■□□□□ 0.26
CSGALNACT1-211ENST00000522854 RBM47A0AV96 593 aaKnown RBP16.66■□□□□ 0.26
CSGALNACT1-211ENST00000522854 ZNF286BP0CG31 522 aa16.66■□□□□ 0.26
CSGALNACT1-211ENST00000522854 ZNF131P52739 623 aa16.66■□□□□ 0.26
CSGALNACT1-211ENST00000522854 XKR3Q5GH77 459 aa16.66■□□□□ 0.26
CSGALNACT1-211ENST00000522854 CT47A1Q5JQC4 288 aaPredicted RBP16.66■□□□□ 0.26
CSGALNACT1-211ENST00000522854 CENPPQ6IPU0 288 aa16.66■□□□□ 0.26
CSGALNACT1-211ENST00000522854 APTXQ7Z2E3 356 aaKnown RBP16.66■□□□□ 0.26
CSGALNACT1-211ENST00000522854 CSGALNACT2Q8N6G5 542 aa16.66■□□□□ 0.26
CSGALNACT1-211ENST00000522854 XPNPEP1Q9NQW7 623 aa16.66■□□□□ 0.26
CSGALNACT1-211ENST00000522854 HOXC6P09630 235 aa16.66■□□□□ 0.26
CSGALNACT1-211ENST00000522854 RGS2P41220 211 aa16.66■□□□□ 0.26
CSGALNACT1-211ENST00000522854 UBASH3AP57075 661 aa16.66■□□□□ 0.26
CSGALNACT1-211ENST00000522854 COBLL1Q53SF7 1204 aa16.66■□□□□ 0.26
CSGALNACT1-211ENST00000522854 OLFML2BQ68BL8 750 aa16.66■□□□□ 0.26
CSGALNACT1-211ENST00000522854 EPM2AIP1Q7L775 607 aaPredicted RBP16.66■□□□□ 0.26
CSGALNACT1-211ENST00000522854 OTUD6AQ7L8S5 288 aa16.66■□□□□ 0.26
CSGALNACT1-211ENST00000522854 TRAPPC12Q8WVT3 735 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms